Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_O08
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.7  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   8.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.9  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.9  

>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 575 TRRLSAKENGLRRWLEQRLPQSQLRE 498
           TR+ S +ENGL R L      +QL E
Sbjct: 124 TRKSSQQENGLPRRLRTAYTNTQLLE 149


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -3

Query: 593 IILAVITRRLSAKENGLRRWLEQRLPQSQLRERSAHRNA 477
           IIL  +  +  AK N   ++++++L     +ER+  +NA
Sbjct: 95  IILGSLKTKEWAKLNNKFQYIDEKLKTRDQKERNLFKNA 133


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 632 FICVNFFKMYTFYIILA 582
           FIC+  F+  TF+II+A
Sbjct: 302 FICLLPFRALTFWIIVA 318


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 653 MSDFIYLFICVNFFKMY 603
           ++ F++L IC ++ K+Y
Sbjct: 13  IAGFLFLLICDSYLKIY 29


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -3

Query: 467 KLKHHRCTMKALKRHKLTELQGQVRHEKQEPQLEHR 360
           KLK     +K +      E + Q RH++Q+ + + +
Sbjct: 60  KLKKELRAVKEINEQARREREEQERHKQQQQEKQQK 95


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 649 LILFIYLFALISLKC 605
           L LF+Y+F  +S+ C
Sbjct: 133 LQLFLYIFTYLSVTC 147


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 317 ERQLQLHRQ*YRELPRRVLLVQQQN 243
           E + + HR  Y   PRR+ + Q  N
Sbjct: 99  ELEREFHRSKYLCRPRRIQMAQNLN 123


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 317 ERQLQLHRQ*YRELPRRVLLVQQQN 243
           E + + HR  Y   PRR+ + Q  N
Sbjct: 119 ELEREFHRSKYLCRPRRIQMAQNLN 143


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -3

Query: 467 KLKHHRCTMKALKRHKLTELQGQVRHEKQEPQLEHR 360
           KLK     +K +      E + Q RH++Q+ + + +
Sbjct: 211 KLKKELRAVKEINEQARREREEQERHKQQQQEKQQK 246


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -3

Query: 467 KLKHHRCTMKALKRHKLTELQGQVRHEKQEPQLEHR 360
           KLK     +K +      E + Q RH++Q+ + + +
Sbjct: 270 KLKKELRAVKEINEQARREREEQERHKQQQQEKQQK 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,915
Number of Sequences: 336
Number of extensions: 2113
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)