Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_O06
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40419-2|AAK67217.1| 269|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 36 0.015
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 32 0.24
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical pr... 30 0.95
AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kin... 30 0.95
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 30 1.3
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 30 1.3
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 29 1.7
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 1.7
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 1.7
AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine re... 29 2.2
AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical ... 29 2.9
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 2.9
Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical pr... 28 3.9
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 28 3.9
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 28 3.9
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 28 5.1
AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and cap... 28 5.1
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical pr... 27 6.7
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 27 6.7
U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical p... 27 6.7
AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine re... 27 6.7
Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical pr... 27 8.9
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 27 8.9
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 27 8.9
>U40419-2|AAK67217.1| 269|Caenorhabditis elegans Hypothetical
protein C27F2.5 protein.
Length = 269
Score = 105 bits (253), Expect = 2e-23
Identities = 49/86 (56%), Positives = 60/86 (69%)
Frame = +1
Query: 193 RRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNA 372
RRR GV AIQK + K+ KG ++ Q Q S+QLE LE FA +H+ EIKKN+
Sbjct: 4 RRRIGVAAIQKKQETANKFAAKGDQMAGEQLVQFSQQLEQLSAGLEMFAQRHRDEIKKNS 63
Query: 373 QFRRQFQEMCAAIGVDPLASGKGFWS 450
QFRR FQEMCA++GVDPLAS KGFW+
Sbjct: 64 QFRRHFQEMCASVGVDPLASSKGFWA 89
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +1
Query: 151 SNVIIHFNTIQPKMRRRAGVGAIQKHRLEQE---KYKEKGTEIQENQFQQMSKQLEVFRE 321
+N I F Q + RAG I + + + +YKE+ T ENQ Q ++E +
Sbjct: 528 TNATIEF---QSQQLDRAGNMLITEQEIRNQTSVQYKER-TSALENQLSQKDAEIENLKR 583
Query: 322 NLEDFASKHKSEIKK 366
+L+ +KH+SE+K+
Sbjct: 584 DLQQLVTKHESELKE 598
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/61 (22%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = +1
Query: 220 QKHRLEQEKYKEKGTEI--QENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQFQ 393
Q+H+ + E+Y+++ EI +E + +Q +++ E ++ +DF + + ++++ + ++Q Q
Sbjct: 203 QRHKQQLEEYEKRNQEILRREEEIKQQNQERE--KQINDDFEKRKQEKLQREEEMKQQNQ 260
Query: 394 E 396
E
Sbjct: 261 E 261
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical protein
F01G4.3 protein.
Length = 1266
Score = 31.1 bits (67), Expect = 0.55
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 259 GTEIQ---ENQFQQMSKQLEVFRENLEDFASKHKSEIKK-NAQFRRQFQEMCAAIGVDPL 426
G E+Q + F ++S+ ++ LE ASKHKS+I + R E+ V
Sbjct: 1141 GREMQFGGDTVFGEISESVKSVLTRLESVASKHKSQISDLGCEIRFDLMEV-----VYEW 1195
Query: 427 ASGKGFWSVLDYTSCR 474
A+G F+ +++ T C+
Sbjct: 1196 ANGTPFYQIMEMTDCQ 1211
>Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical
protein T04C10.1 protein.
Length = 882
Score = 30.3 bits (65), Expect = 0.95
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 181 QPKMRRRAGVGAIQKHRLE-QEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSE 357
QP+ +++ Q+ +LE Q+K + ++Q+ Q QQ +Q + R+++ S +
Sbjct: 750 QPQQQQQQQYQQTQRTQLEQQQKQAQLQQQLQQQQMQQQQQQQQQ-RQHMPQAQSSSQQH 808
Query: 358 IKKNAQFRRQFQ 393
++ A+ R+Q Q
Sbjct: 809 LQSRARPRQQDQ 820
>AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kinase
protein.
Length = 882
Score = 30.3 bits (65), Expect = 0.95
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 181 QPKMRRRAGVGAIQKHRLE-QEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSE 357
QP+ +++ Q+ +LE Q+K + ++Q+ Q QQ +Q + R+++ S +
Sbjct: 750 QPQQQQQQQYQQTQRTQLEQQQKQAQLQQQLQQQQMQQQQQQQQQ-RQHMPQAQSSSQQH 808
Query: 358 IKKNAQFRRQFQ 393
++ A+ R+Q Q
Sbjct: 809 LQSRARPRQQDQ 820
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 373 EHSSLFHSCVLMQNLPNFP*TLPVVSTSAGIGFLVFLCPFLYISLVPICVFGLHL 209
EH+ S ++ + LPN + S +G +CPF + +++P+ +F + L
Sbjct: 136 EHACSVPSLMMGETLPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVAL 190
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = +1
Query: 178 IQPKMRRRAGVGAIQ--KHRLEQEKYKEKGTEIQ----ENQFQQMSKQLEVFRENLEDFA 339
++ + +RR + I+ ++ LE EK + G ENQ ++ +QLEV E++
Sbjct: 1582 VEAEEKRRGLLKQIRDLENELENEKRGKSGAVSHRKKIENQIGELEQQLEVANRLKEEY- 1640
Query: 340 SKHKSEIKKNAQFRRQFQEMC 402
++KKN Q +++Q C
Sbjct: 1641 ---NKQLKKNQQIIKEYQIEC 1658
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = +1
Query: 151 SNVIIHFNTIQPKMRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLE 330
+N IIH T++PKMR + A+ +Y E ++ + + L E
Sbjct: 482 NNSIIH--TVKPKMRSNVILQAMLPVVNTHAEYHANQFEAYAHRIEALRNCLAAIFEGKV 539
Query: 331 DFASKHKSEIKKNAQFRRQFQEMC 402
FASK +K + +F E+C
Sbjct: 540 AFASKSLDAVKSSMRFAPLRIELC 563
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1
Query: 369 ILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQS 229
ILL F L F F K+ + ++L +V L CALF I + F S
Sbjct: 138 ILLVFVLGFLALKSGFFGKNANIMAYVLLIVILPICALFQILIQFVS 184
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1
Query: 369 ILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQS 229
ILL F L F F K+ + ++L +V L CALF I + F S
Sbjct: 138 ILLVFVLGFLALKSGFFGKNANIMAYVLLIVILPICALFQILIQFVS 184
>AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine
receptor, class h protein23 protein.
Length = 321
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 318 PKHFQLFRHLLELVFL--YFCALFFIFLLFQSVFLDCTY 208
P F++F H + V L YF ALF +F + VF+ Y
Sbjct: 8 PLIFRIFTHSIHFVSLPTYFLALFSLFFIKSKVFVTYRY 46
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Frame = -2
Query: 365 FFISLLCFDA-------KSSKFSLNTSSCFDICWNWFSCISVPFSLYFSCSNLCFWIA 213
FF+ L DA K++ N S+ F C N S + VPFS Y S S + WIA
Sbjct: 148 FFVILTSHDAHRFQEEHKATFLKQNPSAHFLTCEN--SYLFVPFSDYVSTSIMILWIA 203
>AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical
protein Y105C5B.8 protein.
Length = 447
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -1
Query: 363 LYFTLVF*CKIFQIFPKHFQLFRHLLELV--FLYFCALFFIFLLFQSVFLD 217
++F L + + F FQ +R V YFCA F IF SV+ D
Sbjct: 113 IFFQLFYIAVVLNTFMAKFQFWRSNENFVRGVAYFCAFFSIFEPLPSVYKD 163
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/57 (17%), Positives = 37/57 (64%)
Frame = +1
Query: 214 AIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRR 384
+I+ +++++ K++ T++++ + Q+M K + +NL++ + HK+ + +++ ++
Sbjct: 839 SIRNSQIQEDLVKQENTKLRD-ELQEMQKMSKKRSQNLDELENMHKTLLVDHSRLQQ 894
>Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical
protein F21C3.6 protein.
Length = 186
Score = 28.3 bits (60), Expect = 3.9
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 235 EQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQFQEMCAAIG 414
E+ K+++K EI+ +++++QLE R E +K K+E +K +FR++ QE+ +
Sbjct: 38 ERTKWRKKRREIE---LKKVAEQLEQHRIREEAELAKRKTENQKK-EFRKR-QEIFEKVF 92
Query: 415 VDPLASGKGFWSVL-DYTSCR 474
D + K +V+ DY R
Sbjct: 93 QDAESGQKAVENVMSDYRESR 113
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +1
Query: 166 HFNTIQPKMRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLE 330
H ++ K+R+ + + RL+Q + + K +++ + +KQLE RE +
Sbjct: 121 HVAELEQKLRKEMSLTRKYEQRLQQLESQLKNNSASDSKMELANKQLEAEREQFK 175
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 236 NKRNIKKRAQKYKKTNSSRCRNNWKCLGK 322
NK+N KK Q YK+T + C+ KCL K
Sbjct: 629 NKKNAKKMEQ-YKRTLQTGCQRYDKCLRK 656
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 220 QKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNA---QFRRQF 390
+K ++E EK KEK + +EN ++ K+ E E A + + +K + RRQ
Sbjct: 382 KKTKMEMEKEKEKTRKKEENNKRKEKKEAEKLLERSYKRAEQARVRYEKTGIRLEKRRQL 441
Query: 391 QE 396
+E
Sbjct: 442 EE 443
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 217 IQKHRLEQEKYKEKGTEIQ-ENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQFQ 393
+Q+ +Q K K E+Q + ++M KQL+ ED K + NA ++ +
Sbjct: 151 LQRKSCDQNKEKFTALELQLQETNERMQKQLDELNAKFEDVNRKLQKASDCNADTEKENE 210
Query: 394 EMCAAIGVD 420
E + G D
Sbjct: 211 EGVSDNGTD 219
>AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 4 protein.
Length = 756
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -2
Query: 257 FSLYFSCSNLCFWIAPTPARRRIFGCIVLKCIITLLIVRY*ELI*VHVIIYY 102
F +YF C CF + P+P R+ L C R+ E V IIY+
Sbjct: 390 FCIYFICVTSCFLLRPSPFERQQHIANDLICFYDFKTRRFNESA-VSTIIYH 440
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = -1
Query: 522 PMFQILDSLVKAA*MISTTCVIKNRPESFPRSQWIHTDGSTHFLKLPSELSILLY 358
P ++++ ++ A+ S T + + + E+ R W+ T+ TH L + + +Y
Sbjct: 1085 PSYELIRAMENAS--SSVTDIAQMKLENMVRLDWVSTEDGTHMLTVGMGTKVYIY 1137
>Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical
protein C08B11.8 protein.
Length = 503
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 384 PSELSILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFI-FLLFQS 229
P ++S +L + F I +++ Q F H+ +L +F + FI FLL+ S
Sbjct: 441 PRKISHILTILIGFAICILELYGPSNQRFPHIYQLANAFFSCVHFIYFLLYLS 493
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = +1
Query: 217 IQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQ 387
I K + EQ+ K+K E ++ ++ + ++ + E+ +K K E + A+ R+
Sbjct: 290 IIKFKKEQQAKKDKAKEDKQRAIREKQEAIDREKREKEEAEAKQKEEADRKAKEERE 346
>U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical
protein K06C4.8 protein.
Length = 355
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/37 (27%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 309 FQLFRHLLELVFLYFCA-LFFIFLLFQSVFLDCTYTC 202
F++ H+ ++ +++ A FFI+L+F + + TC
Sbjct: 281 FKIIHHISNVLLVFYSASTFFIYLIFSEKYRNVLSTC 317
>AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein21 protein.
Length = 330
Score = 27.5 bits (58), Expect = 6.7
Identities = 20/87 (22%), Positives = 36/87 (41%)
Frame = -1
Query: 405 STHFLKLPSELSILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQSV 226
S HF+ +P + LY + +F + L H+ E +F + FF+ +
Sbjct: 17 SIHFISIPI-YCLALYSLIFIKSNVFTTY--RIFLIWHVSENIFFEMYSAFFLAPALHAP 73
Query: 225 FLDCTYTCAASHFWLYCIKVYYYVANS 145
F+ T SHF + + +Y + S
Sbjct: 74 FVVMRTTGILSHFGINSLVQFYILTFS 100
>Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical
protein F28D1.2 protein.
Length = 268
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 178 IQPKMRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSE 357
I P+ R + A+ E +K K E Q +K EV+ + LE+ KH+ E
Sbjct: 137 IPPEGVLRLTINALDSAARESKK-KTMAIESLTKQVDDANKLTEVYMKRLEELEDKHRFE 195
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 8/44 (18%)
Frame = -1
Query: 294 HLLELVFLY--FCALFFIF------LLFQSVFLDCTYTCAASHF 187
HL++L L F LF+ F +LF FL+C +TC + +F
Sbjct: 216 HLVQLTRLNSAFLCLFYKFSNIPNCVLFLHFFLNCNFTCKSKYF 259
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 184 PKMRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIK 363
PK+ + +QKHR Q+++ + ++E +FQ+ E +E+ + + E+
Sbjct: 373 PKIIEKLAQRRLQKHREHQDEFSRRELTLRE-EFQKKLDVTEGDMRKVEEGLAAREREVH 431
Query: 364 KN 369
+N
Sbjct: 432 EN 433
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,903,862
Number of Sequences: 27780
Number of extensions: 297902
Number of successful extensions: 1229
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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