Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_O05
         (333 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q41I43 Cluster: Integral membrane protein TerC; n=1; Ex...    38   0.059
UniRef50_Q4DPA9 Cluster: Chloride channel protein, putative; n=2...    33   1.3  
UniRef50_Q4DTU7 Cluster: Putative uncharacterized protein; n=2; ...    31   3.9  
UniRef50_Q1E6D1 Cluster: Predicted protein; n=1; Coccidioides im...    31   6.7  
UniRef50_Q9NS93 Cluster: Transmembrane 7 superfamily member 3 pr...    31   6.7  
UniRef50_Q9KAT5 Cluster: BH2201 protein; n=1; Bacillus haloduran...    30   8.9  

>UniRef50_Q41I43 Cluster: Integral membrane protein TerC; n=1;
           Exiguobacterium sibiricum 255-15|Rep: Integral membrane
           protein TerC - Exiguobacterium sibiricum 255-15
          Length = 301

 Score = 37.5 bits (83), Expect = 0.059
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -1

Query: 252 MSDFIYLFICVNFFKMYTFYIILAVITRRLSAKENGLRRWLEQRLPQXQ 106
           + +F +++     F +YT Y++   I +  S +EN   RWLE+RLP  Q
Sbjct: 122 LENFAWVYYIFGAFLVYTGYMMFKNIGQETSLEENKTIRWLEKRLPITQ 170


>UniRef50_Q4DPA9 Cluster: Chloride channel protein, putative; n=2;
           Trypanosoma|Rep: Chloride channel protein, putative -
           Trypanosoma cruzi
          Length = 1038

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 15/66 (22%)
 Frame = -1

Query: 252 MSDFIYLFI-CVNF---FKMYTFYII-----------LAVITRRLSAKENGLRRWLEQRL 118
           +S+ +  F+ CV+F    +M+ FY I           LA +  RLS+   GLRRWLEQRL
Sbjct: 358 ISEMVQFFVSCVSFEDLVRMHIFYFIPTTLIGLFCGVLASVFVRLSSFALGLRRWLEQRL 417

Query: 117 PQXQLR 100
               +R
Sbjct: 418 ETKAVR 423


>UniRef50_Q4DTU7 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 839

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 174 TRRLSAKENGLRRWLEQRLPQXQLRERSAXRN-ATDEKLKHHRCTMKALKRHK 19
           T RL  +   LR+  E  + + + +E +A R+ A +E  K H+   +A KRH+
Sbjct: 70  TGRLKGEFARLRKLTEGHVTEAEAKEEAAKRHQAEEEATKRHQAEEEATKRHQ 122


>UniRef50_Q1E6D1 Cluster: Predicted protein; n=1; Coccidioides
           immitis|Rep: Predicted protein - Coccidioides immitis
          Length = 173

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = -1

Query: 240 IYLFICVNFFKMYTFYIILAVITRRLSAKENGLRRWLEQRLPQXQLRERS 91
           ++ F C  FFK+YT ++ L  ++ R ++    LR W E    Q + +E+S
Sbjct: 81  LFSFRC--FFKLYTKHVPLPQLSGRTTSLRVNLRDWPEYDARQIEKKEKS 128


>UniRef50_Q9NS93 Cluster: Transmembrane 7 superfamily member 3
           precursor; n=19; Euteleostomi|Rep: Transmembrane 7
           superfamily member 3 precursor - Homo sapiens (Human)
          Length = 570

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 34  CLHCTSVVLQFLISRVTXCTPLPQLXL 114
           C+ C  +VL FLIS VT  TPL  L +
Sbjct: 375 CMLCVGLVLGFLISSVTFFTPLGNLKI 401


>UniRef50_Q9KAT5 Cluster: BH2201 protein; n=1; Bacillus
           halodurans|Rep: BH2201 protein - Bacillus halodurans
          Length = 187

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
 Frame = -1

Query: 222 VNFFKMYTFYIILAVI---TRRLSAKENGLRRWLE 127
           +NF+ M T  +++AV+   T RLS K   +R+WL+
Sbjct: 14  LNFWLMTTSLLLIAVLGFFTARLSRKSRAIRKWLD 48


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,767,388
Number of Sequences: 1657284
Number of extensions: 2704812
Number of successful extensions: 7755
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7753
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)