Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_O05
         (333 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   1.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   2.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   3.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   5.9  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 192 IILAVITRRLSAKENGLRRWLEQRLPQXQLRERSAXRNA 76
           IIL  +  +  AK N   ++++++L     +ER+  +NA
Sbjct: 95  IILGSLKTKEWAKLNNKFQYIDEKLKTRDQKERNLFKNA 133


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 174 TRRLSAKENGLRRWLEQRLPQXQLRE 97
           TR+ S +ENGL R L       QL E
Sbjct: 124 TRKSSQQENGLPRRLRTAYTNTQLLE 149


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 231 FICVNFFKMYTFYIILA 181
           FIC+  F+  TF+II+A
Sbjct: 302 FICLLPFRALTFWIIVA 318


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -1

Query: 252 MSDFIYLFICVNFFKMY 202
           ++ F++L IC ++ K+Y
Sbjct: 13  IAGFLFLLICDSYLKIY 29


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 248 LILFIYLFALISLKC 204
           L LF+Y+F  +S+ C
Sbjct: 133 LQLFLYIFTYLSVTC 147


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -1

Query: 234 LFICVNFFKMYTFYIILAVIT 172
           +F+C    K+Y   ++L ++T
Sbjct: 222 VFMCKKINKLYGHQLLLTILT 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,275
Number of Sequences: 336
Number of extensions: 768
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)