Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_O05
         (333 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075428-1|AAL68244.1|  450|Drosophila melanogaster LD47671p pro...    27   4.4  
AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB...    27   4.4  
AE014134-1099|AAF52388.1|  450|Drosophila melanogaster CG9536-PA...    27   4.4  

>AY075428-1|AAL68244.1|  450|Drosophila melanogaster LD47671p
           protein.
          Length = 450

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -1

Query: 192 IILAVITRRLSAKENGLRRWLEQRLPQXQLRERSAXRNATDEKLKHH 52
           I L  ++ RL A ++     L +  PQ Q  +    ++A  ++ KHH
Sbjct: 296 IALKALSERLKATDSSRHAQLPKSFPQQQQLQHHHHQHAPHQQQKHH 342


>AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB
            protein.
          Length = 2893

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -1

Query: 240  IYLFICVNFFKMYTFYIILAVITRRLSAKENGLRRWLEQRLPQXQLRERSAXRNATD 70
            +Y    + F     F +++A++    S++ N  RR  EQR    +LRE +   N +D
Sbjct: 1143 LYFVALMTFGNYVLFNLLVAILVEGFSSERNE-RREREQRELVKKLREETLAENYSD 1198


>AE014134-1099|AAF52388.1|  450|Drosophila melanogaster CG9536-PA
           protein.
          Length = 450

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -1

Query: 192 IILAVITRRLSAKENGLRRWLEQRLPQXQLRERSAXRNATDEKLKHH 52
           I L  ++ RL A ++     L +  PQ Q  +    ++A  ++ KHH
Sbjct: 296 IALKALSERLKATDSSRHAQLPKSFPQQQQLQHHHHQHAPHQQQKHH 342


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,198,451
Number of Sequences: 53049
Number of extensions: 126159
Number of successful extensions: 600
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)