Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N24
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.88 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   2.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   4.7  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   6.2  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.2  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 105 VKFWLHKICHL 137
           + +WLH+ICH+
Sbjct: 106 IGYWLHQICHI 116


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +2

Query: 710 IQGEAGVVIPDDGYLXKVR 766
           I GE GVV  DDG L  VR
Sbjct: 216 IVGEYGVVSHDDGSLRGVR 234


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
          transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 16 FGRLHTSVVGRSHCNNNAGTIV 81
          FGR + ++   S C NN   ++
Sbjct: 29 FGRTYNNISSISECKNNGECVI 50


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 170 NQIWLPTGKLLXMTNFVQPEFXEILTRXD 84
           N IWL        ++F+ PEF  ++   D
Sbjct: 264 NNIWLHVDAAYAGSSFICPEFRYLMKGID 292


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 215 GVFVWDVEGKKYYDF 259
           GVF+W +E    ++F
Sbjct: 346 GVFIWSIETDDMHEF 360


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 419 DHIQITLSYTFHTCQVDRNKMLLTLVSNYQLVSSKLQLF*GG 294
           D I I +SY +HT    +  +   L  N   V S +Q +  G
Sbjct: 195 DFINI-MSYDYHTADQPQTGLNAPLYGNSMSVDSSVQSWLSG 235


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 362 YSDQLGKYEKYMTELFGYDRLLPMNTGV 445
           YS +L    KY+ ++ GY   L M T +
Sbjct: 98  YSRKLSGIFKYIDQMAGYTGFLAMLTSM 125


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 362 YSDQLGKYEKYMTELFGYDRLLPMNTGV 445
           YS +L    KY+ ++ GY   L M T +
Sbjct: 54  YSRKLSGIFKYIDQMAGYTGFLAMLTSM 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,850
Number of Sequences: 336
Number of extensions: 4028
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)