Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_N24
(766 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 238 7e-64
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 119 4e-28
SPAC27F1.05c |||aminotransferase class-III, unknown specificty|S... 65 1e-11
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 57 3e-09
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 54 3e-08
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 38 0.002
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 27 2.2
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 26 5.1
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 5.1
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 26 6.8
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 25 9.0
SPCC1919.09 |tif6||translation initiation factor eIF6|Schizosacc... 25 9.0
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 238 bits (582), Expect = 7e-64
Identities = 115/224 (51%), Positives = 149/224 (66%), Gaps = 10/224 (4%)
Frame = +2
Query: 113 LAAQNLSSXAIFQLXAKSGCSNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGH 292
L S+ I L + NY PLPV + +G VWD EG++Y DFLSAYSAVNQGH
Sbjct: 6 LLHNTFSTEQIEVLENEYAAHNYHPLPVCFSKAKGAKVWDPEGREYLDFLSAYSAVNQGH 65
Query: 293 CHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKI 472
CHP+IIEAL +QA +TL SRAFY+D+ G + KY+TE FGY+ ++PMNTG E E+ACK+
Sbjct: 66 CHPKIIEALVEQAQRVTLSSRAFYNDKFGPFAKYITEYFGYEMVIPMNTGAEAVETACKL 125
Query: 473 ARKWGYEVKKIPEGQAKIIFAEGNFWGRTLSAVSSSSDPTCYQGFGPYMPGF-------- 628
AR WGY+ KKIP +A I+ NF GRT+ +S S+DP +GPY+P
Sbjct: 126 ARLWGYKAKKIPTDEAIILSCVDNFHGRTMGIISMSTDPDARDNYGPYLPNVGPKISGAD 185
Query: 629 NLIPYNDIPALEKALQ--DPTVAAYMVEPIQGEAGVVIPDDGYL 754
++ YN+I L+ L P VAA++VEPIQGEAGV++PDDGYL
Sbjct: 186 RVLRYNNIEDLKYYLDTFGPKVAAFLVEPIQGEAGVMVPDDGYL 229
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 119 bits (287), Expect = 4e-28
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Frame = +2
Query: 173 SNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVS 352
S YA PV +GEG +++D EG+KY DF S + + GH HP + Q L S
Sbjct: 49 SVYARYPVVAAKGEGSYLFDKEGRKYIDFTSGVAVTSLGHAHPEVARLAADQCSKLVHSS 108
Query: 353 RAFYSDQLGKYEKYMTE-------LFGYDRLLPMNTGVEGGESACKIARKWGYEVKKIPE 511
FY++ + + + G ++ N G E E+A K ARK +E K E
Sbjct: 109 NLFYNEPAIELSNVINNSLAKNSGIAGPTKIFFANCGTEANETALKFARKAAFE--KYGE 166
Query: 512 GQAKIIFAEGNFWGRTLSAVSSSSDPTCYQGFGPYMPGFNLIPYNDIPALEKALQDPTVA 691
G+++I++ +F GR+L ++S +++P +GF P +P YND ++E+ + D T A
Sbjct: 167 GKSQIVYFNNSFHGRSLGSLSITANPKYKRGFQPLLPDVVQAVYNDPASIEQFVNDKT-A 225
Query: 692 AYMVEPIQGEAGVVIPDDGYLXKVR 766
A +VEP+QGE G+ +L +R
Sbjct: 226 AVIVEPVQGEGGICPAKPEFLIALR 250
>SPAC27F1.05c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 1|||Manual
Length = 484
Score = 64.9 bits (151), Expect = 1e-11
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 1/180 (0%)
Frame = +2
Query: 230 DVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQAD-NLTLVSRAFYSDQLGKYEKYMTEL 406
D +G ++ D + V G+ + + + L+K D L ++ Y + + + M L
Sbjct: 85 DEKGTEHLDLIGGVGVVTVGNNNQYVWDCLQKCFDAKLYMMGAISYRNLAAAFGRNMALL 144
Query: 407 FGYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEGNFWGRTLSAVSSSSD 586
+L T G E+ + + + P + K + +F G+T AV
Sbjct: 145 SPGQKLTRTWTATGGAEANEGVIKLIRLATRYKPN-KKKFLSTLNSFHGKTTGAVFLGGK 203
Query: 587 PTCYQGFGPYMPGFNLIPYNDIPALEKALQDPTVAAYMVEPIQGEAGVVIPDDGYLXKVR 766
+ P + +PY D AL+ AL +++VEPIQGE GV++P GYL K R
Sbjct: 204 EKWQKYQSPAPFDVDYVPYGDAEALQVALSSGMYRSFIVEPIQGEGGVIVPPPGYLAKAR 263
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 56.8 bits (131), Expect = 3e-09
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 4/199 (2%)
Frame = +2
Query: 182 APLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAF 361
AP P+ + G G + DV+G +Y DFL+ +A GH +P I +AL + D + +
Sbjct: 49 APFPIFIEAGYGSKLRDVDGHEYTDFLNELTAGIYGHSNPVIKKALMQGFDEIGISLGGT 108
Query: 362 YSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEG 541
+ +L E + +++ N+G E +A ARK+ G+ +I G
Sbjct: 109 TTCELNYAEALKSRFLSIEKIRFCNSGTEANITAIIAARKF--------TGKRAVIAMHG 160
Query: 542 NFWGRTLSAVSSSSDPTCYQGFGPY---MPGFNLIPYNDIPALEKAL-QDPTVAAYMVEP 709
+ G LS G PY F L YN+ ++ + +AA +VE
Sbjct: 161 GYHGGPLSFA---------HGISPYNMDSQDFILCEYNNSTQFKELVNSSQDIAAVIVEA 211
Query: 710 IQGEAGVVIPDDGYLXKVR 766
+QG G + D ++ ++
Sbjct: 212 MQGAGGAIPADKEFMQTIQ 230
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 53.6 bits (123), Expect = 3e-08
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +2
Query: 191 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSD 370
P + R +G V+D + DF S + GH HP I ++K L + F S
Sbjct: 33 PKIIVRAKGCCVYDEQDNAILDFTSGQMSAILGHSHPDITACIEKNLPKLVHLFSGFLSP 92
Query: 371 QLGKYEKYMTELF--GYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEGN 544
+ + +++L G D+ L ++TG E E+A ++A+ + + + + A +
Sbjct: 93 PVVQLATELSDLLPDGLDKTLFLSTGGEANEAALRMAKVYTNKYECV---------AFSS 143
Query: 545 FWGRTLSAVSSSSDPTCYQGFGPYMPGFNLIP 640
W +S + +G+GP +PG IP
Sbjct: 144 SWHGVTGGAASLTFAAARRGYGPALPGSYTIP 175
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 37.9 bits (84), Expect = 0.002
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Frame = +2
Query: 191 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLV-SRAFYS 367
P + R EGV+++ +G + D + GH + +I+A+ KQ++ + + S F +
Sbjct: 28 PPTVVRAEGVYLYLEDGTRIMDATGGAAVACLGHGNKEVIDAMHKQSEKVCYIHSMGFSN 87
Query: 368 DQLGKYEKYMTELFG--YDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEG 541
+ K + + R N+G E E+ K+ ++ V + + + II +
Sbjct: 88 EPADKLANLLVSEHPDVFARAYFANSGSEAVETCLKLILQYWQLVGE--KQRCHIIARKQ 145
Query: 542 NFWGRTLSAVS 574
+ G TL A+S
Sbjct: 146 GYHGNTLFALS 156
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 236 EGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSR 355
E Y + + AY +VN G I+E LK++ L +V+R
Sbjct: 1180 EPSTYENMVRAYLSVNDGRKAMEIVEQLKRKRYPLPVVNR 1219
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 26.2 bits (55), Expect = 5.1
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +2
Query: 245 KYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRL 424
++ D L Y N HP IEAL+K + Y + K +KY+T L GY L
Sbjct: 111 RFKDHLPFYE--NYIRNHPLAIEALQKSTAPRQTGLKLNY---VSKLDKYVTPLDGYSHL 165
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -2
Query: 495 TSYPHLRAILHALSPPSTPVFIGSRRSYPNN 403
T+ P+L ++H+ S ++PVFI + RS +N
Sbjct: 7 TNTPNLPNLIHSESITNSPVFIPNLRSKSDN 37
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 278 LRSMRLKNHNTFFLRHPTRTLLHL 207
L+ + + N+ FFL H TR L++L
Sbjct: 504 LKELNIANNKLFFLPHSTRYLVNL 527
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/38 (23%), Positives = 16/38 (42%)
Frame = +3
Query: 30 HLCCXPVTLQQQRRHNRPVPSRQNFVKFWLHKICHLKQ 143
H C P + HN + + +FWLH + + +
Sbjct: 808 HCCYEPSFISGLGMHNSSILQKSIVERFWLHGVSQISK 845
>SPCC1919.09 |tif6||translation initiation factor
eIF6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 31 TSVVGRSHCNNNAGTIVPS 87
T ++GR C N G +VPS
Sbjct: 56 TRIIGRLTCGNRKGLLVPS 74
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,159,333
Number of Sequences: 5004
Number of extensions: 67343
Number of successful extensions: 207
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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