Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_N24
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 241 6e-64
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 98 8e-21
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 92 4e-19
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 54 1e-07
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 54 1e-07
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 50 2e-06
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 48 6e-06
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 48 6e-06
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 46 3e-05
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 34 0.14
10_04_0016 + 7601796-7601999,7602495-7602543,7603140-7603165,760... 30 1.8
09_02_0548 - 10467342-10468810,10470309-10471632 29 3.1
01_06_1531 + 38024757-38024790,38025592-38025803,38026111-380262... 29 3.1
02_02_0348 - 9233032-9233154,9233233-9233311,9233387-9233511,923... 29 4.1
09_02_0253 - 6319198-6319240,6319364-6319552,6319650-6319995,632... 29 5.4
06_01_0522 + 3787054-3788004,3788094-3788422,3788640-3788796 28 7.1
01_01_0417 - 3135502-3135672,3135759-3135947,3136037-3136154,313... 28 9.4
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 241 bits (589), Expect = 6e-64
Identities = 111/219 (50%), Positives = 147/219 (67%), Gaps = 2/219 (0%)
Frame = +2
Query: 116 AAQNLSSXAIFQLXAKSGCSNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHC 295
A L+S + ++ + NY P+PV +GEG + D EG KY DFLSAYSAVNQGHC
Sbjct: 33 AGAALTSEELMRMERERSAHNYHPIPVVFSKGEGSHILDPEGNKYIDFLSAYSAVNQGHC 92
Query: 296 HPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIA 475
HP+++ ALK+QA+ LTL SRAFY+D+ + +Y+T +FGY+ +LPMNTG EG E+A K+
Sbjct: 93 HPKVLRALKEQAERLTLSSRAFYNDKFPIFAEYLTSMFGYEMMLPMNTGAEGVETAIKLV 152
Query: 476 RKWGYEVKKIPEGQAKIIFAEGNFWGRTLSAVSSSSDPTCYQGFGPYMPGFNLIPYNDIP 655
RKWGYE KKIP+ +A I+ G F GRTL +S S D +GFGP +PG + + D
Sbjct: 153 RKWGYEKKKIPKNEALIVSCCGCFHGRTLGVISMSCDNDATRGFGPLVPGHLKVDFGDTD 212
Query: 656 ALEKALQD--PTVAAYMVEPIQGEAGVVIPDDGYLXKVR 766
LEK +D + ++ EPIQGEAGV+IP DGYL VR
Sbjct: 213 GLEKIFKDHGERICGFLFEPIQGEAGVIIPPDGYLKAVR 251
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 97.9 bits (233), Expect = 8e-21
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Frame = +2
Query: 131 SSXAIFQLXAKSGCSNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRII 310
+S A+ + A+ Y V L G G ++D +G++Y D + + GH P +
Sbjct: 62 ASRAVVEDEARYIVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWV 121
Query: 311 EALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARKWGY 490
A+ QA L S Y+ K + E DR+ NTG E E+A K ARK+
Sbjct: 122 AAVSAQAATLVHASNVQYTVPQVALAKRLVEASFADRVFFANTGTEANEAAIKFARKFQR 181
Query: 491 EVKKIPEGQAKIIFAEGN--FWGRTLSAVSSSSDPTCYQGFGPYMPGFNLIPYNDIPALE 664
+ P+G A F F GRT+ +++ +S + F P MPG Y ++ +
Sbjct: 182 VAR--PDGDAPTEFMSFTNCFHGRTMGSLALTSKVQYREPFAPVMPGATFAEYGNLEEAK 239
Query: 665 KALQDPTVAAYMVEPIQGEAGV 730
K +Q +AA VEP+QGE G+
Sbjct: 240 KVIQSGKIAAVFVEPVQGEGGI 261
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 92.3 bits (219), Expect = 4e-19
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Frame = +2
Query: 131 SSXAIFQLXAKSGCSNYAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRII 310
+S A+ + A+ Y V L G G ++D +G++Y D + + GH P +
Sbjct: 66 ASRAVVEDEARYIVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWV 125
Query: 311 EALKKQADNLTLVSRAFYSDQLGKYEKY-------MTELFGYDRLLPMNTGVEGGESACK 469
A+ QA L S Y+ E+ + E DR+ NTG E E+A K
Sbjct: 126 AAVSAQAATLVHASNVQYTVPQASLERVTPTAHHRLVEASFADRVFFANTGTEANEAAIK 185
Query: 470 IARKWGYEVKKIPEGQAKIIFAEGN--FWGRTLSAVSSSSDPTCYQGFGPYMPGFNLIPY 643
ARK Y+ P+G A F F GRT+ +++ +S + F P MPG Y
Sbjct: 186 FARK--YQRVARPDGDAPTEFMSFTNCFHGRTMGSLALTSKVQYREPFAPVMPGATFAEY 243
Query: 644 NDIPALEKALQDPTVAAYMVEPIQGEAGV 730
++ +K +Q +AA VEP+QGE G+
Sbjct: 244 GNLEEAKKVIQSGKIAAVFVEPMQGEGGI 272
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 54.0 bits (124), Expect = 1e-07
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 10/202 (4%)
Frame = +2
Query: 191 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSD 370
P+ +G +WDV+G +Y D++ ++ GH + AL + T +
Sbjct: 86 PIVFDSVKGSRMWDVDGNEYIDYVGSWGPAIIGHADDTVNAALIETLKKGTSFGAPCVLE 145
Query: 371 QLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEGNFW 550
+ E ++ + + + +N+G E A ++ R + G+ KI+ EG +
Sbjct: 146 NV-LAEMVISAVPSIEMVRFVNSGTEACMGALRLVRAF--------TGREKILKFEGCYH 196
Query: 551 GRTLSAVSSSSDPTCYQGFGPYMPGFN--------LIPYNDIPALEKALQD--PTVAAYM 700
G S + + G P PG PYND+ A++K ++ +AA
Sbjct: 197 GHADSFLVKAGSGVATLGL-PDSPGVPKGATSETLTAPYNDVEAVKKLFEENKGQIAAVF 255
Query: 701 VEPIQGEAGVVIPDDGYLXKVR 766
+EP+ G AG + P G+L +R
Sbjct: 256 LEPVVGNAGFIPPQPGFLNALR 277
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 54.0 bits (124), Expect = 1e-07
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Frame = +2
Query: 191 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSD 370
P+ + R EG +V+D+ GKKY D L+ + G PR+I+A Q + L +F++
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKLPFY-HSFWNR 180
Query: 371 QLGKYEKYMTELFG------YDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIF 532
E+ ++ N+G E +S K+ W Y + K I
Sbjct: 181 TTKPSLDLANEILSMFTAREMGKIFFTNSGSEANDSQVKLV--WYYNNALGRPNKKKFIA 238
Query: 533 AEGNFWGRTLSAVSSSSDPTCYQGFG-----------PYMPGFNLIPYND-------IPA 658
++ G TL + S S P +Q F P+ F+L +
Sbjct: 239 RSKSYHGSTLVSASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPDETEEEFATRLATN 298
Query: 659 LEKAL--QDP-TVAAYMVEPIQGEAGVVIPDDGYLXKVR 766
LE + + P T+AA++ EP+ G GV+ P Y K++
Sbjct: 299 LENLILKEGPETIAAFIAEPVMGAGGVIPPPKTYFEKIQ 337
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 50.0 bits (114), Expect = 2e-06
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Frame = +2
Query: 191 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFY-- 364
P+ + R EG +V+D++GKKY D L+ G PR+++A +Q L +F+
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKLPFY-HSFWNR 569
Query: 365 ----SDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIF 532
S L K M ++ N+G E +S K+ W Y + K I
Sbjct: 570 TTKPSLDLAKELLSMFTAREMGKVFFTNSGSEANDSQVKLV--WYYNNALGRPDKKKFIA 627
Query: 533 AEGNFWGRTLSAVSSSSDPTCYQGF 607
++ G TL + S S P +Q F
Sbjct: 628 RSKSYHGSTLISASLSGLPALHQKF 652
Score = 36.7 bits (81), Expect = 0.020
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 16/218 (7%)
Frame = +2
Query: 161 KSGCSNYAPLPVALCR-GEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADN 337
+ G A P +C G +V+D +G KY D L+ G PR+++A Q +
Sbjct: 38 RGGGGGAAISPSTVCHITGGSYVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNK 97
Query: 338 LTLVSRAFYS---DQLGKYEKYMTELFGYD--RLLPMNTGVEGGESACKIARKWGYEVKK 502
L + S L E+ ++ + ++ N+G E +S K+ W Y
Sbjct: 98 LPFYHSFWNSTAKPPLDLAEELISMFTAKEMGKVFFTNSGSEANDSQVKLV--WYYNNAL 155
Query: 503 IPEGQAKIIFAEGNFWGRTL-----SAVSSSSDPTCYQGFGPYMPG-----FNLIPYNDI 652
+ KII L + +D Y FG +PG F +++
Sbjct: 156 GRPNKKKIIAQSQALPAMHLKFDLPAPFVLHTDCPHYWRFG--LPGEAEEEFATRLADNL 213
Query: 653 PALEKALQDPTVAAYMVEPIQGEAGVVIPDDGYLXKVR 766
L TVAA++ EP+ G GV+ P Y K++
Sbjct: 214 ENLILKEGPETVAAFIAEPVIGAGGVIPPPKTYFEKIQ 251
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 686 VAAYMVEPIQGEAGVVIPDDGYLXKVR 766
+AA++ EP+ G GV+ P Y KV+
Sbjct: 716 IAAFIAEPVMGAGGVIPPPKTYFEKVQ 742
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 48.4 bits (110), Expect = 6e-06
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 12/200 (6%)
Frame = +2
Query: 191 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSD 370
P+ + G+ +++D G++Y D + + V GHCHP ++ A+ QA L + + +
Sbjct: 64 PLNIVEGKMQYLFDERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRLQHSTVLYLNH 123
Query: 371 QLGKYEKYMTELFGYDRLLPM--NTGVEGGESACKIARKWG-----YEVKKIPEGQAKII 529
+ + + + D + N+G E E A +AR + ++ G A
Sbjct: 124 AIADFAEALASKMPGDLKVVFFTNSGTEANELAIMMARLYTGSHDIISLRNSYHGNAAGT 183
Query: 530 F---AEGNF-WGRTLSAVSSSSDPTCYQG-FGPYMPGFNLIPYNDIPALEKALQDPTVAA 694
A+ N+ + S V + +P Y+G FG + D+ + + VA
Sbjct: 184 MGATAQKNWKFSVVQSGVHHAVNPDPYRGAFGSDAEKY----ARDVQEIIEFGTTGQVAG 239
Query: 695 YMVEPIQGEAGVVIPDDGYL 754
++ E IQG G+V GYL
Sbjct: 240 FISEAIQGVGGIVELSPGYL 259
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Frame = +2
Query: 179 YAPLPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRA 358
Y P+ + G+ +++D GK+Y D V+ GHCHP I+ A+ +Q L +
Sbjct: 84 YYQKPLNIVEGKMQYLYDENGKRYLDCFGGIVTVSCGHCHPDIVNAVVEQTKLLQHTTTI 143
Query: 359 FYSDQLGKY-EKYMTELFGYDRLLP-MNTGVEGGESACKIARKWGYEVKKI 505
+ + + ++ E +++ G +++ +N+G E E A +AR + + I
Sbjct: 144 YLNQPIVEFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLYSGNLNMI 194
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 46.4 bits (105), Expect = 3e-05
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 9/190 (4%)
Frame = +2
Query: 221 FVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMT 400
+++D +G++Y D + V GHCHP ++EA+ QA + + + + + + + +
Sbjct: 99 YLFDEDGRRYLDAFGGIATVCCGHCHPDVVEAMVNQAKRIQHSTVLYLNHAIADFAEALA 158
Query: 401 ELFGYDRLLPM--NTGVEGGESACKIARKWG--YEVKKIPEG----QAKIIFAEGNFWGR 556
D + N+G E E A IAR + +++ + G A + A +
Sbjct: 159 AKMPGDLKVVFFTNSGTEANELALMIARLYTGCHDIISLRNGYHGNAAGTMGATAQCNWK 218
Query: 557 TLSAVSSSSDPTCYQG-FGPYMPGFNLIPYNDIPALEKALQDPTVAAYMVEPIQGEAGVV 733
+ V + +P Y+G FG + D+ + V ++ E IQG G+V
Sbjct: 219 FNTGVHHALNPDPYRGAFGSDGEKY----ARDVQEIIDFGTTGRVGGFISEAIQGVGGIV 274
Query: 734 IPDDGYLXKV 763
GYL V
Sbjct: 275 ELAPGYLPAV 284
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 33.9 bits (74), Expect = 0.14
Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 9/181 (4%)
Frame = +2
Query: 251 YDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRLLP 430
++F YS G PR+++A +Q + L +F++ EL
Sbjct: 11 WEFEFDYSTRYVGGSEPRLVKAATEQLNKLPFY-HSFWNHTTRPSLDLAKELISMFTARE 69
Query: 431 M------NTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEGNFWGRTLSAVSSSSDPT 592
M N+G E +S KI W Y + II ++ G T + S S
Sbjct: 70 MGKVFFTNSGSEANDSQVKIV--WYYNNALGRPKKKNIISRTQSYHGTTFISASLSGILI 127
Query: 593 CYQGFGPYMPGFNLIPYNDIPALEKALQD---PTVAAYMVEPIQGEAGVVIPDDGYLXKV 763
C + A + D +AA++ EP+ G GV++P Y K+
Sbjct: 128 CQDVLFCTQTALTTGASISLSAFFDEINDFCGRQIAAFIAEPVIGAGGVILPPKTYFEKI 187
Query: 764 R 766
+
Sbjct: 188 Q 188
>10_04_0016 +
7601796-7601999,7602495-7602543,7603140-7603165,
7603334-7603339,7603496-7603570,7603880-7603933
Length = 137
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 686 VAAYMVEPIQGEAGVVIPDDGYLXKV 763
+AA++ EP+ G GV+ P Y KV
Sbjct: 96 IAAFIAEPVMGAGGVIAPPKTYFEKV 121
>09_02_0548 - 10467342-10468810,10470309-10471632
Length = 930
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -1
Query: 508 RYLLDFVPPFTCYLACTFTS 449
RYLL+++ P + LACTFTS
Sbjct: 700 RYLLNYILPLSETLACTFTS 719
>01_06_1531 +
38024757-38024790,38025592-38025803,38026111-38026248,
38026405-38026449,38026499-38026591,38028072-38028815
Length = 421
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Frame = +2
Query: 374 LGKYEKYMTELFGYDRLLPMNTGVE-----GGESACKIARKWG-YEVKKIPEGQAKIIFA 535
+G ++ +TE Y+ L+ V+ E++C + YE ++I + ++
Sbjct: 11 IGNLDEKVTERILYEILIQPGRVVDLCIPRDKETSCPKGYAFAEYETEEIAQYAVQLFSG 70
Query: 536 EGNFWGRTLSAVSSSSDPTCYQGFGPYMPGFNLIP 640
+G+TL S D G P MP N +P
Sbjct: 71 LVRLYGKTLKFAISGQDKPSSNGNNPVMPKLNPVP 105
>02_02_0348 -
9233032-9233154,9233233-9233311,9233387-9233511,
9233597-9233734,9233802-9233993,9235269-9237209
Length = 865
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 751 IAVVRYYDACLSLNRFNHVSRDCRILESF-L*SGDVIVGNKIEAR 620
+ +V YY+ CLS R+ DC+ +S S D + K AR
Sbjct: 414 VLLVEYYEHCLSRMRYREADLDCKASQSIPFTSNDASLTEKDAAR 458
>09_02_0253 -
6319198-6319240,6319364-6319552,6319650-6319995,
6320811-6320893,6320977-6321074,6321384-6321461,
6321891-6322000,6322083-6322180,6323199-6323296,
6323403-6323463,6323688-6323831,6324103-6324206,
6324634-6324787,6324860-6324879,6324967-6325029,
6326521-6326632,6326711-6326796,6326872-6326899,
6327242-6327293,6329034-6329250
Length = 727
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 120 HKICHLKQFSSWXPNLVVAIT 182
H CHL+QFS + PN +T
Sbjct: 568 HLFCHLRQFSPFLPNFASGLT 588
>06_01_0522 + 3787054-3788004,3788094-3788422,3788640-3788796
Length = 478
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2
Query: 549 QKFPSAKIILAWPSGIF-LTSYPHLRAILHALSPPSTPVFIGSRRSY 412
+K + K++LA S + LT+Y + A + ++PP P + S R+Y
Sbjct: 137 EKDMATKLLLARGSSLIDLTTYNSIAAAKNIIAPPPPPRTLKSERAY 183
>01_01_0417 -
3135502-3135672,3135759-3135947,3136037-3136154,
3136398-3137048,3137146-3137309,3138598-3139098
Length = 597
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 531 LRKETSGGELYRRFHHHQTQPAIRASDRTCRASILFPTMTSPL*RKLSKIRQSRLTWLN 707
L+K T+ E YRR + +P + R ++LF + L + I ++ +W N
Sbjct: 370 LKKNTAAYENYRRIYVPPGEPPLSEPGEPLRVNVLFQHIQKMLSANSAVIAETGDSWFN 428
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,279,702
Number of Sequences: 37544
Number of extensions: 467488
Number of successful extensions: 1299
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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