Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N24
         (766 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.77 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.77 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   1.0  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    23   4.1  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   9.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   9.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.5  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +3

Query: 45  PVTLQQQRRHNRPVPSRQ 98
           P+++  + RH+RPVP+++
Sbjct: 389 PISVANELRHSRPVPAKK 406


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +3

Query: 45  PVTLQQQRRHNRPVPSRQ 98
           P+++  + RH+RPVP+++
Sbjct: 389 PISVANELRHSRPVPAKK 406


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 305 IIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRLL 427
           +I  L K+A  +  V+   + DQ+G +       +GYDR+L
Sbjct: 46  LIPRLAKKAIQVLGVTEKEFFDQMGVHFVGFVGQYGYDRVL 86


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 560 LSAVSSSSDPTCYQGFGPYM 619
           L+ VSS      + GFGPY+
Sbjct: 14  LATVSSQDYSQLFAGFGPYI 33


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 227 WDVEGKKYYDFLSAYSAVN 283
           WD +G  Y++ LS    +N
Sbjct: 72  WDYKGIVYFELLSPNRTIN 90


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 573 HHHQTQPAIRAS 608
           HHHQ Q A+ A+
Sbjct: 99  HHHQQQQAVAAA 110


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 570 FHHHQTQPAIRASDR 614
           FHH  T P +RAS R
Sbjct: 538 FHHRDT-PVVRASGR 551


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 570 FHHHQTQPAIRASDR 614
           FHH  T P +RAS R
Sbjct: 628 FHHRDT-PVVRASGR 641


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,030
Number of Sequences: 438
Number of extensions: 4707
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)