Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N23
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.3  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 320 VYCTLR*GFVFLYYLSSVSAVHRVQQRNCSRQTFSSIHI 204
           V+C  R      YY  SV+ +HR   +N    +F  IH+
Sbjct: 112 VFCRDRVNPYLFYYAFSVALLHRPDTQNLDLPSF--IHV 148


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 236 NYVVEHGELPKLKIDSKEKQNL 301
           NY+  H  +P +K   K K+NL
Sbjct: 270 NYISRHSPIPFIKKLGKIKENL 291


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 236 NYVVEHGELPKLKIDSKEKQNL 301
           NY+  H  +P +K   K K+NL
Sbjct: 270 NYISRHSPIPFIKKLGKIKENL 291


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 236 NYVVEHGELPKLKIDSKEKQNL 301
           NY+  H  +P +K   K K+NL
Sbjct: 270 NYISRHSPIPFIKKLGKIKENL 291


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 236 NYVVEHGELPKLKIDSKEKQNL 301
           NY+  H  +P +K   K K+NL
Sbjct: 270 NYISRHSPIPFIKKLGKIKENL 291


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -1

Query: 625 AAYVTKFTWIIESLYNLSTTMFN*TKYVIHLFVCFI 518
           A Y+    W   +LY+L   +F   K V     C+I
Sbjct: 139 ARYLILAAWFFSALYSLPILIFYEEKIVKGKLQCWI 174


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 572 TEVIETFYDPSKFGNIGRYI 631
           +E++ET YDP +   +  Y+
Sbjct: 162 SEIVETVYDPREDDRVVCYV 181


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 482 LTKDQAFKRYHHNKTNKE 535
           +TKD+ F+ + HN   +E
Sbjct: 121 VTKDEPFRPHPHNLVGRE 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,847
Number of Sequences: 336
Number of extensions: 4055
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)