Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_N23
(778 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 87 3e-18
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 54 2e-08
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 51 2e-07
SPBC216.04c |||methionine sulfoxide |Schizosaccharomyces pombe|c... 32 0.11
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 29 0.74
SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr 1||... 28 1.3
SPCC1739.05 |set5||histone lysine methyltransferase Set5 |Schizo... 28 1.3
SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr 1... 26 5.2
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 26 6.9
SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||... 26 6.9
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 9.2
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 87.0 bits (206), Expect = 3e-18
Identities = 66/201 (32%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Frame = +2
Query: 164 ESYCSCXNV--CSY---PKCECLKRSGGNNYVVEHGELPKLKIDSKEKQNLILECNKQCT 328
+S C+C ++ C +CECL + + +++ D+ +I ECN C+
Sbjct: 257 QSGCNCSSLGGCDLNNPSRCECLDDLDEPTHFAYDAQ-GRVRADTGA---VIYECNSFCS 312
Query: 329 CSYQCGNRLVQLGPLKGLMIKKCDIVQKGFGLFTNVFVRNGSFICEYIGELLTKDQAFKR 508
CS +C NR+VQ G L I K +KG+G+ + F G+FI Y+GE++T +A KR
Sbjct: 313 CSMECPNRVVQRGRTLPLEIFKTK--EKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKR 370
Query: 509 YHHNKTNKEMNYIFCLIEHCGTEVIETFYDPSKFGNIGRYINHSCEPNSQIL-PVRYD-- 679
N + + Y+F L + E D +G++ R+ NHSC PN I VR
Sbjct: 371 -DKNYDDDGITYLFDL--DMFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGF 427
Query: 680 MPIPKLAIFACEDIKPGSEIT 742
I LA FA +DI+P E+T
Sbjct: 428 RTIYDLAFFAIKDIQPLEELT 448
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 54.0 bits (124), Expect = 2e-08
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Frame = +2
Query: 305 LEC-NKQCTCSYQCGNRLVQLGPLKGLMIKKCDIVQKGFGLFTNVFVRNGSFICEYIGEL 481
+EC ++ C C N+ Q + + + +KGFGL + + +F+ EYIGE+
Sbjct: 156 IECTDEDNVCGPSCQNQRFQRHEFAKVDVFLTE--KKGFGLRADANLPKDTFVYEYIGEV 213
Query: 482 LTKDQAFKRYHHNKTNKEMNYIFCLIEHCGTEVIETFYDPSKFGNIGRYINHSCEPNSQI 661
+ + + KR + ++ F +++ + D +K G++ R+ NHSC PN +
Sbjct: 214 IPEQKFRKRMRQYDSEGIKHFYFMMLQK------GEYIDATKRGSLARFCNHSCRPNCYV 267
Query: 662 LPVRYDMPIPKLAIFACEDIKPGSEIT 742
+ ++ IF DI G E+T
Sbjct: 268 DKWMVGDKL-RMGIFCKRDIIRGEELT 293
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 51.2 bits (117), Expect = 2e-07
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +2
Query: 419 GLFTNVFVRNGSFICEYIGELLTKDQAFKRY-HHNKTNKEMNYIFCLIEHCGTEVIETFY 595
GLF + + EYIGE++ + A R ++ + +Y+F + E +
Sbjct: 794 GLFAMENIDKNDMVIEYIGEIIRQRVADNREKNYVREGIGDSYLFRIDE-------DVIV 846
Query: 596 DPSKFGNIGRYINHSCEPNSQILPVRYDMPIPKLAIFACEDIKPGSEIT 742
D +K GNI R+INHSC PN +R + K+ I+A DI G E+T
Sbjct: 847 DATKKGNIARFINHSCAPNCIARIIRVEGK-RKIVIYADRDIMHGEELT 894
>SPBC216.04c |||methionine sulfoxide |Schizosaccharomyces pombe|chr
2|||Manual
Length = 138
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 359 QLGPLKGLMIKKCDIVQKGFGLFTNVFVRNGSFICEYIGELLTK 490
+LGP K ++++ G G FT+ F + G F+C ELL K
Sbjct: 15 ELGPEKYRIMRQKGTEHPGAGRFTHQFPKQGVFVCAACKELLYK 58
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 29.1 bits (62), Expect = 0.74
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 623 RYINHSCEPNSQILPVRYDMPIPKLAIFACEDIKPGSEIT 742
R++NH C N R++ ++ + DIKPG EIT
Sbjct: 183 RFVNHDCNANC-----RFNTSGKRIWLRCVRDIKPGEEIT 217
>SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 155 SQLESYCSCXNVCSYPKCECLKRSGGNNYVVEHGELPKLKIDSKEKQNLILECN 316
S L + +C N C +P CL + +HG +P + + L+L N
Sbjct: 86 SGLTASVACCNCCRHPSEACLYILNKRKVMSQHGLVPPAMLVGNGIEKLLLHSN 139
>SPCC1739.05 |set5||histone lysine methyltransferase Set5
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 319
Score = 28.3 bits (60), Expect = 1.3
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 13/139 (9%)
Frame = +2
Query: 362 LGPLKGLMIKKCDIVQKGFGLFTNVFVRNGSFICEYIGELLTKDQA--FKRYHHNKTNKE 535
+ P + + K I KG G+ V + G+ I + TK A + KT +E
Sbjct: 1 MNPYETEIYKVVPIPNKGMGMIAKVKIPVGTRIFAETPLIRTKSDAKEIEEALSTKTKEE 60
Query: 536 MNYIFCLIE-HCGT--EVIETFY------DPSKFGN--IGRYINHSCEPNSQILPVRYDM 682
L H T + FY D +K G +G +NH C PN + ++
Sbjct: 61 QEAFHRLFNAHPDTMGPFLGPFYSNALTIDETKGGMFLLGSRMNHDCSPN---VKHTWNP 117
Query: 683 PIPKLAIFACEDIKPGSEI 739
+ ++ + A DI+ G EI
Sbjct: 118 RLDQVTVHAVRDIEAGEEI 136
>SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 221
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 274 LQFRQFTVFNNVIVPARPFQAFTFRI 197
+QFR F +NVI PF A R+
Sbjct: 105 IQFRWFVALSNVIQTENPFIAIVLRV 130
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 25.8 bits (54), Expect = 6.9
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 629 INHSCEPNSQIL 664
+NHSC+PN QI+
Sbjct: 192 LNHSCDPNCQII 203
>SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 489 LVSNSPIYSQINDPLRTKTLVNKPNPF 409
L SNS S ++DPL +KTL + NPF
Sbjct: 5 LFSNSETCS-LSDPLTSKTLSSIENPF 30
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 251 HGELPKLKIDSKEKQNLILECNKQCTCS 334
H EL L++DS + + NK+ CS
Sbjct: 1077 HSELEALRLDSSRNEQSLFMPNKRLDCS 1104
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,940,760
Number of Sequences: 5004
Number of extensions: 59898
Number of successful extensions: 163
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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