Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_N22
(673 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 230 1e-61
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 230 1e-61
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 157 2e-39
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 90 2e-19
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 77 2e-15
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 76 4e-15
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 74 2e-14
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 41 1e-04
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 34 0.021
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 34 0.021
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 34 0.021
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 30 0.35
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 28 1.1
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 28 1.1
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 1.4
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.4
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 27 2.5
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 26 5.7
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 26 5.7
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.5
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 25 7.5
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 7.5
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 9.9
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 25 9.9
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 25 9.9
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 25 9.9
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 230 bits (563), Expect = 1e-61
Identities = 120/211 (56%), Positives = 149/211 (70%), Gaps = 1/211 (0%)
Frame = +1
Query: 43 MVNFTVXEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 222
MV FT E+R +M K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60
Query: 223 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEV 399
DEQ+R +TIKSTAIS+F E+ + D+ D +E ++ FL+NLIDSPGHVDFSSEV
Sbjct: 61 ADEQERGVTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEV 115
Query: 400 TAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXY 579
TAALRVTDGAL QTETVLRQA+ ERI+P++ +NK+DR Y
Sbjct: 116 TAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELY 175
Query: 580 QTFQRIVXNVNVIIATYNDDGGPMGEVRVXP 672
Q F R+V +VNV+I+TY D +G+ +V P
Sbjct: 176 QNFARVVESVNVVISTYYDK--VLGDCQVFP 204
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 230 bits (563), Expect = 1e-61
Identities = 120/211 (56%), Positives = 149/211 (70%), Gaps = 1/211 (0%)
Frame = +1
Query: 43 MVNFTVXEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 222
MV FT E+R +M K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60
Query: 223 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEV 399
DEQ+R +TIKSTAIS+F E+ + D+ D +E ++ FL+NLIDSPGHVDFSSEV
Sbjct: 61 ADEQERGVTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEV 115
Query: 400 TAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXY 579
TAALRVTDGAL QTETVLRQA+ ERI+P++ +NK+DR Y
Sbjct: 116 TAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELY 175
Query: 580 QTFQRIVXNVNVIIATYNDDGGPMGEVRVXP 672
Q F R+V +VNV+I+TY D +G+ +V P
Sbjct: 176 QNFARVVESVNVVISTYYDK--VLGDCQVFP 204
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 157 bits (380), Expect = 2e-39
Identities = 87/185 (47%), Positives = 116/185 (62%)
Frame = +1
Query: 76 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIK 255
+ + NIRN +++AHVDHGK+TL DSL++ GII+ AG RF D R+DE R IT+K
Sbjct: 12 LQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMK 71
Query: 256 STAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALX 435
S+AIS+FF++ I+ D++ + EK +LINLIDSPGHVDFSSEV++A R+ DGA
Sbjct: 72 SSAISLFFKV-------ISQNDEK-RVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFV 123
Query: 436 XXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVXNVNV 615
QT TVLRQA +RIK IL +NKMDR + R+V VN
Sbjct: 124 LVDAVEGVCSQTITVLRQAWIDRIKVILVINKMDRLITELKLSPIEAHYHLLRLVEQVNA 183
Query: 616 IIATY 630
+I T+
Sbjct: 184 VIGTF 188
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 90.2 bits (214), Expect = 2e-19
Identities = 62/171 (36%), Positives = 87/171 (50%), Gaps = 7/171 (4%)
Frame = +1
Query: 49 NFTVXEIRGMMDKKR--NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA--GETRF-- 210
N + E DKKR IRN+ + AH+D GK+T T+ ++ G I G+
Sbjct: 41 NLNIQEQLNDNDKKRLKQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGA 100
Query: 211 -TDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDF 387
D + E+++ ITI+S A +E + N Q+ EK + IN+ID+PGH+DF
Sbjct: 101 KMDFMELEREKGITIQSAATHCTWERTVDQIE--ANEKQKTDFEKSYNINIIDTPGHIDF 158
Query: 388 SSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 540
+ EV ALRV DGA+ QT TV RQ + I F+NKMDR
Sbjct: 159 TIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDR 209
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 77.4 bits (182), Expect = 2e-15
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Frame = +1
Query: 94 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT--DTRKDEQDRCITIKSTAI 267
+IRN+ +IAH+D GK+TLT+ ++ G + +T T D E+ R ITI S AI
Sbjct: 27 SIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINSAAI 86
Query: 268 SMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXX 447
S + +QR INLID+PGH DF+ EV ++ V DGA+
Sbjct: 87 SFTWR------------NQR--------INLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126
Query: 448 XXXXXXQTETVLRQAIAERIKPILFMNKMDR 540
QT+ V +QA I ++F+NKMDR
Sbjct: 127 SAGVEAQTKVVWKQATKRGIPKVIFVNKMDR 157
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 76.2 bits (179), Expect = 4e-15
Identities = 52/174 (29%), Positives = 82/174 (47%)
Frame = +1
Query: 67 IRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCI 246
+RG+ + +RN +VIAH+DHGKSTL+D ++ G+I +F D + E+ R I
Sbjct: 50 VRGIPQNR--VRNWAVIAHIDHGKSTLSDCILKLTGVI-NEHNFRNQFLDKLEVERRRGI 106
Query: 247 TIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 426
T+K+ SM + + +L+NLID+PGHVDF +EV +L +G
Sbjct: 107 TVKAQTCSMIYYYH----------------GQSYLLNLIDTPGHVDFRAEVMHSLAACEG 150
Query: 427 ALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTF 588
+ QT + A ++ + I +NK+D QTF
Sbjct: 151 CILLVDASQGIQAQTLSNFYMAFSQNLVIIPVLNKVDLPTADVDRTLIQVQQTF 204
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 73.7 bits (173), Expect = 2e-14
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 1/190 (0%)
Frame = +1
Query: 73 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI-IAGARAGETRFTDTRKDEQDRCIT 249
G++ ++R+ V H+ HGKS L D LV + R+TDT E++R ++
Sbjct: 132 GLLTGTDDVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMS 191
Query: 250 IKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 429
IKST +++ D + K+ F ID+PGHVDF EV A + ++DG
Sbjct: 192 IKSTPLTLAVS------------DMKGKT---FAFQCIDTPGHVDFVDEVAAPMAISDGV 236
Query: 430 LXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVXNV 609
+ T +++ AI + +L +NK+DR Y + ++ V
Sbjct: 237 VLVVDVIEGVMINTTRIIKHAILHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEV 296
Query: 610 NVIIATYNDD 639
N I + D
Sbjct: 297 NDNICQISKD 306
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 41.1 bits (92), Expect = 1e-04
Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 1/152 (0%)
Frame = +1
Query: 85 KKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTA 264
KK ++ N+ I HVDHGK+TLT ++ + A + D +E+ R ITI S
Sbjct: 50 KKPHV-NIGTIGHVDHGKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAH 108
Query: 265 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 444
+ +E + +D PGH D+ + DGA+
Sbjct: 109 VE--YETANRHYAH------------------VDCPGHADYIKNMITGAATMDGAIIVVS 148
Query: 445 XXXXXXXQTETVLRQAIAERIKPI-LFMNKMD 537
QT L A +K I +++NK+D
Sbjct: 149 ATDGQMPQTREHLLLARQVGVKQIVVYINKVD 180
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.021
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 79 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 174
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.021
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 79 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 174
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.021
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 79 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 174
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 29.9 bits (64), Expect = 0.35
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 106 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR----FTDTRKDEQDRCITIKSTAISM 273
++++ HVDHGK+TL D+ K+ I + G T+ FT D+ + IT T M
Sbjct: 174 VTLMGHVDHGKTTLLDAF-RKSTIASTEHGGITQKIGAFT-VPFDKGSKFITFLDTPGHM 231
Query: 274 FFELEEK 294
FE K
Sbjct: 232 AFEAMRK 238
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = +1
Query: 136 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 315
K+ +T L S+ ++A A R+ D + ++ I +ST +S F D++FI
Sbjct: 462 KAGITTILNSRTSVLAAANPIFGRYDDMKTPGEN--IDFQSTILSRF------DMIFIVK 513
Query: 316 PDQREKSEKGFLINLIDSPGHVDFSSEVTA 405
+ E ++ ++I+ ++ SSE A
Sbjct: 514 DEHDETKDRNIARHVINLHTNLQESSETLA 543
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 28.3 bits (60), Expect = 1.1
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = +1
Query: 103 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 282
N+ I HVD GKSTL +++ G++ R E + E + S A+ E
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMV-DKRTMEK--IEREAKEAGKESWYLSWALDSTSE 296
Query: 283 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDF-SSEVTAALRVTDGAL 432
EK E + F +L+D+PGH + ++ + A + G L
Sbjct: 297 EREKGKTVEVGRAYFETEHRRF--SLLDAPGHKGYVTNMINGASQADIGVL 345
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -3
Query: 479 TVSVCTHTPD-TQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 303
T + C+ P+ T ST + +V+ S + ++ ST P ++ + S S V +
Sbjct: 575 TTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPSSTLSMTTSHLS-----SSSVHS 629
Query: 302 TKSFSSSSKNIEMAV 258
+ + SSSS++ M++
Sbjct: 630 SSAHSSSSRSSSMSL 644
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 1.4
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 482 STVSVCTHTPDTQSTT-TRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 306
+T S + +P + STT T +PS + S++ +S S+ S S S S
Sbjct: 135 TTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 194
Query: 305 NTKSFSSSSKNIEMAV 258
++ S SSSS + + +
Sbjct: 195 SSSSSSSSSSSSSVPI 210
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -3
Query: 485 RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 306
++TVS + + T S+++ +PS + + TS S+ S S S S
Sbjct: 124 QTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSS 183
Query: 305 NTKSFSSSSKN 273
++ S SSSS +
Sbjct: 184 SSSSSSSSSSS 194
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 392 EEKSTCPGESIKLIKKPFSLFSRWSGFVMNTKSFSS-SSKNIEMAVDLMVMQRSCSSLRV 216
EE + P + K KK S F+ T +S S++NI+ A+DL+ + S S ++
Sbjct: 66 EEMESLPSKGGKGSKKAAKKNSSLDAFLNETPQTASYSARNIDDALDLLSLNNSSSKDKI 125
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 5.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 344 PFSLFSRWSGFVMNTK-SFSSSSKNIEMAVDLMVMQR 237
P S +S W+ V+NTK SFS ++M +L+ Q+
Sbjct: 168 PKSTYSYWAS-VLNTKASFSKKKSRVQMVKELIDGQK 203
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.8 bits (54), Expect = 5.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 94 SASCPSSHGSRLP*NSPF*MVYDFCXIK 11
+ASCP SH L + PF + + C IK
Sbjct: 417 TASCPLSHSKLLLEHRPFQTLAEACIIK 444
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 7.5
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = -3
Query: 482 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 303
S+ S T TP + STT+ + S + S ++S S+ + + S S S +
Sbjct: 140 SSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSS-SASSSGSISSAD 198
Query: 302 TKSFSSSSKN 273
K+ S+SS +
Sbjct: 199 AKTVSASSNS 208
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 99 DIPLLVHHPTDLXYREIHHFRWFMIFVLLNQL 4
D P + +H D ++E H RW + +LLN++
Sbjct: 318 DNPHIHYHYFDF-HKECSHMRWDRVSLLLNEI 348
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 128 ITASQPSRTRWFPR-PVSLLVREPERPVSLTRVRTNK 235
+T S T + P P S + REP P+S R+R+++
Sbjct: 48 LTPEPSSNTFYAPSSPASAVRREPLSPMSFVRMRSHR 84
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 103 NMSVIAHVDHGKSTLTDSL 159
N+ I HV HGKST+ ++
Sbjct: 25 NIGTIGHVAHGKSTVVKAI 43
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 25.0 bits (52), Expect = 9.9
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 22 KNHKPSKMVNFTVXEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 180
K P+ +V+ V EI + K + ++ V HVD GKST+ ++ + G I
Sbjct: 155 KKQNPTDLVS--VPEIFEQSNPKPVV-HLVVTGHVDSGKSTMLGRIMFELGEI 204
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 395 K*QLHSVSLMEPLWLLTVCLVCVYKPKQYCVRLLPSASSLF 517
K Q+H +SL + W +T + C P +C + S + ++
Sbjct: 120 KNQVHLLSLSKGSWEVTNTISCEKTPLLFCATVQISGNEIY 160
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 440 LTVCLVCVYKPKQYCVRLLPSASSLFCS*TKWTVLFLSSNLKLKN 574
L V + YK + RL +A S+ C WT LF SN+ +N
Sbjct: 348 LNVIGIAAYKLEDPVHRLFVTAFSVCCECLAWTSLF--SNISPEN 390
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,682,712
Number of Sequences: 5004
Number of extensions: 52490
Number of successful extensions: 194
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -