Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_N20
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 35 0.064
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 31 0.78
Z80217-4|CAB02290.1| 213|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z49132-11|CAA88991.1| 400|Caenorhabditis elegans Hypothetical p... 29 4.2
Z48585-11|CAA88487.1| 400|Caenorhabditis elegans Hypothetical p... 29 4.2
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 29 5.5
U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 28 9.6
U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchanger... 28 9.6
U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchanger... 28 9.6
U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchanger... 28 9.6
AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calciu... 28 9.6
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.064
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 228 ALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 389
AL++L K G KY G ++T+ADLS+ + S ++D Y V R ET+
Sbjct: 141 ALEILLKQHSG-KYAVGDDVTIADLSIPPLIYSANRFNLDLSPYPTVNRINETL 193
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 210 NEKVQEALQLLDKFLEGQ--KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKR 374
N V + L++ L+ KY G LT+AD++L + + + + +D KY + R
Sbjct: 132 NHFVNKGFLALEELLKKHSGKYCVGDQLTIADINLPSIIYNAKIYKVDMSKYPTITR 188
>Z80217-4|CAB02290.1| 213|Caenorhabditis elegans Hypothetical
protein F37B1.4 protein.
Length = 213
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Frame = +3
Query: 237 LLDKFLEGQK--YVAGPNLTVADLSLIASVSSLE---ASDIDFKKYANVKRWYETVKST 398
LL++ L+ K Y+ G LT ADL + ++ SLE A D D + + N+K++ E + T
Sbjct: 140 LLNRILKKSKSGYLVGDGLTWADLVIADNLHSLEKLRAIDDDDEGHQNLKKYKEKIYGT 198
>Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical
protein Y57G11A.1b protein.
Length = 500
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 297 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAFKGLVN 458
D ++I E +++F+ ++K +W E TA + A K LEA KG V+
Sbjct: 78 DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVS 132
>Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical
protein Y57G11A.1a protein.
Length = 598
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 297 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAFKGLVN 458
D ++I E +++F+ ++K +W E TA + A K LEA KG V+
Sbjct: 78 DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVS 132
>Z49132-11|CAA88991.1| 400|Caenorhabditis elegans Hypothetical
protein ZK673.9 protein.
Length = 400
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 14 IWESRAIITSLVHKSAKGSSLYPVIPQSSC 103
+W+ R IT L S G + YP P+S+C
Sbjct: 59 LWQVRNTITQLFGSSRIGPTKYPADPRSTC 88
>Z48585-11|CAA88487.1| 400|Caenorhabditis elegans Hypothetical
protein ZK673.9 protein.
Length = 400
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 14 IWESRAIITSLVHKSAKGSSLYPVIPQSSC 103
+W+ R IT L S G + YP P+S+C
Sbjct: 59 LWQVRNTITQLFGSSRIGPTKYPADPRSTC 88
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 24 PAPSSPPWCTSPLRAAVCTP*SP 92
PAPS+PP P AAV TP +P
Sbjct: 319 PAPSAPPLSPEPAIAAVKTPKTP 341
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 24 PAPSSPPWCTSPLRAAVCTP*SP 92
PAPS+PP P AAV TP +P
Sbjct: 319 PAPSAPPLSPEPAIAAVKTPKTP 341
>U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical
protein T07H6.5 protein.
Length = 575
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 225 PVPSRSWPCRLGHRRILGDRNNH*XXGTKFRCRN 124
P+ +WP R+ H RIL +++H K+ C N
Sbjct: 375 PLSCHNWPPRVPHARILFSKSSH-GSIAKYECNN 407
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +3
Query: 3 IVFQSGSPAPSSPPWCTSPLRAAVCTP 83
++F++G P+ +SPP+ + P + +CTP
Sbjct: 1125 LMFRNG-PSETSPPFSSLPPESEICTP 1150
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +3
Query: 3 IVFQSGSPAPSSPPWCTSPLRAAVCTP 83
++F++G P+ +SPP+ + P + +CTP
Sbjct: 1125 LMFRNG-PSETSPPFSSLPPESEICTP 1150
>U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformd protein.
Length = 950
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 353 LEVNVRGFQAGDTGDETQVG 294
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchangers
protein 2, isoforma protein.
Length = 975
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 353 LEVNVRGFQAGDTGDETQVG 294
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformb protein.
Length = 925
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 353 LEVNVRGFQAGDTGDETQVG 294
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 925
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 353 LEVNVRGFQAGDTGDETQVG 294
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,756,057
Number of Sequences: 27780
Number of extensions: 352921
Number of successful extensions: 1003
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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