Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N19
         (545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ...    30   1.8  

>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
           protein.
          Length = 2779

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -3

Query: 177 RXRLT*YKKGRQEDXTNEERLEXTKKN*RPFEXLKKEGTSVGEXVLERPAECNE 16
           R +LT  K+GRQE   NE R E  K+  +  E L+  G  +   + +R  E  +
Sbjct: 229 RMKLTELKQGRQEQELNELRTELAKRA-KLIERLELSGAELQRTLTQRNEELEQ 281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,365,772
Number of Sequences: 53049
Number of extensions: 260477
Number of successful extensions: 341
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)