Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_N16
(546 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 34 0.016
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.048
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 32 0.048
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 31 0.11
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 30 0.19
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 28 1.0
SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|... 27 1.4
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 1.8
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 1.8
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 1.8
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 1.8
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 2.4
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.4
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 26 3.2
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 3.2
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 3.2
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 3.2
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 26 3.2
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 26 4.2
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 25 5.5
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.3
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.3
SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase Rdp1|Schizosa... 25 7.3
SPAPB1A10.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.6
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 33.9 bits (74), Expect = 0.016
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = +2
Query: 158 ATSNSTTXPATEFTPRLKVPSRTSTQ--NTPPSKLRVPTST----LPLTDNPSTSPTSLT 319
+++NSTT +T TP V S T+T +TP + + T+T PLT STS TS +
Sbjct: 328 SSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSAS 387
Query: 320 RT 325
T
Sbjct: 388 ST 389
Score = 30.7 bits (66), Expect = 0.15
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +2
Query: 167 NSTTXPATEFTPRLKVPSRTSTQ--NTPPSKLRVPTST----LPLTDNPSTSPTSLTRT 325
NSTT + TP V S T+T +TP + + T+T PLT STS TS + T
Sbjct: 445 NSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASST 503
Score = 27.9 bits (59), Expect = 1.0
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 158 ATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTST----LPLTDNPSTSPTSLTRT 325
ATS S T + ++ +PS T + +TP S T+T PLT ST+ TS + T
Sbjct: 264 ATSASATSSSAQYNTSSLLPSSTPS-STPLSSANSTTATSASSTPLTSVNSTTTTSASST 322
Score = 25.4 bits (53), Expect = 5.5
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 167 NSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREA 346
NST+ + TP S TST + + +S LP + ST +S T A
Sbjct: 493 NSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTAT--SA 550
Query: 347 ICPPLT 364
PLT
Sbjct: 551 SSTPLT 556
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 32.3 bits (70), Expect = 0.048
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPR 340
T NSTT P T P P+ TS+ +TPP ++ + PSTS + T T P
Sbjct: 294 TGNSTT-PVTPTVP----PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPT 348
Query: 341 EAICPPLT 364
P+T
Sbjct: 349 GNSTTPVT 356
Score = 30.3 bits (65), Expect = 0.19
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 149 PCKATSNSTTXPATEFTPRL--KVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTR 322
P + TS S T + TP + S +S T S +P+++ T + S PT +
Sbjct: 69 PVEITSTSCTTDTSASTPIITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSS 128
Query: 323 TVTNPREAICPP 358
+++ P PP
Sbjct: 129 SLSTPITPTVPP 140
Score = 29.9 bits (64), Expect = 0.26
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 173 TTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAIC 352
T P + + + +P TST +T + +PT++ T + S PT + +++ P
Sbjct: 137 TVPPTSTSSTSIPIPP-TSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTV 195
Query: 353 PP 358
PP
Sbjct: 196 PP 197
Score = 29.9 bits (64), Expect = 0.26
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPP---SKLRVPTSTLPL--TDNPSTSPTSL--T 319
T NSTT P T P P+ TS+ +TPP S TS+ PL T T+ TS+ T
Sbjct: 348 TGNSTT-PVTPTVP----PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPT 402
Query: 320 RTVTNPREAICPP 358
T P PP
Sbjct: 403 GNSTTPVTPTVPP 415
Score = 28.3 bits (60), Expect = 0.78
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +2
Query: 149 PCKATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 328
P TS S+T + P TST + PP+ ST P+T P+ PTS + T
Sbjct: 262 PIPPTSTSSTDTNSSPLPTTSTSCTTST-SIPPTG----NSTTPVT--PTVPPTSTSSTS 314
Query: 329 TNPREA 346
T P A
Sbjct: 315 TPPPPA 320
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 173 TTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
T P + + + +P TST +T + +PT++ T + S PT + T P
Sbjct: 250 TVPPTSTSSTSIPIPP-TSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTP 303
Score = 27.5 bits (58), Expect = 1.4
Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Frame = +2
Query: 149 PCKATSNSTTXPATEFTPRLKVPSRTSTQ--NTPPSKLRVP-TSTLPLTDNPSTS----P 307
P TS S+T + P TST S L P T T+P T STS P
Sbjct: 206 PIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPP 265
Query: 308 TSLTRTVTN 334
TS + T TN
Sbjct: 266 TSTSSTDTN 274
Score = 27.5 bits (58), Expect = 1.4
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +2
Query: 149 PCKATSNSTTXP----ATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL 316
P +S ST P ++ T +PS +++ T S ST P+T P+ PTS
Sbjct: 307 PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVT--PTVPPTST 364
Query: 317 TRTVTNPREA 346
+ T T P A
Sbjct: 365 SSTSTPPPPA 374
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
+S+ +T T +P T TP + PTST + P + TS T T ++P
Sbjct: 328 SSSPLPSTSTSCTTSTSIPP-TGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSP 385
Score = 26.2 bits (55), Expect = 3.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 149 PCKATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTST-LPLTDNPSTSPTSLTRT 325
P +TS+++T P P + TS+ P + TST +P T N ST+P + T
Sbjct: 306 PPTSTSSTSTPPP----PASTSSTGTSSSPLPSTSTSCTTSTSIPPTGN-STTPVTPTVP 360
Query: 326 VTNPREAICPP 358
T+ PP
Sbjct: 361 PTSTSSTSTPP 371
Score = 25.4 bits (53), Expect = 5.5
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPP---SKLRVP-TSTLPLTDNPSTS------PT 310
+S STT ++ P TST P S L P T T+P T STS T
Sbjct: 96 SSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTST 155
Query: 311 SLTRTVTNP 337
S T T +NP
Sbjct: 156 SSTDTNSNP 164
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 32.3 bits (70), Expect = 0.048
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 158 ATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
ATS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1608 ATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1667
Score = 31.1 bits (67), Expect = 0.11
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1588 TSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1602 TSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1660
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1616 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1674
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1623 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1681
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1630 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1688
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1637 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1695
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1644 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1702
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1651 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1709
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1658 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1716
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1665 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1723
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1672 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1730
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1679 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1737
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1686 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1744
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1693 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1751
Score = 30.3 bits (65), Expect = 0.19
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 149 PCKATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 328
P +TS + + ++P S TS +P S PTS +PS SPTS + +
Sbjct: 1563 PGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSP 1622
Query: 329 TNP 337
T+P
Sbjct: 1623 TSP 1625
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++P S TS + S PTS +PS SPTS + + T+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
TS S + + ++ S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1595 TSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Score = 25.8 bits (54), Expect = 4.2
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 164 SNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 337
S S T P+ ++P S TS +P S TS +PS SPTS + + T+P
Sbjct: 1577 SYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSP 1632
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 224 TSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPP 358
TS P S PTS +PS SPTS + + T+P + P
Sbjct: 1567 TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSP 1611
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 31.1 bits (67), Expect = 0.11
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 158 ATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV-TN 334
+T + T+ T P ++T PP+ T+T+P T + +T+ T+ T N
Sbjct: 57 STHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHVN 116
Query: 335 PREAICPPLT 364
+ PP T
Sbjct: 117 STTTVVPPTT 126
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 30.3 bits (65), Expect = 0.19
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 149 PCKATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 328
P A + + ++ PR P ++ +N PP + P LP T P T T+
Sbjct: 411 PSTANDTNGSSSSSSSNPRTSSPLASNAENKPPVAQQSPPVLLP------TLPPIQTTTI 464
Query: 329 TNPREAICPP 358
RE PP
Sbjct: 465 QTSREVAPPP 474
Score = 25.4 bits (53), Expect = 5.5
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +2
Query: 212 VPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPPLT 364
+PS N PS P+ P N STS S +P + P T
Sbjct: 363 IPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPASASPLASTLKPST 413
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 263 PTSTLPLTDNPSTSPTSLTRTVTNPREAICPPL 361
PT TD S PT+L TN E PP+
Sbjct: 529 PTKPFSATDISSVQPTNLPNGSTNGTETFIPPV 561
>SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|chr
2|||Manual
Length = 403
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +2
Query: 140 RHHPCKATSNSTTXPATEFTPRLKVPSRTSTQNTPP--SKLRVPTSTLPLTDNPSTSPTS 313
+ P + SN+TT SRT NT P S V T P+ + +T P+S
Sbjct: 71 QQQPTTSFSNTTTNAPQSTVFGQNAASRTGNSNTQPLFSWSTVNNPTKPVDETNATIPSS 130
Query: 314 L 316
L
Sbjct: 131 L 131
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 290 NPSTSPTSLTRTVTNPREAICPPL--TQFPRRS 382
NP ++P S R+ +NPR+ PP T +P RS
Sbjct: 23 NPVSTPNSHFRSASNPRKRREPPTIDTGYPDRS 55
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 188 TEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDN--PSTSPTSLTRTVTN 334
T T + + S +TP S L P L ++DN S+S T+ T++N
Sbjct: 416 TAITSIYQFANLLSPADTPDSYLAAPKERLSISDNMSSSSSQTATVNTISN 466
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.1 bits (57), Expect = 1.8
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = +2
Query: 143 HHPCKATSNSTTXPATEFTPRLKVPSRTSTQNTPP----SKLRVPTSTLPLTDNPSTSPT 310
H P K SN TE + VPS ++ P S +R P+ T P + + T
Sbjct: 360 HSPVKPVSNEQVEQVTEVELSIPVPSIQEAESQKPVLTGSSMRRPSVTSPTFEVAARPLT 419
Query: 311 SL 316
S+
Sbjct: 420 SM 421
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 215 PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTN 334
P+ ++ T S VPT T+ + S++P SLT + T+
Sbjct: 248 PTESTFYETKSSTSSVPTQTIDSSSFTSSTPVSLTSSSTS 287
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 2.4
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 6/104 (5%)
Frame = +2
Query: 215 PSRTSTQNTPPSK-LRVPTSTLPLTDNPSTSPTSLTRT----VTNPREAICPPLTQFPRR 379
PS +S + PS + +PT +L + NPS +P V N +I FP
Sbjct: 269 PSLSSQPVSVPSNTINIPTDSLSIVSNPSQTPAKFDSNRISQVPNSDYSIYSNFNNFPIA 328
Query: 380 SXXXXXXXXXXXXXXXXWKEKSSPTC*DKSRQQHTATS-TNETD 508
+ + S PT S +TS TN D
Sbjct: 329 NHAPSFPQSSVKKLDSSFSPTSLPTFTTNSASSGLSTSYTNNND 372
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 221 RTSTQNTPPSKLRVPTSTLPLTDNPS--TSPTSLTRTVTNPREAICPPLTQFP 373
R + + PP P +++PL N ++ S + T +NP + PP++ P
Sbjct: 113 RLALKRPPPDSHDSPNNSIPLMANSCLLSADNSSSSTTSNPN--VAPPISTLP 163
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 197 TPRLKVPSRTSTQNTPPSKLRVPTST 274
TP+LK+PS+ T N ++ V TS+
Sbjct: 1169 TPKLKIPSQQVTVNNTLQQIHVHTSS 1194
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 155 KATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTS 313
K+ S + PAT T K +T + P++T + PST PTS
Sbjct: 515 KSKSAAYHYPATTETVSSKAARSATTPAYVGGATKTPSTTKAVESTPSTLPTS 567
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +2
Query: 188 TEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL-TRTVTNPREA 346
T TP P+ S + PP R+P LP P+S T+ REA
Sbjct: 33 TVSTPAFMEPAPVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPPTHQREA 86
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 149 PCKATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRT 325
P + S + +T +P +V TS + P L+VP T +P +PTS ++T
Sbjct: 190 PARVPSPKKSLSSTIKSPPSRVKLPTSILSKSPP-LKVPNKNRSSTFSPLRTPTSSSKT 247
Score = 25.4 bits (53), Expect = 5.5
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Frame = +3
Query: 360 SPNSRGDRPRSCLHRGPPPQ-----------PLRRGKKSRRQLVRISQDNNIPPLVQTKL 506
SP SR P S L + PP + PLR S + V + PP ++TKL
Sbjct: 206 SPPSRVKLPTSILSKSPPLKVPNKNRSSTFSPLRTPTSSSKTFVIVDHSTPSPPSIRTKL 265
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 26.2 bits (55), Expect = 3.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 263 PTSTLPLTDNPSTSPTSLTRTVTNPREAICPPLTQ 367
PT T P PSTS +S T T T P + P T+
Sbjct: 168 PTQTSP--GKPSTSESSQTDTSTRPANSQTPTTTR 200
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 122 SGQIQLRHHPCKATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 274
+G + +H P K + + P+T P V +S+ ++PPS P++T
Sbjct: 383 TGLLSKQHRPRKNINFTPLPPSTPSKPSTFVRPHSSSTDSPPSP-STPSNT 432
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.4 bits (53), Expect = 5.5
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 161 TSNSTTXPATEFTPRLKVPSRTSTQNTPPSKL---RVPTSTLPLT-DNPSTSPTSLTRTV 328
T++++ PAT + TST PP+ + VPT+T T P + T+LT T
Sbjct: 165 TTSTSCNPATVLI--VTTSGSTSTSCPPPTTILIVTVPTTTTTTTVGYPGSVTTTLTGTP 222
Query: 329 TN 334
+N
Sbjct: 223 SN 224
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.0 bits (52), Expect = 7.3
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Frame = +2
Query: 218 SRTSTQNTPPSKLRVPTST--------LPLTDNPSTSPTSLTRTVTNPR 340
SR + + S L PTST P DNPS+S S+ R+ + R
Sbjct: 483 SRAALSSRSQSNLLSPTSTGASNQPNYSPFADNPSSSNVSIPRSSSEAR 531
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 25.0 bits (52), Expect = 7.3
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +2
Query: 119 PSGQIQLRHHPCKATSNSTTXPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPS 298
P Q+ +NST TE +P ++P Q PP+K +P T+ S
Sbjct: 405 PKSQVGGETDTTDVINNSTPKEETEESPSTELPETGKEQ--PPNKAE---PAVP-TEASS 458
Query: 299 TSPTSLTRTVTNPREAICP 355
T P+ T PR ++ P
Sbjct: 459 TKPSEAAEEST-PRFSVRP 476
>SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase
Rdp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1215
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 536 KSNSLFPTLCQFRLY*WRYVVVLTYPNKL 450
K++ +FP+ QFR+ ++ V+ L P KL
Sbjct: 632 KNHDMFPSAFQFRMGGYKGVLSLAPPTKL 660
>SPAPB1A10.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 24.6 bits (51), Expect = 9.6
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 194 FTPRLKVPSRTS-TQNTPPSKLRVPTSTLPLTDNPSTSPTSLTR 322
F P K + + T +TPP+ + P S+LP P S TS R
Sbjct: 34 FVPTSKQAALSDITPDTPPA-FKTPYSSLPYNLVPQNSSTSKKR 76
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,829,179
Number of Sequences: 5004
Number of extensions: 34544
Number of successful extensions: 224
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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