Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N15
         (798 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.67 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.67 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.67 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.89 

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 0.67
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 436 NRWGNNSRNSTFGSDSNNSYNTDNGPSIDAYL-HPSMLEDPWAQLRQNT 579
           N   +N+ N+T  S++NN+ +  +GP  D  L     LE    Q +Q T
Sbjct: 204 NNSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQT 252



 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 436 NRWGNNSRNSTFGSDSNNSYNTDNGPSIDAYLHPSMLED 552
           N   NNS N+   S +NN+    +  + +  LH   L D
Sbjct: 194 NASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRD 232


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 27.1 bits (57), Expect = 0.67
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 436 NRWGNNSRNSTFGSDSNNSYNTDNGPSIDAYL-HPSMLEDPWAQLRQNT 579
           N   +N+ N+T  S++NN+ +  +GP  D  L     LE    Q +Q T
Sbjct: 204 NNSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQT 252



 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 436 NRWGNNSRNSTFGSDSNNSYNTDNGPSIDAYLHPSMLED 552
           N   NNS N+   S +NN+    +  + +  LH   L D
Sbjct: 194 NASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRD 232


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 27.1 bits (57), Expect = 0.67
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 436 NRWGNNSRNSTFGSDSNNSYNTDNGPSIDAYL-HPSMLEDPWAQLRQNT 579
           N   +N+ N+T  S++NN+ +  +GP  D  L     LE    Q +Q T
Sbjct: 156 NNSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQT 204



 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 436 NRWGNNSRNSTFGSDSNNSYNTDNGPSIDAYLHPSMLED 552
           N   NNS N+   S +NN+    +  + +  LH   L D
Sbjct: 146 NASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRD 184


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 436 NRWGNNSRNSTFGSDSNNSYNTDNGPSIDAYL-HPSMLEDPWAQLRQNT 579
           N  GNN+ N+T  S++NN+ +  +GP  D  L     LE    Q +Q T
Sbjct: 205 NSSGNNN-NNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQT 252



 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 436 NRWGNNSRNSTFGSDSNNSYNTDNGPSIDAYLHPSMLED 552
           N   NNS N+   S +NN+    +  + +  LH   L D
Sbjct: 194 NASSNNSNNNNNSSGNNNNNTISSNNNNNNSLHHGPLRD 232


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,116
Number of Sequences: 2352
Number of extensions: 13175
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)