Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N15
         (798 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppres...    33   0.90 
AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein...    33   0.90 
AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein.              33   0.90 
AB209707-1|BAD92944.1| 1720|Homo sapiens low density lipoprotein...    33   0.90 
BC026265-1|AAH26265.1|  179|Homo sapiens chromosome 7 open readi...    31   3.6  

>AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppressor
           protein protein.
          Length = 1537

 Score = 33.5 bits (73), Expect = 0.90
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = -3

Query: 472 QRCCSLNCYPIGYNHCVYDHYR--SENDCSDNS 380
           ++ C  + +    N+C+ DH+R  S+NDCSDNS
Sbjct: 797 KKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNS 829


>AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein
            receptor related protein-deleted in tumor protein.
          Length = 4599

 Score = 33.5 bits (73), Expect = 0.90
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = -3

Query: 472  QRCCSLNCYPIGYNHCVYDHYR--SENDCSDNS 380
            ++ C  + +    N+C+ DH+R  S+NDCSDNS
Sbjct: 3473 KKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNS 3505


>AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein.
          Length = 1126

 Score = 33.5 bits (73), Expect = 0.90
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = -3

Query: 472 QRCCSLNCYPIGYNHCVYDHYR--SENDCSDNS 380
           ++ C  + +    N+C+ DH+R  S+NDCSDNS
Sbjct: 331 KKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNS 363


>AB209707-1|BAD92944.1| 1720|Homo sapiens low density
           lipoprotein-related protein 1B variant protein.
          Length = 1720

 Score = 33.5 bits (73), Expect = 0.90
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = -3

Query: 472 QRCCSLNCYPIGYNHCVYDHYR--SENDCSDNS 380
           ++ C  + +    N+C+ DH+R  S+NDCSDNS
Sbjct: 594 KKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNS 626


>BC026265-1|AAH26265.1|  179|Homo sapiens chromosome 7 open reading
           frame 11 protein.
          Length = 179

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 445 GNNSRNSTFGSDSNNSYNTDNGPSIDAYLHPSMLEDPWAQL 567
           G+   ++ FGS         N   ++ Y  PSMLEDPWA L
Sbjct: 114 GSPRTSTPFGSGRVREKRMSN--ELENYFKPSMLEDPWAGL 152


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,156,843
Number of Sequences: 237096
Number of extensions: 1794692
Number of successful extensions: 2619
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2612
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)