Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_N11
(706 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 36 0.001
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 36 0.002
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 33 0.009
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 33 0.012
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.062
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 27 0.43
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 27 0.76
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 1.8
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 25 3.1
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 25 3.1
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 24 5.4
AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. 23 7.1
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 7.1
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 23 9.4
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 9.4
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 36.3 bits (80), Expect = 0.001
Identities = 28/152 (18%), Positives = 69/152 (45%)
Frame = +3
Query: 144 CEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESE 323
C + KD L+A+ A+ + + ++++++ E +L ++++ + ++ E+ + + E
Sbjct: 767 CSAKVKD--LQAKIADGKGHR-ERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLE 823
Query: 324 VAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDAL 503
+ L + I A +L E S DE A L+ + +E+M++
Sbjct: 824 IEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQ 883
Query: 504 ENQLKEARFLAEEADKKYDEVARKLAMVEADL 599
+LK ++ K+ DE+ ++ E ++
Sbjct: 884 SKELKAKYHQRDKLLKQNDELKLEIKKKENEI 915
Score = 23.8 bits (49), Expect = 5.4
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 147 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQV 272
E+Q K+ R + E++ +KKIQ I +LD+ ++ ++V
Sbjct: 993 EEQYKEVMRRKKVVEDD----KKKIQAIITDLDEEKKKKLKV 1030
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 35.5 bits (78), Expect = 0.002
Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +3
Query: 147 EQQAKDANLRAEKAEEEA--RQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAES 320
E + ++ LR E +LQK I+ + +LDQ + ++ Q + K+ A+ E+
Sbjct: 776 EGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVEA 835
Query: 321 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDA 500
E+A + I L ++++ +E +R R L + ++ R +A
Sbjct: 836 EIARIQASIDKEQQARHDLQTNHKVKQQALKRSTESMEERKRTRVALS--AALEQARQEA 893
Query: 501 LE 506
E
Sbjct: 894 SE 895
Score = 25.4 bits (53), Expect = 1.8
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 150 QQAKDANLRAEKAEEEAR--QLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESE 323
+Q K A + EKA+ + R +L I + + E+D ++ V EEK +SE
Sbjct: 438 EQRKQA-VETEKAQLKERNDELASMIASAQREVDLMYNTMAHVKDAREEKHHERCAKQSE 496
Query: 324 VAALNRRIQ 350
+ ++++
Sbjct: 497 TTRIEKQLE 505
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 33.1 bits (72), Expect = 0.009
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Frame = +3
Query: 147 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLM----QVNGKLEEKEKALQNA 314
E K+A +K EEA +L + I+ N T L Q+NG+L + + L+
Sbjct: 1434 EDARKNAQTAQDKYAEEASKLAENIKKRANATKNTARDLHHEADQLNGRLAKTDNRLEER 1493
Query: 315 ESEVA----ALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLAD 482
E+++ N + + + E S E R++ N SL D
Sbjct: 1494 EAQIRKDLNLTNEAKEKVGQAQLNSNEAKSQVDKAMREVSLIMSELANLREIDVN-SLDD 1552
Query: 483 -EERMDALENQLKEAR 527
E R+ A E +L++A+
Sbjct: 1553 LERRLSAAEKELEDAQ 1568
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 32.7 bits (71), Expect = 0.012
Identities = 33/149 (22%), Positives = 59/149 (39%)
Frame = +3
Query: 147 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEV 326
E K+ R + E+ R LQ+++ ++ QT+ + + K +E L N + E
Sbjct: 639 ENSIKELQERCAELREQKRDLQEQL----SKYQQTKMKVKRQEQKCKELTARLVNVDEEK 694
Query: 327 AALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALE 506
R + A + + AS+ D E+ ++ E R+ E LE
Sbjct: 695 VKFERSCRTIIEQLLDQQRRKVAALERYAAASREHDLLEQRIRLFEERNNDREANFRLLE 754
Query: 507 NQLKEARFLAEEADKKYDEVARKLAMVEA 593
+ + A+ K V +KLA V+A
Sbjct: 755 DAYQSAK-------KTLANVEKKLAEVKA 776
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.3 bits (65), Expect = 0.062
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Frame = +3
Query: 150 QQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNA----- 314
Q++KD + E+E Q I+ +E Q +E ++ +LEE + A++ A
Sbjct: 931 QKSKD---KINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSS 987
Query: 315 --ESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEE 488
+ E+ AL +R T KL E + K L+ + +E
Sbjct: 988 SIKKEIVALQKREAEGKMKRLEFEQILQTIETKLQETKDTLPHWQLQLKPLKLHEIPEEP 1047
Query: 489 RMDALENQLKE 521
+ L+ +E
Sbjct: 1048 PQEPLKEYTEE 1058
Score = 29.9 bits (64), Expect = 0.082
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 195 EARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 338
E ++K+Q NE + ++L V GKL+E A+Q+ S+ L+
Sbjct: 542 ELETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGKVLD 589
Score = 24.2 bits (50), Expect = 4.1
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +3
Query: 408 LSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMV 587
L E + E E R +E DAL+ + E L +E K+YDE+
Sbjct: 315 LCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDELVSAKESK 374
Query: 588 EADL 599
E+ L
Sbjct: 375 ESTL 378
Score = 24.2 bits (50), Expect = 4.1
Identities = 20/101 (19%), Positives = 39/101 (38%)
Frame = +3
Query: 231 ENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKL 410
E+EL Q + KLE + + E ++ R+Q TA KL
Sbjct: 491 ESELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKL 550
Query: 411 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFL 533
E + E + + ++ + +E M A+++ + + L
Sbjct: 551 QENANEERELTQTLRAVQGKL---QESMAAMQSTRSQGKVL 588
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 27.5 bits (58), Expect = 0.43
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 705 PXRLPEISGCYQRHGAPPQAQRFWIRRTRHA 613
P + E + C+QR+ A P+A R IRR A
Sbjct: 844 PLLIKEDARCHQRYLADPEASRAVIRREERA 874
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 26.6 bits (56), Expect = 0.76
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = +3
Query: 435 ESERARKVLENRSLADEERMDALE-------NQLKEARFLAEEADKKYDEV 566
+ E + E + ADEE D E ++L+EAR +AEE +++ E+
Sbjct: 76 DEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 25.4 bits (53), Expect = 1.8
Identities = 25/72 (34%), Positives = 30/72 (41%)
Frame = +2
Query: 188 RRRGETASEEDPDN*KRARPDTGVSHAG*RKARREGEGSAER*VRSGCPEPTYPTAGGGP 367
R+R + EED D +R S +G R R G GS R+G AG G
Sbjct: 1047 RKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGS-----RAG------SRAGSGS 1095
Query: 368 REVRGASRDRHR 403
R R SR R R
Sbjct: 1096 RS-RSRSRSRSR 1106
Score = 24.2 bits (50), Expect = 4.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 150 QQAKDANLRAEKAEEEARQLQKKIQTIENE 239
QQA+ RA K +EE R L++K Q +E E
Sbjct: 821 QQAQYHVSRARKIDEEERSLRQK-QELERE 849
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 24.6 bits (51), Expect = 3.1
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 480 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRT 373
PP S PY+ IHR P R + + PR+
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPRS 265
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 24.6 bits (51), Expect = 3.1
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = -2
Query: 543 PPQRGTWLPSADSRGRP--CAP--HPPTTCSRAP 454
PP R W P GRP P H PTT + AP
Sbjct: 90 PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 1 ESHHSTRRLDIFSSKGAEKTKPPK 72
+ HH ++L I SK A PP+
Sbjct: 814 DEHHDPQKLRIVVSKSANAMHPPR 837
>AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein.
Length = 412
Score = 23.4 bits (48), Expect = 7.1
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +3
Query: 147 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 305
E+Q A ++ +E + LQK++ + + + L+ N + E ++AL
Sbjct: 120 EEQLHAAQQETQQEQEMKKALQKQLDALTDSRNALYIDLLLANIAIGETKQAL 172
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.4 bits (48), Expect = 7.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 411 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKY 557
SE+S ++DES+ ++ S + EER E+ ++ ++ +E KY
Sbjct: 1926 SESSSSSDESD------DSNSSSSEERKPNREHFFEKQQYTEKECPVKY 1968
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 170 VGVFGLLLTHGSAVERI 120
V +FG+LLTHG + ++
Sbjct: 527 VSLFGVLLTHGYLIMQV 543
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.0 bits (47), Expect = 9.4
Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 4/127 (3%)
Frame = -2
Query: 654 PQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPHRISCRPPQRGTWLPSADSRGRPCA--PH 481
P A ++R + A PQP A P + PP R + P+ P A
Sbjct: 65 PSAVSSQLQRPQPTVLAASPAPQPSLAPVVPSSVVTAPPARPSQPPTTRFAPEPRAEVKF 124
Query: 480 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVG--SGQPLRTQRS 307
P+ + P VR + ++ P + S PPP + P R
Sbjct: 125 VPSVPLKTPPVRPLLPQQQQHPHQRDTGPALFPAPISHRPPPIAHQQAPFAMDPARPNPG 184
Query: 306 AEPSPSL 286
P P +
Sbjct: 185 MPPGPQM 191
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,827
Number of Sequences: 2352
Number of extensions: 10409
Number of successful extensions: 47
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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