Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N09
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.9  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   4.9  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   6.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.6  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 22  VIFLNTQHXVCCASXQKVFFLNFLPLKVSXXVV 120
           VIF +       AS   VFF  FLP+ VS  ++
Sbjct: 151 VIFFDVVVWGLSASDLGVFFKRFLPVYVSYLLI 183


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 201 SLKSYTNTINRPST 160
           SLK  TNTI R ST
Sbjct: 532 SLKQGTNTITRHST 545


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 210 TFSSLKSYTNTI 175
           +FS+  SYTNTI
Sbjct: 212 SFSAASSYTNTI 223


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 285 HQIHFNKHIHFYALFQNLSLSSHYLTFSSLK 193
           H+IH    + FY +F ++S       +S+L+
Sbjct: 24  HRIHSYFMVAFYVVFSSVSTFFKIPFYSTLR 54


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 285 HQIHFNKHIHFYALFQNLSLSSHYLTFSSLK 193
           H+IH    + FY +F ++S       +S+L+
Sbjct: 24  HRIHSYFMVAFYVVFSSVSTFFKIPFYSTLR 54


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 219  HYLTFSSLKSYT 184
            H+L  S+LK+YT
Sbjct: 1059 HHLKISNLKTYT 1070


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,595
Number of Sequences: 336
Number of extensions: 903
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)