Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N09
         (423 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.7  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   7.5  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   7.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   10.0 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   10.0 
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    20   10.0 
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    20   10.0 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   10.0 

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -1

Query: 258 HFYALFQNLSLSSHYLTFSSLKSYTNTINRPST*QLNN 145
           +FY+     + S+  + F   K    TINR ++  L+N
Sbjct: 142 YFYSKSNGSNSSNSDVLFKQNKEEEQTINRKNSDYLDN 179


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 207 RLDNVKTKKGFEITRRNECAY*SEFDEIVYKNNKIL 314
           R+++V      E+T    C    +F + +Y+N+K L
Sbjct: 107 RVESVVETCKKEVTSTEGCEVAWQFGKCIYENDKEL 142


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 207 RLDNVKTKKGFEITRRNECAY*SEFDEIVYKNNKIL 314
           R+++V      E+T    C    +F + +Y+N+K L
Sbjct: 81  RVESVVETCKKEVTSTEGCEVAWQFGKCIYENDKEL 116


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 52  CCASXQKVFFLNFL 93
           CC S + V+F+ +L
Sbjct: 356 CCPSDRMVYFITWL 369


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 52  CCASXQKVFFLNFL 93
           CC S + V+F+ +L
Sbjct: 356 CCPSDRMVYFITWL 369


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 258 HFYALFQNLSLSSHYLTFSSLKSYTNTINRP 166
           H Y ++++L         + L S  NT+ RP
Sbjct: 42  HTYIIYESLCGRHEKRLLNELLSSYNTLERP 72


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 258 HFYALFQNLSLSSHYLTFSSLKSYTNTINRP 166
           H Y ++++L         + L S  NT+ RP
Sbjct: 42  HTYIIYESLCGRHEKRLLNELLSSYNTLERP 72


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 52  CCASXQKVFFLNFL 93
           CC S + V+F+ +L
Sbjct: 356 CCPSDRMVYFITWL 369


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,119
Number of Sequences: 438
Number of extensions: 1167
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)