Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_N08
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70781-7|CAJ55254.1| 380|Caenorhabditis elegans Hypothetical pr... 111 6e-25
Z70781-6|CAA94831.2| 349|Caenorhabditis elegans Hypothetical pr... 111 6e-25
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 29 3.4
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 29 3.4
Z46935-5|CAL36508.1| 709|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z46935-3|CAE48508.1| 794|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z46935-2|CAA87052.1| 792|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z50742-1|CAA90614.2| 605|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z70781-7|CAJ55254.1| 380|Caenorhabditis elegans Hypothetical
protein F57A8.2b protein.
Length = 380
Score = 111 bits (266), Expect = 6e-25
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = +1
Query: 358 QISSMLQQPVVQDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAVDTRYVIRKLML 537
Q ++ P++ + A Q+G Q A Q KE +L K++ L+YYFAVD YV +KL +
Sbjct: 90 QPQQLMSDPML-NAAKQFGGQFAEQQKE----KLTKYLGTFNLKYYFAVDNAYVGKKLGI 144
Query: 538 IVFPYTHKEWMVKYDQDT-PVQPRYDINAPDLYIPSMGYVTYVLLAGFMLGLXHRFSPEQ 714
+ FP+ HK+W +K+ P R D+NAPDLYIP M ++TY+L++GF+LG RFSPE
Sbjct: 145 LFFPFFHKDWSLKFAGSADPAPAREDVNAPDLYIPLMSFLTYILVSGFVLGTQGRFSPEI 204
Query: 715 IGI 723
+GI
Sbjct: 205 LGI 207
>Z70781-6|CAA94831.2| 349|Caenorhabditis elegans Hypothetical
protein F57A8.2a protein.
Length = 349
Score = 111 bits (266), Expect = 6e-25
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = +1
Query: 358 QISSMLQQPVVQDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAVDTRYVIRKLML 537
Q ++ P++ + A Q+G Q A Q KE +L K++ L+YYFAVD YV +KL +
Sbjct: 90 QPQQLMSDPML-NAAKQFGGQFAEQQKE----KLTKYLGTFNLKYYFAVDNAYVGKKLGI 144
Query: 538 IVFPYTHKEWMVKYDQDT-PVQPRYDINAPDLYIPSMGYVTYVLLAGFMLGLXHRFSPEQ 714
+ FP+ HK+W +K+ P R D+NAPDLYIP M ++TY+L++GF+LG RFSPE
Sbjct: 145 LFFPFFHKDWSLKFAGSADPAPAREDVNAPDLYIPLMSFLTYILVSGFVLGTQGRFSPEI 204
Query: 715 IGI 723
+GI
Sbjct: 205 LGI 207
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
Y37A1B.17b protein.
Length = 1467
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 602 PGTTSTPRTCTYPPWGTSRTCCWPASC*VFXT 697
PGT+S+ T T PW T+ T PA+ + T
Sbjct: 932 PGTSSSSTTVTESPWATAPTFIPPAATEILPT 963
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 602 PGTTSTPRTCTYPPWGTSRTCCWPASC*VFXT 697
PGT+S+ T T PW T+ T PA+ + T
Sbjct: 932 PGTSSSSTTVTESPWATAPTFIPPAATEILPT 963
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
E01G6.1 protein.
Length = 1391
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 548 PILIRSGW*NTIKTLQCSPGTTSTPRTCTYPPWGTSRTCCWP 673
P + R G+ T +Q SP T+ P C Y P CC P
Sbjct: 948 PYISRDGFPPTCH-MQLSPCPTTAPYVCIYSPEKQDSYCCAP 988
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 602 PGTTSTPRTCTYPPWGTSRTCCWPASC*VFXT 697
PGT+S+ T T PW T+ T PA+ + T
Sbjct: 932 PGTSSSSTTVTESPWATAPTFIPPAATEILPT 963
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 602 PGTTSTPRTCTYPPWGTSRTCCWPASC*VFXT 697
PGT+S+ T T PW T+ T PA+ + T
Sbjct: 932 PGTSSSSTTVTESPWATAPTFIPPAATEILPT 963
>Z46935-5|CAL36508.1| 709|Caenorhabditis elegans Hypothetical
protein M106.4c protein.
Length = 709
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 525 ETNAHSLPLYS*GVDGEIRSRHSSAAPVRHQRPGP 629
+ +AH LP+ + GV G+ RS + A QRP P
Sbjct: 511 QISAHILPIKTVGVQGDARSYSYAVALSTEQRPIP 545
>Z46935-3|CAE48508.1| 794|Caenorhabditis elegans Hypothetical
protein M106.4b protein.
Length = 794
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 525 ETNAHSLPLYS*GVDGEIRSRHSSAAPVRHQRPGP 629
+ +AH LP+ + GV G+ RS + A QRP P
Sbjct: 596 QISAHILPIKTVGVQGDARSYSYAVALSTEQRPIP 630
>Z46935-2|CAA87052.1| 792|Caenorhabditis elegans Hypothetical
protein M106.4a protein.
Length = 792
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 525 ETNAHSLPLYS*GVDGEIRSRHSSAAPVRHQRPGP 629
+ +AH LP+ + GV G+ RS + A QRP P
Sbjct: 594 QISAHILPIKTVGVQGDARSYSYAVALSTEQRPIP 628
>Z50742-1|CAA90614.2| 605|Caenorhabditis elegans Hypothetical
protein K09A11.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 436 KEAVQRELHKFVPVSRLRYYFAVDTRY 516
KE ++RELHK+ L++ +D RY
Sbjct: 406 KEHMERELHKYTSCQYLKFSTLLDPRY 432
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,935,503
Number of Sequences: 27780
Number of extensions: 378354
Number of successful extensions: 881
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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