Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N07
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55375-5|AAC69045.1|  126|Caenorhabditis elegans Profilin protei...    82   3e-16
AY530910-1|AAT01435.1|  126|Caenorhabditis elegans profilin-3 pr...    82   3e-16
U40941-2|AAA81708.3|  131|Caenorhabditis elegans Profilin protei...    58   8e-09
AY530909-1|AAT01434.1|  131|Caenorhabditis elegans profilin-2 pr...    58   8e-09
AF016687-11|ABL01528.1|  646|Caenorhabditis elegans Hypothetical...    27   9.4  

>U55375-5|AAC69045.1|  126|Caenorhabditis elegans Profilin protein 3
           protein.
          Length = 126

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 43/126 (34%), Positives = 64/126 (50%)
 Frame = +1

Query: 106 MRWQASVXKQLMASSCVTKAAIAGHXGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 285
           M W   +   L+ S  V+KAAI G  G VWAKS+ F IS +E       F +   L   G
Sbjct: 1   MSWSDIINNNLIGSGNVSKAAILGFDGAVWAKSDNFNISVEEAVAAGKAFTSLDALLGTG 60

Query: 286 VTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEY 465
           + + G +++ L+  +  I  K G  G    KT QAV+IS+YE+ +QP+  +     L +Y
Sbjct: 61  LRLEGQKFLVLNADNDRIIGKQGGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADY 120

Query: 466 LITCGY 483
             +  Y
Sbjct: 121 FRSIKY 126


>AY530910-1|AAT01435.1|  126|Caenorhabditis elegans profilin-3
           protein.
          Length = 126

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 43/126 (34%), Positives = 64/126 (50%)
 Frame = +1

Query: 106 MRWQASVXKQLMASSCVTKAAIAGHXGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 285
           M W   +   L+ S  V+KAAI G  G VWAKS+ F IS +E       F +   L   G
Sbjct: 1   MSWSDIINNNLIGSGNVSKAAILGFDGAVWAKSDNFNISVEEAVAAGKAFTSLDALLGTG 60

Query: 286 VTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEY 465
           + + G +++ L+  +  I  K G  G    KT QAV+IS+YE+ +QP+  +     L +Y
Sbjct: 61  LRLEGQKFLVLNADNDRIIGKQGGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADY 120

Query: 466 LITCGY 483
             +  Y
Sbjct: 121 FRSIKY 126


>U40941-2|AAA81708.3|  131|Caenorhabditis elegans Profilin protein 2
           protein.
          Length = 131

 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
 Frame = +1

Query: 112 WQASVXKQLMASSCVTKAAIAGHXGNVWAKS---EGFEISKDEVAKIVAGFENESLLTSG 282
           W   +      S  + +AAI G  G+VWA+S     F  ++ E+ +  A F + + +   
Sbjct: 4   WDDYIKLLFGKSPAIKRAAIIGSDGSVWARSGDANAFRATEVELKRFAALFNDINSVPGT 63

Query: 283 GVTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYE-EPIQPQQAASVVEKLG 459
           G  +    YI     + +I  K  + G    KT QA+VI++YE +  Q     + VE + 
Sbjct: 64  GADLEEIHYIVPRVEEKLIFGKKEQTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIA 123

Query: 460 EYLITCGY 483
           +YL + GY
Sbjct: 124 QYLASSGY 131


>AY530909-1|AAT01434.1|  131|Caenorhabditis elegans profilin-2
           protein.
          Length = 131

 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
 Frame = +1

Query: 112 WQASVXKQLMASSCVTKAAIAGHXGNVWAKS---EGFEISKDEVAKIVAGFENESLLTSG 282
           W   +      S  + +AAI G  G+VWA+S     F  ++ E+ +  A F + + +   
Sbjct: 4   WDDYIKLLFGKSPAIKRAAIIGSDGSVWARSGDANAFRATEVELKRFAALFNDINSVPGT 63

Query: 283 GVTIAGTRYIYLSGTDHIIRAKLGKVGVHCMKTQQAVVISLYE-EPIQPQQAASVVEKLG 459
           G  +    YI     + +I  K  + G    KT QA+VI++YE +  Q     + VE + 
Sbjct: 64  GADLEEIHYIVPRVEEKLIFGKKEQTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIA 123

Query: 460 EYLITCGY 483
           +YL + GY
Sbjct: 124 QYLASSGY 131


>AF016687-11|ABL01528.1|  646|Caenorhabditis elegans Hypothetical
           protein T21D12.7 protein.
          Length = 646

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 126 RQTVNGI*LCHKSCHCRSXWQCVGKVGR 209
           R ++N I  C +  HC   + C  KVG+
Sbjct: 189 RYSINNIATCMEDKHCPRNYTCTSKVGK 216


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,880,489
Number of Sequences: 27780
Number of extensions: 294419
Number of successful extensions: 686
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)