Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_N02
(336 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 149 1e-35
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 137 5e-32
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 137 5e-32
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 121 4e-27
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 114 4e-25
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 106 1e-22
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 95 3e-19
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 91 6e-18
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 88 3e-17
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 83 1e-15
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 74 7e-13
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 73 1e-12
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 68 5e-11
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 60 1e-08
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 55 3e-07
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 52 3e-06
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 51 4e-06
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 51 4e-06
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 51 4e-06
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 44 2e-05
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 47 7e-05
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 47 7e-05
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 46 1e-04
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 42 0.003
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 40 0.015
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 34 0.55
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 34 0.55
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 34 0.72
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 31 3.8
UniRef50_UPI00006A22DC Cluster: UPI00006A22DC related cluster; n... 31 5.1
UniRef50_A0CB14 Cluster: Chromosome undetermined scaffold_163, w... 31 6.7
UniRef50_A0U307 Cluster: Putative uncharacterized protein; n=2; ... 30 8.9
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 149 bits (361), Expect = 1e-35
Identities = 69/97 (71%), Positives = 73/97 (75%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
KPV VHSR RVRKNTE RRKGRHCGFGKR+GTANARMP K LW +
Sbjct: 53 KPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDS 112
Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+K A+K
Sbjct: 113 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEK 149
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 137 bits (331), Expect = 5e-32
Identities = 63/98 (64%), Positives = 71/98 (72%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
KPV VHSRAR RKNT RRKGRH G GKR+GTANARMP+K W +
Sbjct: 45 KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 104
Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ ADKA
Sbjct: 105 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 142
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 137 bits (331), Expect = 5e-32
Identities = 63/98 (64%), Positives = 71/98 (72%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
KPV VHSRAR RKNT RRKGRH G GKR+GTANARMP+K W +
Sbjct: 53 KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 112
Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ ADKA
Sbjct: 113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 150
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 121 bits (291), Expect = 4e-27
Identities = 56/97 (57%), Positives = 67/97 (69%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
KPV VHSR+R RKN RRKGRH G GKR+GTA+ARMPQK LW A
Sbjct: 53 KPVTVHSRSRCRKNLIARRKGRHTGTGKRKGTADARMPQKVLWMRRMRVLRRLLKRYREA 112
Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
KID+HLYH LY + KGN FKNKRVL+++IH+K A++
Sbjct: 113 HKIDKHLYHLLYQQCKGNQFKNKRVLIDHIHKKKAER 149
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 114 bits (274), Expect = 4e-25
Identities = 51/94 (54%), Positives = 62/94 (65%)
Frame = +2
Query: 53 VHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKID 232
+HSRAR + +R GRH G+GKRRGT AR+P K LW AKKID
Sbjct: 77 IHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKID 136
Query: 233 RHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
+H+YHS+Y+K KGNVFKNKRVLME IH+ A+KA
Sbjct: 137 KHMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKA 170
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 106 bits (254), Expect = 1e-22
Identities = 51/97 (52%), Positives = 61/97 (62%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
KPV VHSRAR RK E + GRH G G+R G+ ARMP KELW
Sbjct: 73 KPVKVHSRARWRKMKEAKDMGRHNGVGRREGSREARMPSKELWMRRLRILRRLLRKYRAD 132
Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
KKIDRH+Y LYM+AKGNVF+NKR L+E+IH+ +K
Sbjct: 133 KKIDRHVYRDLYMRAKGNVFRNKRNLVEHIHKIKNEK 169
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 95.1 bits (226), Expect = 3e-19
Identities = 45/84 (53%), Positives = 52/84 (61%)
Frame = +2
Query: 59 SRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 238
SR R+R +R GRH G GKRRGT ARMP K LW +KIDRH
Sbjct: 59 SRGRIRARHAAKRLGRHSGHGKRRGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRH 118
Query: 239 LYHSLYMKAKGNVFKNKRVLMEYI 310
LY +LY KAKGN+FKNKRVL+E+I
Sbjct: 119 LYETLYAKAKGNMFKNKRVLLEHI 142
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 90.6 bits (215), Expect = 6e-18
Identities = 46/98 (46%), Positives = 58/98 (59%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
KPV VHS+A KNT KGRH GK +GTAN +P++ W +
Sbjct: 53 KPVTVHSQAHCEKNT---LKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCES 109
Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
KKID H+ HSLY++ K NVFKN+ +LME IH+ ADKA
Sbjct: 110 KKIDCHMCHSLYLRVKRNVFKNQWILMEQIHKPKADKA 147
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 88.2 bits (209), Expect = 3e-17
Identities = 39/87 (44%), Positives = 54/87 (62%)
Frame = +2
Query: 56 HSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDR 235
HSR R+R E + GRH G GKR+G+ N+R K +W + K++R
Sbjct: 58 HSRNRIRSRKEEIKLGRHEGLGKRKGSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNR 117
Query: 236 HLYHSLYMKAKGNVFKNKRVLMEYIHR 316
HLY SLY+K+KGNVFKNK++L E+IH+
Sbjct: 118 HLYRSLYLKSKGNVFKNKKILTEFIHK 144
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 83.0 bits (196), Expect = 1e-15
Identities = 42/98 (42%), Positives = 56/98 (57%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
KPV VHS +R+ +G+ G + GTANARM +K W +
Sbjct: 508 KPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLRRYRES 567
Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
KKIDR +YHSL +K KGNVFKNK L+++IH+ AD+A
Sbjct: 568 KKIDRRMYHSLDLKVKGNVFKNKWSLVDHIHKLKADRA 605
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 73.7 bits (173), Expect = 7e-13
Identities = 38/90 (42%), Positives = 47/90 (52%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
KPV SR R R E ++KGRH G G R+G ARM +KELW
Sbjct: 53 KPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQ 112
Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 310
KKIDR Y LY++AKG FK+K L ++
Sbjct: 113 KKIDRRTYRMLYIRAKGGQFKSKHQLYMFL 142
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/91 (38%), Positives = 52/91 (57%)
Frame = +2
Query: 59 SRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 238
SR R RK E ++KGRH G GKR GTANARMPQK++W +I +
Sbjct: 59 SRGRCRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKE 118
Query: 239 LYHSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
+ Y +AKG++FK++ + + I ++ AD+
Sbjct: 119 DFRVFYKQAKGHLFKHRFHMKDCIIKRKADE 149
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 67.7 bits (158), Expect = 5e-11
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +2
Query: 59 SRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 238
S ARV+K E R+KGR G G RRG A AR P KE W + KIDR
Sbjct: 61 SSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRK 120
Query: 239 LYHSLYMKAKGNVFKNKRVLMEYI 310
+Y LY AKG F+++ L Y+
Sbjct: 121 VYRKLYRMAKGGAFRSRSHLFLYM 144
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 60.1 bits (139), Expect = 1e-08
Identities = 32/92 (34%), Positives = 43/92 (46%)
Frame = +2
Query: 44 PVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAK 223
P+ SR R R+ E ++KGR G G R+G AR K W K
Sbjct: 53 PIEGQSRKRARELHEKKKKGRRRGPGSRKGKRTARADPKRQWINKVRAQRKLLKELKEKK 112
Query: 224 KIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 319
ID Y LY K KGN+FK++ L+ Y+ +K
Sbjct: 113 IIDNKTYWDLYKKVKGNLFKSRSHLLLYLKQK 144
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 55.2 bits (127), Expect = 3e-07
Identities = 28/73 (38%), Positives = 35/73 (47%)
Frame = +2
Query: 92 RRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKG 271
RRKGR G G+R+G A AR+ KE W + IDR Y LYM AKG
Sbjct: 71 RRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKG 130
Query: 272 NVFKNKRVLMEYI 310
F++ L Y+
Sbjct: 131 GTFRDLASLKRYM 143
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/82 (32%), Positives = 36/82 (43%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
+P SR+R RK + KGR G G R+G+ANAR P+K W
Sbjct: 58 RPFVGTSRSRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRWMRTIRAQRKELKGMRED 117
Query: 221 KKIDRHLYHSLYMKAKGNVFKN 286
I Y Y KAKG +++
Sbjct: 118 DSISSSEYRYYYRKAKGGSYRS 139
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 51.2 bits (117), Expect = 4e-06
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -1
Query: 243 YRCLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAVPLLLPKPQ*RPFLRXSVFLRTRA 64
Y +++ L RS R L L +F GI+ALAVP L P PF R VF R RA
Sbjct: 96 YMAVNLLRFQLSLRSRH-RILILLIQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRA 154
Query: 63 RECT-ATGFXDDETILDHLTDV 1
RE T + DD+ I D L D+
Sbjct: 155 REWTDSHRLPDDQAIFDQLPDL 176
Score = 37.1 bits (82), Expect = 0.077
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -3
Query: 334 GLISXLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLL 221
GL+ VDVLHE+ L LE+I L ++ V+ M VNLL
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLL 102
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 51.2 bits (117), Expect = 4e-06
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +2
Query: 47 VAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 226
V++H +R R RRK RH G+GK A R+ K L KK
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWN-KK 55
Query: 227 IDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
ID+ +Y H ++MK KG V+KNK VLME +H+ ++
Sbjct: 56 IDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 51.2 bits (117), Expect = 4e-06
Identities = 28/83 (33%), Positives = 49/83 (59%)
Frame = -3
Query: 310 DVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFSKNPLSLYP*FLLWHTRIGCT 131
DVL E+ L+LEH+TL L +E ++ +P++L +V +Q +++ L+L P L HT + T
Sbjct: 89 DVLQENALILEHVTLSLSIEGLIKVPIDLFVVTVPAQQATEDTLALNPESLRRHTSLPGT 148
Query: 130 SSLTKATVTTLSTXFCVFADTSA 62
++LT V + +T+A
Sbjct: 149 AALTVTAVAAEALSCMARTNTTA 171
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 44.0 bits (99), Expect(2) = 2e-05
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +2
Query: 227 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKXADKA 334
ID HLY SLY+K KGNV K +KR+ E+I + AD A
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSA 145
Score = 24.6 bits (51), Expect(2) = 2e-05
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 83 TEXRRKGRHCGFGKRRGT 136
T RR+G H G KR+GT
Sbjct: 90 TLARRRGWHMGIRKRKGT 107
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 47.2 bits (107), Expect = 7e-05
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 215 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ ADK
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADK 96
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 47.2 bits (107), Expect = 7e-05
Identities = 27/85 (31%), Positives = 35/85 (41%)
Frame = +2
Query: 56 HSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDR 235
+S R++K E KGR G G RGT AR P+K W T KID+
Sbjct: 57 NSNYRLKKRIEQLAKGRRRGEGSVRGTKYARFPRKRRWISRIRALRRELRELKTNNKIDK 116
Query: 236 HLYHSLYMKAKGNVFKNKRVLMEYI 310
Y Y K F ++ L +I
Sbjct: 117 KTYRRYYRIIKSGSFVSRAQLRNHI 141
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 46.4 bits (105), Expect = 1e-04
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANAR-MPQKELWXXXXXXXXXXXXXXXT 217
KP +SR R R E R+ GR G G RRGT AR KE+W
Sbjct: 49 KPRKRNSRGRWRITHEKRKSGRRRGRGSRRGTRKARGAVGKEVWVPRIRRIRRFLNTLKH 108
Query: 218 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 310
ID+ + +LY AKG F++ L Y+
Sbjct: 109 RGVIDKATWRNLYRMAKGGYFESLAHLRTYM 139
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +2
Query: 74 RKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSL 253
RK + +G+ G R+G AR K++W K IDRH Y L
Sbjct: 67 RKKRSLKSEGKKSG--SRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYREL 124
Query: 254 YMKAKGNVFK 283
Y+K KG +K
Sbjct: 125 YLKTKGGNYK 134
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 39.5 bits (88), Expect = 0.015
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = +2
Query: 59 SRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 238
SR R R ++KGR G G R+G R ++E W K++
Sbjct: 56 SRGRWRVRHIKKKKGRRRGHGSRKGP---RTDEEEAWKEKVRAMRRFLNTLKRKGKLEPR 112
Query: 239 LYHSLYMKAKGNVFKNKRVLMEYIH 313
++ LY KGN F++ L YI+
Sbjct: 113 VWRQLYRMVKGNYFRDLDHLKTYIN 137
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 34.3 bits (75), Expect = 0.55
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +2
Query: 59 SRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 238
SR R + R K R G ++G AR+ +KE++ K++
Sbjct: 60 SRGRAQTKKAQRNK-RGTKQGSKQGRKGARVGKKEIYVAKVRSLRRLLKIAKDRKELTNP 118
Query: 239 LYHSLYMKAKGNVFKNK---RVLMEYIHRK 319
+ +LY K GN +NK R LME I K
Sbjct: 119 EFWALYKKVGGNTVRNKAHLRQLMEEIVAK 148
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 34.3 bits (75), Expect = 0.55
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +2
Query: 41 KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
KPV+ SR R + + K R G ++G AR+ +K+++
Sbjct: 54 KPVSGTSRGRAQHKRRQKAK-RGSKAGSKQGRMGARVGKKQVYVKKVRALRYLLAVFKDR 112
Query: 221 KKIDRHLYHSLYMKAKGNVFKNK 289
K I + +LY K GN +NK
Sbjct: 113 KDITNPEFWALYKKVGGNTVRNK 135
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 33.9 bits (74), Expect = 0.72
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 62 RARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH- 238
R ++RK ++ G G G+R+GT NAR K LW K+ +
Sbjct: 61 RKKLRK--AKKQSGLKRGIGRRKGTKNARKKYKILWIHKIRNQRKLLKMFRNKKQFLNYK 118
Query: 239 -LYHSLYM--KAKGNVFKNKRVLMEYI 310
L + ++ K KGN F + + L+E++
Sbjct: 119 ILLNKVFFFSKIKGNFFSSTKHLLEHM 145
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 255 T*RRRVMCSRTSVCSWSTSTGRXLIR 332
T +RR MCS+T SW+TST R R
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTR 26
>UniRef50_UPI00006A22DC Cluster: UPI00006A22DC related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A22DC UniRef100 entry -
Xenopus tropicalis
Length = 676
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 237 CLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAVPLLLPKP 112
CL + A+ Y+ S L++ CL TH G R L+V L + +P
Sbjct: 603 CLDQYTAISYYPSQLLKSECL-THKPDDGYRRLSVRLSVAQP 643
>UniRef50_A0CB14 Cluster: Chromosome undetermined scaffold_163,
whole genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_163,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1041
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLME 304
KK+ RHL L + +GN+ KN +++M+
Sbjct: 482 KKLSRHLQDELQYQLRGNILKNCKIVMK 509
>UniRef50_A0U307 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 591
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 71 VRKNTEXRRKGRHCGFGKRRGTANARMPQKE 163
VR + +R+ RH F +RRG A AR Q++
Sbjct: 29 VRLHPAIQRRARHAEFARRRGNAPARPQQRD 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,207,645
Number of Sequences: 1657284
Number of extensions: 5552289
Number of successful extensions: 11985
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 11744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11968
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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