Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N02
         (336 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63527-1|CAA45090.1|  196|Homo sapiens ribosomal protein L19 pro...   137   9e-33
S56985-1|AAB25672.1|  196|Homo sapiens ribosomal protein L19 pro...   137   9e-33
BX537435-1|CAD97677.1|  205|Homo sapiens hypothetical protein pr...   137   9e-33
BC095445-1|AAH95445.1|  196|Homo sapiens ribosomal protein L19 p...   137   9e-33
BC066315-1|AAH66315.1|  196|Homo sapiens ribosomal protein L19 p...   137   9e-33
BC062709-1|AAH62709.1|  196|Homo sapiens ribosomal protein L19 p...   137   9e-33
BC013016-1|AAH13016.1|  196|Homo sapiens ribosomal protein L19 p...   137   9e-33
BC000530-1|AAH00530.1|  196|Homo sapiens ribosomal protein L19 p...   137   9e-33
AY157980-1|AAN76335.1|  173|Homo sapiens ribosomal protein L19 p...   137   9e-33
AK223082-1|BAD96802.1|  196|Homo sapiens ribosomal protein L19 v...   137   9e-33
AF327295-1|AAK37510.1|   47|Homo sapiens T cell receptor beta ch...    29   4.7  
AK124891-1|BAC85982.1|  140|Homo sapiens protein ( Homo sapiens ...    28   8.2  

>X63527-1|CAA45090.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  137 bits (331), Expect = 9e-33
 Identities = 63/98 (64%), Positives = 71/98 (72%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSRAR RKNT  RRKGRH G GKR+GTANARMP+K  W                +
Sbjct: 53  KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
           KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+  ADKA
Sbjct: 113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 150


>S56985-1|AAB25672.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  137 bits (331), Expect = 9e-33
 Identities = 63/98 (64%), Positives = 71/98 (72%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSRAR RKNT  RRKGRH G GKR+GTANARMP+K  W                +
Sbjct: 53  KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
           KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+  ADKA
Sbjct: 113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 150


>BX537435-1|CAD97677.1|  205|Homo sapiens hypothetical protein
           protein.
          Length = 205

 Score =  137 bits (331), Expect = 9e-33
 Identities = 63/98 (64%), Positives = 71/98 (72%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSRAR RKNT  RRKGRH G GKR+GTANARMP+K  W                +
Sbjct: 62  KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 121

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
           KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+  ADKA
Sbjct: 122 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 159


>BC095445-1|AAH95445.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  137 bits (331), Expect = 9e-33
 Identities = 63/98 (64%), Positives = 71/98 (72%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSRAR RKNT  RRKGRH G GKR+GTANARMP+K  W                +
Sbjct: 53  KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
           KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+  ADKA
Sbjct: 113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 150


>BC066315-1|AAH66315.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  137 bits (331), Expect = 9e-33
 Identities = 63/98 (64%), Positives = 71/98 (72%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSRAR RKNT  RRKGRH G GKR+GTANARMP+K  W                +
Sbjct: 53  KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
           KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+  ADKA
Sbjct: 113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 150


>BC062709-1|AAH62709.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  137 bits (331), Expect = 9e-33
 Identities = 63/98 (64%), Positives = 71/98 (72%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSRAR RKNT  RRKGRH G GKR+GTANARMP+K  W                +
Sbjct: 53  KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
           KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+  ADKA
Sbjct: 113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 150


>BC013016-1|AAH13016.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  137 bits (331), Expect = 9e-33
 Identities = 63/98 (64%), Positives = 71/98 (72%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSRAR RKNT  RRKGRH G GKR+GTANARMP+K  W                +
Sbjct: 53  KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
           KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+  ADKA
Sbjct: 113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 150


>BC000530-1|AAH00530.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  137 bits (331), Expect = 9e-33
 Identities = 63/98 (64%), Positives = 71/98 (72%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSRAR RKNT  RRKGRH G GKR+GTANARMP+K  W                +
Sbjct: 53  KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
           KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+  ADKA
Sbjct: 113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 150


>AY157980-1|AAN76335.1|  173|Homo sapiens ribosomal protein L19
           protein.
          Length = 173

 Score =  137 bits (331), Expect = 9e-33
 Identities = 63/98 (64%), Positives = 71/98 (72%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSRAR RKNT  RRKGRH G GKR+GTANARMP+K  W                +
Sbjct: 34  KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 93

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
           KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+  ADKA
Sbjct: 94  KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 131


>AK223082-1|BAD96802.1|  196|Homo sapiens ribosomal protein L19
           variant protein.
          Length = 196

 Score =  137 bits (331), Expect = 9e-33
 Identities = 63/98 (64%), Positives = 71/98 (72%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSRAR RKNT  RRKGRH G GKR+GTANARMP+K  W                +
Sbjct: 53  KPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADKA 334
           KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+  ADKA
Sbjct: 113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 150


>AF327295-1|AAK37510.1|   47|Homo sapiens T cell receptor beta chain
           protein.
          Length = 47

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 127 SLTKATVTTLSTXFCVFADTSAGVYCYRF 41
           +L  AT +  S  FC  +D+  G+Y Y F
Sbjct: 5   TLESATSSQTSVYFCAISDSGTGIYGYTF 33


>AK124891-1|BAC85982.1|  140|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42901 fis, clone BRHIP3011241. ).
          Length = 140

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 165 SSFCGIRALAVPLLLPKPQ*RPFLRXSVFLRTRARECT 52
           S FCG+   + PL LP P   PF   + ++R R   C+
Sbjct: 102 SCFCGLSPSSRPLELPPPS-CPFFSKAPWVRIRGSVCS 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,848,883
Number of Sequences: 237096
Number of extensions: 945597
Number of successful extensions: 1538
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)