Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_N02
         (336 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p pro...   149   1e-36
AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p pro...   149   1e-36
AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB...   149   1e-36
AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA...   149   1e-36
X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal prot...   146   8e-36
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P...    32   0.21 

>BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p
           protein.
          Length = 208

 Score =  149 bits (360), Expect = 1e-36
 Identities = 69/97 (71%), Positives = 73/97 (75%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSR RVRKNTE RRKGRHCGFGKR+GTANARMP K LW                +
Sbjct: 58  KPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDS 117

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
           KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+K A+K
Sbjct: 118 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEK 154



 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +1

Query: 1  NIRKMIKDGLVIXK 42
          NIRK+IKDGL+I K
Sbjct: 45 NIRKLIKDGLIIKK 58


>AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p
           protein.
          Length = 221

 Score =  149 bits (360), Expect = 1e-36
 Identities = 69/97 (71%), Positives = 73/97 (75%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSR RVRKNTE RRKGRHCGFGKR+GTANARMP K LW                +
Sbjct: 71  KPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDS 130

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
           KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+K A+K
Sbjct: 131 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEK 167



 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +1

Query: 1  NIRKMIKDGLVIXK 42
          NIRK+IKDGL+I K
Sbjct: 58 NIRKLIKDGLIIKK 71


>AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB,
           isoform B protein.
          Length = 203

 Score =  149 bits (360), Expect = 1e-36
 Identities = 69/97 (71%), Positives = 73/97 (75%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSR RVRKNTE RRKGRHCGFGKR+GTANARMP K LW                +
Sbjct: 53  KPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDS 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
           KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+K A+K
Sbjct: 113 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEK 149



 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +1

Query: 1  NIRKMIKDGLVIXK 42
          NIRK+IKDGL+I K
Sbjct: 40 NIRKLIKDGLIIKK 53


>AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA,
           isoform A protein.
          Length = 203

 Score =  149 bits (360), Expect = 1e-36
 Identities = 69/97 (71%), Positives = 73/97 (75%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSR RVRKNTE RRKGRHCGFGKR+GTANARMP K LW                +
Sbjct: 53  KPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDS 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
           KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+K A+K
Sbjct: 113 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEK 149



 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +1

Query: 1  NIRKMIKDGLVIXK 42
          NIRK+IKDGL+I K
Sbjct: 40 NIRKLIKDGLIIKK 53


>X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal protein
           L19 protein.
          Length = 203

 Score =  146 bits (353), Expect = 8e-36
 Identities = 68/97 (70%), Positives = 72/97 (74%)
 Frame = +2

Query: 41  KPVAVHSRARVRKNTEXRRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 220
           KPV VHSR RVRKNTE RRK RHCGFGKR+GTANARMP K LW                +
Sbjct: 53  KPVVVHSRYRVRKNTEARRKDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDS 112

Query: 221 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKXADK 331
           KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+K A+K
Sbjct: 113 KKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEK 149



 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +1

Query: 1  NIRKMIKDGLVIXK 42
          NIRK+IKDGL+I K
Sbjct: 40 NIRKLIKDGLIIKK 53


>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
            protein.
          Length = 1718

 Score = 31.9 bits (69), Expect = 0.21
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -1

Query: 306  YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAV 133
            YS++   +L  L        +YR    FL   +++ NF  TLC C +S FCG  A  V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,996,281
Number of Sequences: 53049
Number of extensions: 272753
Number of successful extensions: 751
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)