Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_M24
(747 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 30 1.5
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 30 1.5
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 6.1
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.1
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 6.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 6.1
AC006696-2|ABQ13058.1| 129|Caenorhabditis elegans Hypothetical ... 28 6.1
AC006696-1|AAF39991.1| 151|Caenorhabditis elegans Hypothetical ... 28 6.1
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 183 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNV 362
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 363 QPASTQKPRSNSIS 404
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 183 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNV 362
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 363 QPASTQKPRSNSIS 404
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 183 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNV 362
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 363 QPASTQKPRSNSIS 404
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 6.1
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 126 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 296
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 657 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 712
Query: 297 QTPPQCALPAALLKNPSSVPNVQPAST 377
TP + P+S P QPA+T
Sbjct: 713 TTPSTITPTTRPVTQPASQPATQPATT 739
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 6.1
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 126 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 296
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 713 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 768
Query: 297 QTPPQCALPAALLKNPSSVPNVQPAST 377
TP + P+S P QPA+T
Sbjct: 769 TTPSTITPTTRPVTQPASQPATQPATT 795
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 6.1
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 126 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 296
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 536 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 591
Query: 297 QTPPQCALPAALLKNPSSVPNVQPAST 377
TP + P+S P QPA+T
Sbjct: 592 TTPSTITPTTRPVTQPASQPATQPATT 618
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 72 LTPRKFLIMSASPIARQATHSQSIPS-RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRI 248
LTP + I+S P +RQ+T + S+P+ + P+Q + S+ P I+ T +
Sbjct: 832 LTPSELPIISNLPASRQSTSAPSVPNVSNNSPSPPSQSIPIESTVP---IFGTPSSIPSM 888
Query: 249 VYERSFMLSLRQSPIS 296
RS S + P+S
Sbjct: 889 EPTRSTANSSKNHPVS 904
>AC006696-2|ABQ13058.1| 129|Caenorhabditis elegans Hypothetical
protein W08E12.8b protein.
Length = 129
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +3
Query: 150 RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAA 329
RRVL + + P + S + +STTP + + +LS S SQ PP LP
Sbjct: 11 RRVLDEEENECPPIESRGSSTSSFSTTPSSSASPLSINQLLS---SSFSQ-PPAPQLPVP 66
Query: 330 LLKNP 344
L NP
Sbjct: 67 LAFNP 71
>AC006696-1|AAF39991.1| 151|Caenorhabditis elegans Hypothetical
protein W08E12.8a protein.
Length = 151
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +3
Query: 150 RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAA 329
RRVL + + P + S + +STTP + + +LS S SQ PP LP
Sbjct: 33 RRVLDEEENECPPIESRGSSTSSFSTTPSSSASPLSINQLLS---SSFSQ-PPAPQLPVP 88
Query: 330 LLKNP 344
L NP
Sbjct: 89 LAFNP 93
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 273 SLRQSPISQTPPQCALPAALLK---NPSSVPNVQPASTQKPRSNSISFDESQETFSMD 437
SL S TP Q + L+ +PS +P+ PA KPR + +S S F D
Sbjct: 255 SLASSDAPATPDQNKSDNSSLRQTPSPSVLPSPVPAPMAKPRESVVSMANSTNPFDDD 312
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 78 PRKFLIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTP 206
PR I + +A+ + +R V + DP P YS TP
Sbjct: 424 PRSIYIETGKSTYGEASKTSGNNARSVYLADPVSAPKAYSVTP 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,457,907
Number of Sequences: 27780
Number of extensions: 382598
Number of successful extensions: 1031
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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