Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_M22
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ501251-1|ABF68612.1| 360|Homo sapiens cyclon protein. 89 7e-18
BC001378-1|AAH01378.1| 360|Homo sapiens coiled-coil domain cont... 89 7e-18
AK025974-1|BAB15304.1| 360|Homo sapiens protein ( Homo sapiens ... 89 7e-18
BC017874-1|AAH17874.1| 188|Homo sapiens Unknown (protein for IM... 31 2.0
AB040955-1|BAA96046.1| 1044|Homo sapiens KIAA1522 protein protein. 31 2.0
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein. 31 2.7
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 31 2.7
AF225988-1|AAF35390.1| 1980|Homo sapiens voltage-gated sodium ch... 31 2.7
BC125230-1|AAI25231.1| 1462|Homo sapiens CAMSAP1L1 protein protein. 30 4.6
BC125229-1|AAI25230.1| 1489|Homo sapiens CAMSAP1L1 protein protein. 30 4.6
BC056910-1|AAH56910.1| 678|Homo sapiens CAMSAP1L1 protein protein. 30 4.6
BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance ... 30 4.6
BC011385-1|AAH11385.1| 389|Homo sapiens CAMSAP1L1 protein protein. 30 4.6
AL450104-4|CAI17079.1| 124|Homo sapiens calmodulin regulated sp... 30 4.6
AL450104-2|CAI17077.1| 1489|Homo sapiens calmodulin regulated sp... 30 4.6
AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance ... 30 4.6
AJ005015-1|CAA06289.1| 391|Homo sapiens SMC-like protein protein. 30 4.6
AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated p... 30 4.6
AB029001-1|BAA83030.2| 1365|Homo sapiens KIAA1078 protein protein. 30 4.6
BC111001-1|AAI11002.1| 189|Homo sapiens STMN4 protein protein. 30 6.1
BC011520-1|AAH11520.1| 216|Homo sapiens stathmin-like 4 protein. 30 6.1
AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens ... 30 6.1
AJ303455-1|CAC22254.1| 189|Homo sapiens RB3 protein protein. 30 6.1
>DQ501251-1|ABF68612.1| 360|Homo sapiens cyclon protein.
Length = 360
Score = 89.4 bits (212), Expect = 7e-18
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 135 ANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSK-KEKFSTINKTKGLKQDFSKKTALRLEL 311
++ AP + K+E +G PKSGR WK + K++FS + + K L+ + +K R E
Sbjct: 218 SSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQER 277
Query: 312 KRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRKKQLR 491
K K+ ++ NLK+ EN +K+EVVQVI N KLKR +KKQLR
Sbjct: 278 KLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLR 337
Query: 492 FIEKRDT 512
IEKRDT
Sbjct: 338 SIEKRDT 344
>BC001378-1|AAH01378.1| 360|Homo sapiens coiled-coil domain
containing 86 protein.
Length = 360
Score = 89.4 bits (212), Expect = 7e-18
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 135 ANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSK-KEKFSTINKTKGLKQDFSKKTALRLEL 311
++ AP + K+E +G PKSGR WK + K++FS + + K L+ + +K R E
Sbjct: 218 SSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQER 277
Query: 312 KRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRKKQLR 491
K K+ ++ NLK+ EN +K+EVVQVI N KLKR +KKQLR
Sbjct: 278 KLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLR 337
Query: 492 FIEKRDT 512
IEKRDT
Sbjct: 338 SIEKRDT 344
>AK025974-1|BAB15304.1| 360|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22321 fis, clone HRC05390. ).
Length = 360
Score = 89.4 bits (212), Expect = 7e-18
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 135 ANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSK-KEKFSTINKTKGLKQDFSKKTALRLEL 311
++ AP + K+E +G PKSGR WK + K++FS + + K L+ + +K R E
Sbjct: 218 SSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQER 277
Query: 312 KRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRKKQLR 491
K K+ ++ NLK+ EN +K+EVVQVI N KLKR +KKQLR
Sbjct: 278 KLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLR 337
Query: 492 FIEKRDT 512
IEKRDT
Sbjct: 338 SIEKRDT 344
>BC017874-1|AAH17874.1| 188|Homo sapiens Unknown (protein for
IMAGE:4697504) protein.
Length = 188
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/128 (22%), Positives = 56/128 (43%)
Frame = +3
Query: 102 KSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQDF 281
K +K++E ++ + S K++Q K K + KSGR+ S S + + +D
Sbjct: 71 KELEKHREKLLSGSES--SSKKRQRKKKEKK---KSGRY-SSSSSSSSDSSSSSSDSEDE 124
Query: 282 SKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVITNTTK 461
KK KR K+ ++ +LKK ++++ +E + I +K
Sbjct: 125 DKKQG-----KRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSK 179
Query: 462 LKRMRKKQ 485
K+ +KK+
Sbjct: 180 KKKKKKKK 187
>AB040955-1|BAA96046.1| 1044|Homo sapiens KIAA1522 protein protein.
Length = 1044
Score = 31.5 bits (68), Expect = 2.0
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 123 EVTIANNAPVLSEKRKQEKGKTIR---GIPKSGRFWKSKKEKFSTINKTKGLKQDFSKKT 293
E + A +A + + Q KG T R PKSG+ + ++E+ ST+ GL Q K+
Sbjct: 127 ESSTAEDALSIRSEMIQRKGSTFRPHDSFPKSGKSGRRRRERRSTV---LGLPQHVQKEL 183
Query: 294 ALRLE 308
LR E
Sbjct: 184 GLRNE 188
>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
Length = 1411
Score = 31.1 bits (67), Expect = 2.7
Identities = 33/162 (20%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Frame = +3
Query: 30 KILTKIVMADETQAKVSSIVTDITKSRDKYKEVTIA-NNAPVLSEKRKQEKGKTIRGIPK 206
+I T + + + + +++T+++ +DK +V+ + N+ EK Q+ I + K
Sbjct: 833 RIQTTVTELQKVKMEKEALMTELSTVKDKLSKVSDSLKNSKSEFEKENQKGKAAILDLEK 892
Query: 207 SGRFWKS--KKEKFSTINKTKGLKQDFSKKT----ALRLELKRTKE--ISKQAXXXXXXX 362
+ + K + + +T+ + K LK+ K+ L+LEL +E I Q
Sbjct: 893 TCKELKHQLQVQMENTLKEQKELKKSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEK 952
Query: 363 XXXXXXXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRKKQL 488
LK++ E +KK ++ + K+ ++K +L
Sbjct: 953 EEQQLQGNINELKQSSEQKKKQ--IEALQGELKIAVLQKTEL 992
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 31.1 bits (67), Expect = 2.7
Identities = 33/162 (20%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Frame = +3
Query: 30 KILTKIVMADETQAKVSSIVTDITKSRDKYKEVTIA-NNAPVLSEKRKQEKGKTIRGIPK 206
+I T + + + + +++T+++ +DK +V+ + N+ EK Q+ I + K
Sbjct: 833 RIQTTVTELQKVKMEKEALMTELSTVKDKLSKVSDSLKNSKSEFEKENQKGKAAILDLEK 892
Query: 207 SGRFWKS--KKEKFSTINKTKGLKQDFSKKT----ALRLELKRTKE--ISKQAXXXXXXX 362
+ + K + + +T+ + K LK+ K+ L+LEL +E I Q
Sbjct: 893 TCKELKHQLQVQMENTLKEQKELKKSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEK 952
Query: 363 XXXXXXXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRKKQL 488
LK++ E +KK ++ + K+ ++K +L
Sbjct: 953 EEQQLQGNINELKQSSEQKKKQ--IEALQGELKIAVLQKTEL 992
>AF225988-1|AAF35390.1| 1980|Homo sapiens voltage-gated sodium
channel alpha subunit protein.
Length = 1980
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/52 (25%), Positives = 32/52 (61%)
Frame = +3
Query: 54 ADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKS 209
A++ +A+ +++ + K +++ + +AN+A +SE +E+G+ G P+S
Sbjct: 425 AEQKEAEFKAMLEQLKKQQEEAQAAAMANSAGTVSEDAIEEEGEEGGGSPRS 476
>BC125230-1|AAI25231.1| 1462|Homo sapiens CAMSAP1L1 protein protein.
Length = 1462
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +3
Query: 270 KQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVIT 449
+ D + K A LE + +E K+ +K EE R+K E +
Sbjct: 1145 ENDMAMKRAALLEKRLRRE--KETQLRKQQLEAEMEHKKEETRRKTEEERQKKEDERARR 1202
Query: 450 NTTKLKRMRKKQLRFIEKRDT 512
+ + MR+KQL+ +E DT
Sbjct: 1203 EFIRQEYMRRKQLKLMEDMDT 1223
>BC125229-1|AAI25230.1| 1489|Homo sapiens CAMSAP1L1 protein protein.
Length = 1489
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +3
Query: 270 KQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVIT 449
+ D + K A LE + +E K+ +K EE R+K E +
Sbjct: 1172 ENDMAMKRAALLEKRLRRE--KETQLRKQQLEAEMEHKKEETRRKTEEERQKKEDERARR 1229
Query: 450 NTTKLKRMRKKQLRFIEKRDT 512
+ + MR+KQL+ +E DT
Sbjct: 1230 EFIRQEYMRRKQLKLMEDMDT 1250
>BC056910-1|AAH56910.1| 678|Homo sapiens CAMSAP1L1 protein protein.
Length = 678
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +3
Query: 270 KQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVIT 449
+ D + K A LE + +E K+ +K EE R+K E +
Sbjct: 587 ENDMAMKRAALLEKRLRRE--KETQLRKQQLEAEMEHKKEETRRKTEEERQKKEDERARR 644
Query: 450 NTTKLKRMRKKQLRFIEKRDT 512
+ + MR+KQL+ +E DT
Sbjct: 645 EFIRQEYMRRKQLKLMEDMDT 665
>BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 30.3 bits (65), Expect = 4.6
Identities = 33/135 (24%), Positives = 56/135 (41%)
Frame = +3
Query: 120 KEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQDFSKKTAL 299
KE+ N + K+K+E K IR + G + EK+ T++ LKQ F K
Sbjct: 920 KELEKMTNRQGMLLKKKEECMKKIREL---GSLPQEAFEKYQTLS----LKQLFRKLEQC 972
Query: 300 RLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRK 479
ELK+ ++K+A +K+ EE + + + + N +L++
Sbjct: 973 NTELKKYSHVNKKALDQFVNFSEQKEKL----IKRQEELDRGYKSIMELMNVLELRKYEA 1028
Query: 480 KQLRFIEKRDTNKEV 524
QL F + EV
Sbjct: 1029 IQLTFKQVSKNFSEV 1043
>BC011385-1|AAH11385.1| 389|Homo sapiens CAMSAP1L1 protein protein.
Length = 389
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +3
Query: 270 KQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVIT 449
+ D + K A LE + +E K+ +K EE R+K E +
Sbjct: 72 ENDMAMKRAALLEKRLRRE--KETQLRKQQLEAEMEHKKEETRRKTEEERQKKEDERARR 129
Query: 450 NTTKLKRMRKKQLRFIEKRDT 512
+ + MR+KQL+ +E DT
Sbjct: 130 EFIRQEYMRRKQLKLMEDMDT 150
>AL450104-4|CAI17079.1| 124|Homo sapiens calmodulin regulated
spectrin-associated protein 1-like 1 protein.
Length = 124
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +3
Query: 270 KQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVIT 449
+ D + K A LE + +E K+ +K EE R+K E +
Sbjct: 37 ENDMAMKRAALLEKRLRRE--KETQLRKQQLEAEMEHKKEETRRKTEEERQKKEDERARR 94
Query: 450 NTTKLKRMRKKQLRFIEKRDT 512
+ + MR+KQL+ +E DT
Sbjct: 95 EFIRQEYMRRKQLKLMEDMDT 115
>AL450104-2|CAI17077.1| 1489|Homo sapiens calmodulin regulated
spectrin-associated protein 1-like 1 protein.
Length = 1489
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +3
Query: 270 KQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVIT 449
+ D + K A LE + +E K+ +K EE R+K E +
Sbjct: 1172 ENDMAMKRAALLEKRLRRE--KETQLRKQQLEAEMEHKKEETRRKTEEERQKKEDERARR 1229
Query: 450 NTTKLKRMRKKQLRFIEKRDT 512
+ + MR+KQL+ +E DT
Sbjct: 1230 EFIRQEYMRRKQLKLMEDMDT 1250
>AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 30.3 bits (65), Expect = 4.6
Identities = 33/135 (24%), Positives = 56/135 (41%)
Frame = +3
Query: 120 KEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQDFSKKTAL 299
KE+ N + K+K+E K IR + G + EK+ T++ LKQ F K
Sbjct: 920 KELEKMTNRQGMLLKKKEECMKKIREL---GSLPQEAFEKYQTLS----LKQLFRKLEQC 972
Query: 300 RLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRK 479
ELK+ ++K+A +K+ EE + + + + N +L++
Sbjct: 973 NTELKKYSHVNKKALDQFVNFSEQKEKL----IKRQEELDRGYKSIMELMNVLELRKYEA 1028
Query: 480 KQLRFIEKRDTNKEV 524
QL F + EV
Sbjct: 1029 IQLTFKQVSKNFSEV 1043
>AJ005015-1|CAA06289.1| 391|Homo sapiens SMC-like protein protein.
Length = 391
Score = 30.3 bits (65), Expect = 4.6
Identities = 33/135 (24%), Positives = 56/135 (41%)
Frame = +3
Query: 120 KEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQDFSKKTAL 299
KE+ N + K+K+E K IR + G + EK+ T++ LKQ F K
Sbjct: 94 KELEKMTNRQGMLLKKKEECMKKIREL---GSLPQEAFEKYQTLS----LKQLFRKLEQC 146
Query: 300 RLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRK 479
ELK+ ++K+A +K+ EE + + + + N +L++
Sbjct: 147 NTELKKYSHVNKKALDQFVNFSEQKEKL----IKRQEELDRGYKSIMELMNVLELRKYEA 202
Query: 480 KQLRFIEKRDTNKEV 524
QL F + EV
Sbjct: 203 IQLTFKQVSKNFSEV 217
>AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated
polypeptide protein.
Length = 1217
Score = 30.3 bits (65), Expect = 4.6
Identities = 33/135 (24%), Positives = 56/135 (41%)
Frame = +3
Query: 120 KEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQDFSKKTAL 299
KE+ N + K+K+E K IR + G + EK+ T++ LKQ F K
Sbjct: 920 KELEKMTNRQGMLLKKKEECMKKIREL---GSLPQEAFEKYQTLS----LKQLFRKLEQC 972
Query: 300 RLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRK 479
ELK+ ++K+A +K+ EE + + + + N +L++
Sbjct: 973 NTELKKYSHVNKKALDQFVNFSEQKEKL----IKRQEELDRGYKSIMELMNVLELRKYEA 1028
Query: 480 KQLRFIEKRDTNKEV 524
QL F + EV
Sbjct: 1029 IQLTFKQVSKNFSEV 1043
>AB029001-1|BAA83030.2| 1365|Homo sapiens KIAA1078 protein protein.
Length = 1365
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +3
Query: 270 KQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVIT 449
+ D + K A LE + +E K+ +K EE R+K E +
Sbjct: 1048 ENDMAMKRAALLEKRLRRE--KETQLRKQQLEAEMEHKKEETRRKTEEERQKKEDERARR 1105
Query: 450 NTTKLKRMRKKQLRFIEKRDT 512
+ + MR+KQL+ +E DT
Sbjct: 1106 EFIRQEYMRRKQLKLMEDMDT 1126
>BC111001-1|AAI11002.1| 189|Homo sapiens STMN4 protein protein.
Length = 189
Score = 29.9 bits (64), Expect = 6.1
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +3
Query: 93 DITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLK 272
+ + R KY+E + + L+EKR+ E+ + I ++ F K KEK + K + K
Sbjct: 99 EAAEERRKYQEAELLKH---LAEKREHEREVIQKAIEENNNFIKMAKEKLA--QKMESNK 153
Query: 273 QDFSKKTALRLELKRTKEISKQA 341
+ +++ L L+R +E K A
Sbjct: 154 E--NREAHLAAMLERLQEKDKHA 174
>BC011520-1|AAH11520.1| 216|Homo sapiens stathmin-like 4 protein.
Length = 216
Score = 29.9 bits (64), Expect = 6.1
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +3
Query: 93 DITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLK 272
+ + R KY+E + + L+EKR+ E+ + I ++ F K KEK + K + K
Sbjct: 126 EAAEERRKYQEAELLKH---LAEKREHEREVIQKAIEENNNFIKMAKEKLA--QKMESNK 180
Query: 273 QDFSKKTALRLELKRTKEISKQA 341
+ +++ L L+R +E K A
Sbjct: 181 E--NREAHLAAMLERLQEKDKHA 201
>AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46115 fis, clone TESTI2037085. ).
Length = 148
Score = 29.9 bits (64), Expect = 6.1
Identities = 22/95 (23%), Positives = 40/95 (42%)
Frame = +3
Query: 222 KSKKEKFSTINKTKGLKQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLK 401
K KK+K K K K+ KK + + K+ K+ K+ K
Sbjct: 2 KKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 61
Query: 402 KAEENRKKSEVVQVITNTTKLKRMRKKQLRFIEKR 506
K ++N+KK + + K K+ +KK+ + ++R
Sbjct: 62 KKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRR 96
Score = 29.9 bits (64), Expect = 6.1
Identities = 23/95 (24%), Positives = 39/95 (41%)
Frame = +3
Query: 222 KSKKEKFSTINKTKGLKQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLK 401
K KK+K K K K+ KK + + K+ K+ K+ N K
Sbjct: 9 KKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKK 68
Query: 402 KAEENRKKSEVVQVITNTTKLKRMRKKQLRFIEKR 506
K ++ +KK + + K K+ RK++ R +R
Sbjct: 69 KKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRR 103
>AJ303455-1|CAC22254.1| 189|Homo sapiens RB3 protein protein.
Length = 189
Score = 29.9 bits (64), Expect = 6.1
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +3
Query: 93 DITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLK 272
+ + R KY+E + + L+EKR+ E+ + I ++ F K KEK + K + K
Sbjct: 99 EAAEERRKYQEAELLKH---LAEKREHEREVIQKAIEENNNFIKMAKEKLA--QKMESNK 153
Query: 273 QDFSKKTALRLELKRTKEISKQA 341
+ +++ L L+R +E K A
Sbjct: 154 E--NREAHLAAMLERLQEKDKHA 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,060,333
Number of Sequences: 237096
Number of extensions: 1000407
Number of successful extensions: 3117
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3058
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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