Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_M22
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical ... 67 7e-12
U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z83233-1|CAB05760.3| 371|Caenorhabditis elegans Hypothetical pr... 31 0.72
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.72
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.72
AF273797-1|AAG15145.1| 323|Caenorhabditis elegans nuclear recep... 31 0.72
Z81044-8|CAI79147.2| 165|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 29 1.7
AM085500-1|CAJ30198.1| 947|Caenorhabditis elegans autophagy pro... 29 2.2
AF101315-4|AAO25988.1| 719|Caenorhabditis elegans Hypothetical ... 29 2.2
AF077529-1|AAC26253.1| 690|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 28 3.9
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 28 3.9
AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia t... 28 3.9
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 28 5.1
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 28 5.1
U53140-1|AAA96101.1| 276|Caenorhabditis elegans Hypothetical pr... 28 5.1
U49795-1|AAB03859.1| 673|Caenorhabditis elegans DNA-binding pro... 28 5.1
U49794-1|AAB03858.1| 673|Caenorhabditis elegans lag-1 protein. 28 5.1
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 28 5.1
AF100663-8|AAM98006.1| 671|Caenorhabditis elegans Lin-12 and gl... 28 5.1
AF100663-7|AAC68978.3| 673|Caenorhabditis elegans Lin-12 and gl... 28 5.1
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 27 6.7
Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical pr... 27 8.9
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 27 8.9
AL023856-8|CAA19565.2| 326|Caenorhabditis elegans Hypothetical ... 27 8.9
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 27 8.9
>AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical
protein Y40B1B.7 protein.
Length = 123
Score = 67.3 bits (157), Expect = 7e-12
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = +3
Query: 204 KSGRFWKSKKEK-FSTINKTKGLKQDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXX 380
KS R+WK+K+EK S I K K LK + KK L+ + K +
Sbjct: 15 KSNRWWKTKQEKKHSEIKKVKTLKSTWDKKMELKAKKDMVKRVQDNIREKQVQERQEKKE 74
Query: 381 XXXXNLKKAEENRKKSEVVQVITNTTKLKRMRKKQLRFIEKRDTNK 518
K+ EN +K+E+VQ IT KLK+ +K+QLR I+ RDT +
Sbjct: 75 RKVEQEKRRLENERKAEIVQKITKIHKLKKTKKRQLRSIQMRDTTQ 120
>U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical
protein C03F11.4 protein.
Length = 389
Score = 37.1 bits (82), Expect = 0.008
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 69 AKVSSIV-TDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFS 245
A SS+ TDI+ D+ ++ N+ + S + K+++GKT + K+ R K +E+
Sbjct: 61 ATTSSVADTDISNICDQLLVLSTTNHKSMGSTRGKKKRGKTAKKAKKANRAQKITEEEIE 120
Query: 246 TINKTKGLKQDFSKKTALRLELKRTKE 326
I K K K D K LR E + ++
Sbjct: 121 AIKKKK--KLDADKAYELRQEQMKIRQ 145
>Z83233-1|CAB05760.3| 371|Caenorhabditis elegans Hypothetical
protein K06B4.1 protein.
Length = 371
Score = 30.7 bits (66), Expect = 0.72
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -2
Query: 247 VENFSFLDFQNLPDFGIPLIVFPFSCFLFSLRTGALFAIVTSLYLSRDFVISVTIEDTF 71
+ +FS +F N F ++F F+C LRTG + +L RD +++ + ED +
Sbjct: 152 ISHFSNFEFMNNISFADRKLIFSFNC----LRTGVFHGSMRTLREQRDCLLTPSGEDVY 206
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 0.72
Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Frame = +3
Query: 54 ADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKK 233
AD++ K S V D+ K K + A N ++ E + E IR + + ++ +
Sbjct: 11042 ADQSAEKTSLEVRDMKKKMKKKQVSGTAEN--LIGESNRDETSMEIRDL-NTQHSNQTGE 11098
Query: 234 EKFSTINKTKGLKQDFS---KKTALRLELKRTKEIS--KQAXXXXXXXXXXXXXXXXXNL 398
++ ST N + ++ +S K + +L + +EI K NL
Sbjct: 11099 DESSTFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNL 11158
Query: 399 KKAEENRKKSEVVQVITNTTKLKRMRKKQLRFIEKRDTNKEVESSK 536
KK EEN K + + +++ + + LR K+ EVE S+
Sbjct: 11159 KKGEENEKTKFEAKHLGSSSASDSLAESTLR--SKKTKKGEVEKSE 11202
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 0.72
Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Frame = +3
Query: 54 ADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKK 233
AD++ K S V D+ K K + A N ++ E + E IR + + ++ +
Sbjct: 11042 ADQSAEKTSLEVRDMKKKMKKKQVSGTAEN--LIGESNRDETSMEIRDL-NTQHSNQTGE 11098
Query: 234 EKFSTINKTKGLKQDFS---KKTALRLELKRTKEIS--KQAXXXXXXXXXXXXXXXXXNL 398
++ ST N + ++ +S K + +L + +EI K NL
Sbjct: 11099 DESSTFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNL 11158
Query: 399 KKAEENRKKSEVVQVITNTTKLKRMRKKQLRFIEKRDTNKEVESSK 536
KK EEN K + + +++ + + LR K+ EVE S+
Sbjct: 11159 KKGEENEKTKFEAKHLGSSSASDSLAESTLR--SKKTKKGEVEKSE 11202
>AF273797-1|AAG15145.1| 323|Caenorhabditis elegans nuclear receptor
NHR-51 protein.
Length = 323
Score = 30.7 bits (66), Expect = 0.72
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -2
Query: 247 VENFSFLDFQNLPDFGIPLIVFPFSCFLFSLRTGALFAIVTSLYLSRDFVISVTIEDTF 71
+ +FS +F N F ++F F+C LRTG + +L RD +++ + ED +
Sbjct: 104 ISHFSNFEFMNNISFADRKLIFSFNC----LRTGVFHGSMRTLREQRDCLLTPSGEDVY 158
>Z81044-8|CAI79147.2| 165|Caenorhabditis elegans Hypothetical
protein C30H6.12 protein.
Length = 165
Score = 30.3 bits (65), Expect = 0.95
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 144 APVLSEKRKQEKGKTIRGIPKSG--RFWKSKKEKFSTINKTKGLKQDFSKKTALRLELKR 317
+PVLS++R E+ + + +SG + S+K+K +T TK ++ KK A + ++
Sbjct: 47 SPVLSDRRSSEEKEKKKSKSRSGSKKRSSSQKKKTTTTTTTKTSQKTAKKKEAKDVTKEK 106
Query: 318 TKEISK 335
+E S+
Sbjct: 107 DRESSE 112
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 159 EKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQDFSKKTALRLELKRTKEISKQ 338
EKR++EK K + + R + +KE+ K K +++ K+ E +R KE KQ
Sbjct: 194 EKRREEKKKQKELLKEKERSERKEKERELEREKEKSREKEREKEREKEREKEREKEREKQ 253
>AM085500-1|CAJ30198.1| 947|Caenorhabditis elegans autophagy
protein 9 protein.
Length = 947
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 21 NYTKILTKIVMADETQAKVSSIVTDITKSRDKYKEVTI 134
N+ K L IV E Q + S+VT + ++RD E++I
Sbjct: 624 NHIKELKAIVEDQEDQQQAQSVVTSLNRARDGKTELSI 661
>AF101315-4|AAO25988.1| 719|Caenorhabditis elegans Hypothetical
protein T22H9.2b protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 21 NYTKILTKIVMADETQAKVSSIVTDITKSRDKYKEVTI 134
N+ K L IV E Q + S+VT + ++RD E++I
Sbjct: 624 NHIKELKAIVEDQEDQQQAQSVVTSLNRARDGKTELSI 661
>AF077529-1|AAC26253.1| 690|Caenorhabditis elegans Hypothetical
protein C09E8.3 protein.
Length = 690
Score = 28.7 bits (61), Expect = 2.9
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = -2
Query: 301 LNAVFLEKSCLRP--FVLLMVENFSFLDFQNLPDFGIPLIVFPFSCFLFSLRTGALFAIV 128
L+ + L L P F L++ F+ P G PLI+ PF L ALFA+V
Sbjct: 604 LSPLVLSPLILSPQVFTPLILSPFALNPLILTPMVGSPLILSPFVLSPIILSPQALFAVV 663
Query: 127 TSLYLSRDFVISVTI 83
S Y V S I
Sbjct: 664 LSPYALSPLVESKLI 678
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 135 ANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQD 278
A PV E K++ GKT RG PK K K+ I +G K++
Sbjct: 1309 ATETPVAEESPKKKSGKTTRGRPK-----KVKENLKKRIQPRRGQKEE 1351
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 135 ANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQD 278
A PV E K++ GKT RG PK K K+ I +G K++
Sbjct: 1309 ATETPVAEESPKKKSGKTTRGRPK-----KVKENLKKRIQPRRGQKEE 1351
>AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia
telangectasia mutated)family protein 1 protein.
Length = 649
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 69 AKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEK--F 242
+K+ IV I ++ Y+E+ + + + +R + GKT+ P + +K K +
Sbjct: 232 SKLKEIVITIREAHQAYREIAMLDVRGNVRIQRVEINGKTMYRWPHDLKIFKCKLRQLPI 291
Query: 243 STINKTKGLKQDFSKKTALRLELKRTKEI 329
TI++ G D+S T + KR K++
Sbjct: 292 PTISQKIGCPGDYS--TTDLITWKRWKDV 318
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 162 KRKQEKGKTIRGIPKSGRFWK 224
KRKQE K + GI S +FWK
Sbjct: 583 KRKQEIMKVLVGIHNSSKFWK 603
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical protein
ZC373.4 protein.
Length = 1211
Score = 27.9 bits (59), Expect = 5.1
Identities = 35/168 (20%), Positives = 70/168 (41%), Gaps = 7/168 (4%)
Frame = +3
Query: 39 TKIVMADETQA----KVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPK 206
TKIVM E QA + ++ V TKS +K E T A+ V S ++K + ++
Sbjct: 849 TKIVMTSEKQATTTVQTTTSVKRTTKSSEKKVEHT-ADGKSVESSQKKNSQKDDVKVSQV 907
Query: 207 SGRFWKSKKEKFSTINKTKGLKQDFSKKTALRLELKRTKEISKQ---AXXXXXXXXXXXX 377
+ + + + T+ K + + ++K+ E K T+ ++
Sbjct: 908 TTKKEEDSTQPAPTLTVKKNVVKQTAEKSTSEKEHKTTENKEQERIIKKSSTLKDKDVAQ 967
Query: 378 XXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRKKQLRFIEKRDTNKE 521
++K E K+S+V+ T KL+ ++ + K+ + K+
Sbjct: 968 VSLQQSIKVNGEKHKESKVIGTKTVINKLELKGEETINANPKKSSLKK 1015
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +3
Query: 57 DETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKE 236
DE ++V T +R KEV P K +G+ RGI K + K ++E
Sbjct: 87 DEPVPNKYAVVELATNARQTEKEVKKEEPEPEPKVDEKNTRGRKKRGIVKEKKEIKKEEE 146
Query: 237 KFSTINK 257
+N+
Sbjct: 147 PVEEVNE 153
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 27.9 bits (59), Expect = 5.1
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = +3
Query: 93 DITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGI-----PKSGRFWKSKKEKFSTINK 257
D + D+Y+ + E+R++E+ K IR + K R K KKE+ + +K
Sbjct: 244 DKERGEDRYERREMEKQNKAERERRRKEEAKRIRKLVDIAYAKDPRIIKFKKEQQAKKDK 303
Query: 258 TKGLKQDF--SKKTALRLELKRTKE 326
K KQ K+ A+ E KR KE
Sbjct: 304 AKEDKQRAIREKQEAIDRE-KREKE 327
>U53140-1|AAA96101.1| 276|Caenorhabditis elegans Hypothetical
protein ZC266.2 protein.
Length = 276
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 57 DETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQ 173
D + K SS I+KSR EVTI++++ KR+Q
Sbjct: 135 DSSLKKFSSANVTISKSRTSNGEVTISSSSSYSRSKRRQ 173
>U49795-1|AAB03859.1| 673|Caenorhabditis elegans DNA-binding
protein LAG-1 protein.
Length = 673
Score = 27.9 bits (59), Expect = 5.1
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 48 VMADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRG--IPKSGRFW 221
++ D Q+ S + D +++KY+ V +A V + EK I G+ W
Sbjct: 190 LIGDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGW 249
Query: 222 KSKKEKFSTINKTKGLKQDFSKKTAL 299
K KK++ + + KT LK K A+
Sbjct: 250 KLKKDRVAQLYKT--LKASAQKDAAI 273
>U49794-1|AAB03858.1| 673|Caenorhabditis elegans lag-1 protein.
Length = 673
Score = 27.9 bits (59), Expect = 5.1
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 48 VMADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRG--IPKSGRFW 221
++ D Q+ S + D +++KY+ V +A V + EK I G+ W
Sbjct: 190 LIGDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGW 249
Query: 222 KSKKEKFSTINKTKGLKQDFSKKTAL 299
K KK++ + + KT LK K A+
Sbjct: 250 KLKKDRVAQLYKT--LKASAQKDAAI 273
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +3
Query: 57 DETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKE 236
DE ++V T +R KEV P K +G+ RGI K + K ++E
Sbjct: 87 DEPVPNKYAVVELATNARQTEKEVKKEEPEPEPKVDEKNTRGRKKRGIVKEKKEIKKEEE 146
Query: 237 KFSTINK 257
+N+
Sbjct: 147 PVEEVNE 153
>AF100663-8|AAM98006.1| 671|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein1, isoform b protein.
Length = 671
Score = 27.9 bits (59), Expect = 5.1
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 48 VMADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRG--IPKSGRFW 221
++ D Q+ S + D +++KY+ V +A V + EK I G+ W
Sbjct: 188 LIGDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGW 247
Query: 222 KSKKEKFSTINKTKGLKQDFSKKTAL 299
K KK++ + + KT LK K A+
Sbjct: 248 KLKKDRVAQLYKT--LKASAQKDAAI 271
>AF100663-7|AAC68978.3| 673|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein1, isoform a protein.
Length = 673
Score = 27.9 bits (59), Expect = 5.1
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 48 VMADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRG--IPKSGRFW 221
++ D Q+ S + D +++KY+ V +A V + EK I G+ W
Sbjct: 190 LIGDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGW 249
Query: 222 KSKKEKFSTINKTKGLKQDFSKKTAL 299
K KK++ + + KT LK K A+
Sbjct: 250 KLKKDRVAQLYKT--LKASAQKDAAI 273
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 27.5 bits (58), Expect = 6.7
Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Frame = +3
Query: 105 SRDKYKE--VTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQD 278
SRD + + +++ +P ++ K PK+ + + ++EK + KQ
Sbjct: 48 SRDSSNQSVIELSDTSPQKETSQQSPKAPKTPKTPKTPKVSREEREKQKREKMEEREKQR 107
Query: 279 FSKKTAL---RLE---LKRTKEISKQAXXXXXXXXXXXXXXXXXNLKK-AEENRKKSEVV 437
++ L RLE L K + K+ +K AEE +KK E
Sbjct: 108 IERERILEEKRLEKDKLAEEKRLDKEKKEKERLDKKLEEDKKKEEKRKEAEEKKKKDEEE 167
Query: 438 QVITNTTKLKRMRKKQLRFIEKRDTNKEVESSK 536
++ + + KR ++++ + KR ++E + +K
Sbjct: 168 KMKKDEERNKRKKEEEEKKEAKRREDEEKKEAK 200
>Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical
protein Y26G10.2 protein.
Length = 337
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -2
Query: 340 ACLDISLVRFSSNLNAVFLEKSCLRPFVLLMVENFSFLDFQNLPDFGIPL 191
+CL + R S LN K+C+R F L++ F FL F N+ +G +
Sbjct: 114 SCLLLFCNRILSILNMYRKSKTCIRRFFELILYIFVFL-FPNIMFYGFQI 162
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 27.1 bits (57), Expect = 8.9
Identities = 34/150 (22%), Positives = 57/150 (38%), Gaps = 2/150 (1%)
Frame = +3
Query: 93 DITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLK 272
D K +K K + +K++ EK + K + + KKE K + K
Sbjct: 132 DDKKEENKEKSKDEEKKKDEVKDKKEDEKMDDKKPGEKEEKKEEFKKE-MKKEEKKEEKK 190
Query: 273 QDFSKKTALRLELKRTKEISKQAXXXXXXXXXXXXXXXXXNLKKAEE-NRKKSEVVQVIT 449
++ K A + E + E+ K A KK ++ + KK E +
Sbjct: 191 EEPKKNDAPKKEGETKGEVKKDALVENPIVTEMSDRDEKKEEKKDDKKDEKKDEKKEAKK 250
Query: 450 NTTKL-KRMRKKQLRFIEKRDTNKEVESSK 536
K K+ KK+ + EK+D KE + K
Sbjct: 251 EEKKEEKKEEKKEEKKEEKKDDKKEDDKEK 280
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.1 bits (57), Expect = 8.9
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Frame = +3
Query: 18 TNYTKILTKIVMADETQAKVSSIVTDITKSRDKYKEVTIANNAPVLSEKRKQEKGKTIRG 197
++YT L K+ A++T AK+ + K + + +EV EK K+E K
Sbjct: 690 SDYTDCLNKVRKAEDTLAKIEN------KYKKESEEVKKTGKNKDKVEKTKEEVEKAKEE 743
Query: 198 IPKSGRFWKSKKEKFSTINK--TKGLKQDFS-KKTALRLELKRTKE 326
K ++ + EK + K K + DF +R LK +E
Sbjct: 744 FQKVKEEFQKEVEKVKKVEKELEKAKESDFKVYLDDVRRSLKNVRE 789
>AL023856-8|CAA19565.2| 326|Caenorhabditis elegans Hypothetical
protein Y94A7B.3 protein.
Length = 326
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 238 FSFLDFQNLPDFGIPLIVFPFSCF 167
FSF F L DF + V PF CF
Sbjct: 50 FSFHFFSALMDFSVSFFVQPFVCF 73
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 27.1 bits (57), Expect = 8.9
Identities = 25/123 (20%), Positives = 51/123 (41%)
Frame = +3
Query: 159 EKRKQEKGKTIRGIPKSGRFWKSKKEKFSTINKTKGLKQDFSKKTALRLELKRTKEISKQ 338
E +K+EK + + K KK++ K++ K+D +K + K K+ K+
Sbjct: 98 EDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDD---DKKEDKKDDKK 154
Query: 339 AXXXXXXXXXXXXXXXXXNLKKAEENRKKSEVVQVITNTTKLKRMRKKQLRFIEKRDTNK 518
+ +K EE +++ + + + K KK+ + EK++ K
Sbjct: 155 SDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKEDEK 214
Query: 519 EVE 527
+VE
Sbjct: 215 KVE 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,958,241
Number of Sequences: 27780
Number of extensions: 167768
Number of successful extensions: 820
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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