Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_M21
         (370 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83218-7|CAB05685.2|  283|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z49127-9|CAA88948.1|  340|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AL132860-10|CAB60525.1|  615|Caenorhabditis elegans Hypothetical...    27   5.5  
AL132860-9|CAB60524.1|  647|Caenorhabditis elegans Hypothetical ...    27   5.5  
AF291846-1|AAK55963.1|  340|Caenorhabditis elegans heterotrimeri...    27   5.5  
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p...    26   9.7  
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical...    26   9.7  

>Z83218-7|CAB05685.2|  283|Caenorhabditis elegans Hypothetical
           protein C31A11.3 protein.
          Length = 283

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 235 INTFHDCINIQYSPYECYTT 176
           I T  DC+N+Q S  +CY T
Sbjct: 151 IETPKDCVNLQCSTNQCYIT 170


>Z49127-9|CAA88948.1|  340|Caenorhabditis elegans Hypothetical
           protein F13D12.7 protein.
          Length = 340

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 176 YSSHESTVDITAVLPSGEAFNLIWDCSTNSSFEI 75
           +  HES ++  A  PSG AF    D +T   F+I
Sbjct: 222 FPGHESDINAVAFFPSGNAFATGSDDATCRLFDI 255


>AL132860-10|CAB60525.1|  615|Caenorhabditis elegans Hypothetical
           protein Y56A3A.12b protein.
          Length = 615

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +2

Query: 185 AFIWAVLNVDTIMECIYLVLERLYNSNKCL 274
           AF+W  ++V++ + CI  V+   +N+ + L
Sbjct: 83  AFVWRAIDVNSEINCITEVIREAFNTAEAL 112


>AL132860-9|CAB60524.1|  647|Caenorhabditis elegans Hypothetical
           protein Y56A3A.12a protein.
          Length = 647

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +2

Query: 185 AFIWAVLNVDTIMECIYLVLERLYNSNKCL 274
           AF+W  ++V++ + CI  V+   +N+ + L
Sbjct: 115 AFVWRAIDVNSEINCITEVIREAFNTAEAL 144


>AF291846-1|AAK55963.1|  340|Caenorhabditis elegans heterotrimeric G
           protein beta subunit1 protein.
          Length = 340

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 176 YSSHESTVDITAVLPSGEAFNLIWDCSTNSSFEI 75
           +  HES ++  A  PSG AF    D +T   F+I
Sbjct: 222 FPGHESDINAVAFFPSGNAFATGSDDATCRLFDI 255


>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
           protein H38K22.1 protein.
          Length = 1570

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 119 FNLIWDCSTNSSFEISHTSSYVN*F 45
           FN + DC TN+S E+S  + +   F
Sbjct: 31  FNCLHDCKTNNSEEVSSPNRFARLF 55


>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
           protein H38K22.1 protein.
          Length = 1570

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 119 FNLIWDCSTNSSFEISHTSSYVN*F 45
           FN + DC TN+S E+S  + +   F
Sbjct: 31  FNCLHDCKTNNSEEVSSPNRFARLF 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,797,388
Number of Sequences: 27780
Number of extensions: 96829
Number of successful extensions: 207
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)