Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_M20
(455 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0607 + 4464669-4465367,4466212-4467369,4468005-4469114,446... 43 1e-04
02_02_0327 - 8983983-8985878 31 0.44
07_03_0921 + 22606287-22606490,22607139-22607210,22607433-226075... 30 0.77
04_04_1133 - 31132835-31132942,31133046-31133115,31133201-311333... 30 0.77
07_03_1095 + 23926977-23927657 29 2.3
10_08_0584 + 18971761-18971834,18971852-18973133,18973197-189745... 28 3.1
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 28 3.1
07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206 28 3.1
06_03_0267 + 18970578-18972464 28 3.1
06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776 28 3.1
05_03_0294 + 11818391-11820268,11820332-11820550,11820752-118216... 28 3.1
04_04_1405 - 33305948-33309676,33309749-33310468,33310533-333114... 28 3.1
04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376 28 3.1
04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220 28 3.1
03_02_0383 + 7966929-7968951,7969085-7969104 28 3.1
02_03_0347 - 17999780-18000592,18000656-18003019 28 3.1
02_03_0116 - 15440263-15441024,15441097-15443451 28 3.1
01_06_0717 - 31446860-31447074,31447183-31447270,31448909-314490... 28 3.1
06_03_1324 + 29322459-29322515,29322720-29322819,29323049-293232... 28 4.1
04_04_0210 + 23616407-23618851 28 4.1
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 28 4.1
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 28 4.1
10_08_0944 + 21735483-21735848,21737025-21737276 27 5.4
07_03_0618 + 19998470-19998970,19999079-19999517,19999617-199998... 27 7.2
03_01_0235 - 1842909-1843498,1844380-1844569 27 7.2
02_03_0397 + 18574277-18574618,18574740-18574848,18574854-18575872 27 7.2
01_05_0546 - 23119897-23120109 27 7.2
08_02_0063 - 11842013-11842327,11842333-11842608,11842622-11842642 27 9.5
08_01_0178 - 1509100-1511214 27 9.5
07_03_0616 + 19988392-19988734,19988755-19988891,19989021-199892... 27 9.5
04_04_0579 - 26355431-26355684,26355988-26356073,26356292-263563... 27 9.5
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 27 9.5
>03_01_0607 + 4464669-4465367,4466212-4467369,4468005-4469114,
4469273-4469314,4469496-4469572,4469671-4469755,
4469818-4469901,4469988-4470089,4470181-4470279,
4470794-4470919
Length = 1193
Score = 43.2 bits (97), Expect = 1e-04
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 10/135 (7%)
Frame = +2
Query: 50 SSSGFMFYSVPHRGSPLADI--KTPITARSIELL-EISQNSRSTLSLQSRWMSAVRSGSA 220
+++G +FYS PH GS LAD+ + + R + E+ S + L G
Sbjct: 1053 NTNGLVFYSCPHFGSRLADMPWRMGLVFRPAPSIGELRSGSPRLVELNDFVRQRHSKGLL 1112
Query: 221 TVCSLVETRRTLMS------VLWLRIVSLQSADAGVGS-VEGAGVDHRQVCKPSSRRCPL 379
V S ET+ T + L + IV ++SA G G V A DH CKP ++ P
Sbjct: 1113 NVLSFSETQVTPIVEGYGGWALRMEIVPIESAYPGYGELVVLASTDHINSCKPVNKNDPS 1172
Query: 380 YTRLTALIHTATRNK 424
Y A + +++
Sbjct: 1173 YADTLAFLEKILKSR 1187
>02_02_0327 - 8983983-8985878
Length = 631
Score = 31.1 bits (67), Expect = 0.44
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 42 CGPAALGSC-FIRCHTEGRRWPTSRPQ*QPGASNSWRSAKTAGLPCRCSPAGCQR 203
CG A GS F + H G+R + P + GA S K G RCS GC +
Sbjct: 374 CGKGAQGSTNFCKAHGGGKR--CTHPDCKKGAEGSTAFCKGHGGGKRCSAEGCTK 426
>07_03_0921 +
22606287-22606490,22607139-22607210,22607433-22607522,
22607694-22607736,22608151-22608257,22608848-22608943,
22609543-22609733,22609819-22609888,22609992-22610099
Length = 326
Score = 30.3 bits (65), Expect = 0.77
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 143 LEISQNSRSTLSLQSRWMSAVRSGSATVCSLVE--TRRTLMSVLWLRIVSLQSADAGVGS 316
L +S NSR+ +LQ+ ++ G+ C + TRR WL+ + L AG+G+
Sbjct: 261 LRLSDNSRACAALQTCLPDMLKDGTFNNCLRDDPTTRR------WLQQLLLNVTGAGMGA 314
Query: 317 VEGAGVDH 340
G+DH
Sbjct: 315 APQPGLDH 322
>04_04_1133 -
31132835-31132942,31133046-31133115,31133201-31133391,
31133991-31134086,31134676-31134782,31135197-31135239,
31135411-31135500,31135723-31135794,31136443-31136646
Length = 326
Score = 30.3 bits (65), Expect = 0.77
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 143 LEISQNSRSTLSLQSRWMSAVRSGSATVCSLVE--TRRTLMSVLWLRIVSLQSADAGVGS 316
L +S NSR+ +LQ+ ++ G+ C + TRR WL+ + L AG+G+
Sbjct: 261 LRLSDNSRACAALQTCLPDMLKDGTFNNCLRDDPTTRR------WLQQLLLNVTGAGMGA 314
Query: 317 VEGAGVDH 340
G+DH
Sbjct: 315 APQPGLDH 322
>07_03_1095 + 23926977-23927657
Length = 226
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 209 SGSATVCSLVETRRTLMSVLWLRI-VSLQSADA-GVGSVEGAGVDHRQVCKPSSR 367
SGS + S E S+L L + ++ D G+G V+G GVD ++ KPS R
Sbjct: 41 SGSVAIGSDSEEEYLATSLLMLAHGIRDETKDIRGMGDVKGVGVDTLELVKPSQR 95
>10_08_0584 +
18971761-18971834,18971852-18973133,18973197-18974509,
18993885-18993935,18994674-18994829,18995048-18995123,
18995317-18995364,18995445-18995489,18995580-18995679,
18995923-18995968,18996115-18996176,18996257-18996355,
18996536-18996609,18996721-18996790,18997074-18997162,
18997327-18997404
Length = 1220
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D+ G R+ HRL +PG P VR AP RQ I
Sbjct: 471 PADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFI 510
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D+ G R+ HRL +PG P VR AP RQ I
Sbjct: 679 PADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPGRQAFI 718
>07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206
Length = 961
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D+ G R+ HRL +PG P VR AP RQ I
Sbjct: 672 PADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFI 711
>06_03_0267 + 18970578-18972464
Length = 628
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 42 CGPAALGSC-FIRCHTEGRRWPTSRPQ*QPGASNSWRSAKTAGLPCRCSPAGCQR 203
C A GS F + H G+R + P GA S K G RCS GC +
Sbjct: 379 CTKGAQGSTNFCKAHGGGKR--CTHPNCSKGAEGSTALCKAHGGGKRCSAEGCPK 431
>06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776
Length = 833
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D+ G R+ HRL +PG P VR AP RQ I
Sbjct: 542 PADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFI 581
>05_03_0294 +
11818391-11820268,11820332-11820550,11820752-11821644,
11829889-11829905,11829927-11830183
Length = 1087
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D+ G R+ HRL +PG P VR AP RQ I
Sbjct: 645 PADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFI 684
>04_04_1405 -
33305948-33309676,33309749-33310468,33310533-33311439,
33334405-33334484
Length = 1811
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D+ G R+ HRL +PG P VR AP RQ I
Sbjct: 588 PADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFI 627
>04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376
Length = 1135
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D+ G R+ HRL +PG P VR AP RQ I
Sbjct: 436 PADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFI 475
>04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220
Length = 1053
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D++G R+ HRL +PG P VR AP RQ I
Sbjct: 790 PADMTGVPREVIEHRLAVRPGARPVRQKVRWQAPERQAFI 829
>03_02_0383 + 7966929-7968951,7969085-7969104
Length = 680
Score = 28.3 bits (60), Expect = 3.1
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 197 SAVRSGSATVCSLVETRRTLMSVLWLRIVSLQSADAGVGSVE----GAGVDHRQVCKPSS 364
SAV +G A V +LV L +WLR + A AG G+ G GV R P+
Sbjct: 39 SAVGAGVAAVVALVLVALGLGLFVWLRRGRKRGAGAGGGAAARMGVGVGVGARTQPAPAL 98
Query: 365 RR 370
RR
Sbjct: 99 RR 100
>02_03_0347 - 17999780-18000592,18000656-18003019
Length = 1058
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D+ G R+ HRL +PG P VR AP RQ I
Sbjct: 807 PADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFI 846
>02_03_0116 - 15440263-15441024,15441097-15443451
Length = 1038
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D+ G R+ HRL +PG P VR AP RQ I
Sbjct: 804 PADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFI 843
>01_06_0717 -
31446860-31447074,31447183-31447270,31448909-31449012,
31449618-31449745,31450461-31450555,31461823-31463115,
31463188-31464039,31464568-31464621
Length = 942
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 187 PLDVSGAQRQ--RHRL--QPGGNPADPHVRALAPNRQLTI 294
P D+ G R+ HRL +PG P VR AP RQ I
Sbjct: 321 PADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFI 360
>06_03_1324 +
29322459-29322515,29322720-29322819,29323049-29323266,
29323767-29324305,29324396-29325125
Length = 547
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 371 TGGWMACRPADG 336
TGGWMACRP G
Sbjct: 42 TGGWMACRPILG 53
>04_04_0210 + 23616407-23618851
Length = 814
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 197 SAVRSGSATVCSLVETRRTLMSV--LW-LRIVSLQSADAGVGSVEGAGVD 337
++VR G V ++ TR + LW LRI L++ D G+V GAG D
Sbjct: 200 ASVRGGGDGVAAVQSTRSKVYVTPKLWYLRISVLEAQDVVPGAVAGAGGD 249
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -2
Query: 136 DAPGCYWGLDV---GQRRPSVWHRIKHEPRAAGPQAGT 32
D+P C+ GL G R+ +W R RA GP T
Sbjct: 80 DSPNCFCGLIPAANGVRKSGLWQRTNEIIRALGPNPST 117
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 267 STDMRVRRVSTRLQTVALPLRTADIQRDCSDKVDRLFW--LISRSSMLLAVI 118
S D++V+++ L+ ++PL+ D ++ +RLF+ LI LL V+
Sbjct: 135 SQDLQVKKIMHNLRQYSVPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVV 186
>10_08_0944 + 21735483-21735848,21737025-21737276
Length = 205
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 175 QGRPAVLADLQEFDAPGCYWGLDVG-QRRPSV 83
+ RPA + +F A GC+WG+++ QR P V
Sbjct: 31 EDRPAAGNEFAQFGA-GCFWGVELAFQRVPGV 61
>07_03_0618 +
19998470-19998970,19999079-19999517,19999617-19999804,
19999944-20000264
Length = 482
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 362 WMACRPADGPRRHPPQTPLLRLPI 291
W C +G R+ P TP+L LPI
Sbjct: 446 WKLCCKEEGYRKDPLPTPVLGLPI 469
>03_01_0235 - 1842909-1843498,1844380-1844569
Length = 259
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 285 AYNRQTQEWGLWRVPAWTIGRSASHPAAGVRSTPDSP 395
A +Q QE WR GRS H GV P +P
Sbjct: 141 AVRQQQQERRRWRTKGSQEGRSRRHGHGGVGDEPTAP 177
>02_03_0397 + 18574277-18574618,18574740-18574848,18574854-18575872
Length = 489
Score = 27.1 bits (57), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 267 FGSESSAYNRQTQEWGLW 320
FG+E +N+Q WG W
Sbjct: 192 FGNEQQQHNQQNPNWGAW 209
>01_05_0546 - 23119897-23120109
Length = 70
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 56 SGFMFYSVPHRGSPLADIKTPITARSIELLEISQ 157
SG M S+ GSP A T TAR I++ + Q
Sbjct: 19 SGLMQLSMAQAGSPAAATATATTARVIDVKAVDQ 52
>08_02_0063 - 11842013-11842327,11842333-11842608,11842622-11842642
Length = 203
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +1
Query: 58 WVHVLFGATPRVAAGRHQDPNNSQEHRTPGDQPKQPVYLV 177
WV + PR G+ P Q RT PK P+Y +
Sbjct: 19 WVKLSLELPPRTPPGQEPSPAAYQFSRTICRIPKDPIYKI 58
>08_01_0178 - 1509100-1511214
Length = 704
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +3
Query: 78 CHTEGRRWPT--SRPQ*QPGASNSWRSAKTAGLPCRCSP-AGCQRC 206
C RW S P QP ++ +T G P R P + C +C
Sbjct: 42 CPACNARWTNAPSNPPPQPAGGSTTPFGQTTGFPMRVRPWSSCDKC 87
>07_03_0616 +
19988392-19988734,19988755-19988891,19989021-19989231,
19989372-19989455,19989540-19989727,19989873-19990193
Length = 427
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 362 WMACRPADGPRRHPPQTPLLRLPI 291
W C +G R+ P PLL LPI
Sbjct: 391 WKLCCKEEGYRKDPTPMPLLGLPI 414
>04_04_0579 -
26355431-26355684,26355988-26356073,26356292-26356377,
26356596-26356788,26356895-26357094,26359257-26359379
Length = 313
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 12 FWMSYQHVPACGPAALGSCFIRCHT 86
FW HVPA L +CF+ H+
Sbjct: 200 FWYPIGHVPAMNKKDLTTCFLTYHS 224
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 23 LSARAGLWTSSSGFMFYSVPHRGS 94
L A AGLWTS +G + Y V RGS
Sbjct: 1424 LRALAGLWTSGTGDIIYHV--RGS 1445
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,986,277
Number of Sequences: 37544
Number of extensions: 338747
Number of successful extensions: 1312
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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