Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_M20
(455 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69794-5|CAA93682.1| 506|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z69789-6|CAA93652.1| 506|Caenorhabditis elegans Hypothetical pr... 36 0.011
U21323-13|AAA62547.2| 284|Caenorhabditis elegans Hypothetical p... 28 3.7
L14745-4|AAA27921.1| 419|Caenorhabditis elegans Hypothetical pr... 28 3.7
L14745-3|AAM15539.1| 450|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily a... 28 3.7
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 27 4.9
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 27 4.9
Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 27 8.6
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 27 8.6
AF005246-1|AAB95119.1| 556|Caenorhabditis elegans voltage-depen... 27 8.6
>Z69794-5|CAA93682.1| 506|Caenorhabditis elegans Hypothetical
protein F17H10.1 protein.
Length = 506
Score = 36.3 bits (80), Expect = 0.011
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +2
Query: 41 LWTSSSGFMFYSVPHRGSPLADIKTPITARSIELLEISQNSRSTLSLQSRWMSAVRSGSA 220
L ++ G +F + PH+GSP+A+ + + ++ +++N+ L + SAV
Sbjct: 374 LLKNTVGVLFIATPHKGSPVANWGYSVFQPTEDVRMLNENNAINRKLNEDF-SAVSKEIP 432
Query: 221 TVCSLVET-RRTLMSVLWLRIVSLQSADAGVGSVEGAGVDHRQVCKPS 361
+ S+VET +++ +V +SA G+V H +CKP+
Sbjct: 433 VIVSMVETVESNIIANAKSIVVPNKSAVFEQGAVYHIADVHLNLCKPT 480
>Z69789-6|CAA93652.1| 506|Caenorhabditis elegans Hypothetical
protein F17H10.1 protein.
Length = 506
Score = 36.3 bits (80), Expect = 0.011
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +2
Query: 41 LWTSSSGFMFYSVPHRGSPLADIKTPITARSIELLEISQNSRSTLSLQSRWMSAVRSGSA 220
L ++ G +F + PH+GSP+A+ + + ++ +++N+ L + SAV
Sbjct: 374 LLKNTVGVLFIATPHKGSPVANWGYSVFQPTEDVRMLNENNAINRKLNEDF-SAVSKEIP 432
Query: 221 TVCSLVET-RRTLMSVLWLRIVSLQSADAGVGSVEGAGVDHRQVCKPS 361
+ S+VET +++ +V +SA G+V H +CKP+
Sbjct: 433 VIVSMVETVESNIIANAKSIVVPNKSAVFEQGAVYHIADVHLNLCKPT 480
>U21323-13|AAA62547.2| 284|Caenorhabditis elegans Hypothetical
protein C45G9.2 protein.
Length = 284
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 391 ESGVERTPAAGWLADLPMVHAGTLHRPHSCV 299
++GV+ AA L D P + AG H P CV
Sbjct: 198 QTGVDGIMAANGLLDNPALFAGHEHTPSDCV 228
>L14745-4|AAA27921.1| 419|Caenorhabditis elegans Hypothetical
protein C02F5.6a protein.
Length = 419
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +1
Query: 106 HQDPNNSQEHRTPGDQPKQPVYLVAAVPLDVSGAQRQRHRLQP 234
HQDPN+ + + ++ + +Y +A D +++++ QP
Sbjct: 51 HQDPNDRKNKKNNDEEWRDSIYNIATDESDTDDHEQRKNFFQP 93
>L14745-3|AAM15539.1| 450|Caenorhabditis elegans Hypothetical
protein C02F5.6b protein.
Length = 450
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +1
Query: 106 HQDPNNSQEHRTPGDQPKQPVYLVAAVPLDVSGAQRQRHRLQP 234
HQDPN+ + + ++ + +Y +A D +++++ QP
Sbjct: 51 HQDPNDRKNKKNNDEEWRDSIYNIATDESDTDDHEQRKNFFQP 93
>AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily
assigned gene nameprotein 40 protein.
Length = 714
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 171 VDRLFWLISRSSMLLAVIGVLMSASGD 91
VDR+ W++S SM+ V+ + +SGD
Sbjct: 539 VDRIMWVLSLGSMVFVVLVIQDYSSGD 565
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 64 HVLFGATPRVAAGRHQDPNNSQEHRTPGDQPKQPVYLVAA 183
HV+FG ++ G Q + PGD+PKQ V + A+
Sbjct: 151 HVVFG---KILEGMDVVRKIEQTEKLPGDRPKQDVIIAAS 187
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 64 HVLFGATPRVAAGRHQDPNNSQEHRTPGDQPKQPVYLVAA 183
HV+FG ++ G Q + PGD+PKQ V + A+
Sbjct: 151 HVVFG---KILEGMDVVRKIEQTEKLPGDRPKQDVIIAAS 187
>Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical
protein Y41E3.18 protein.
Length = 510
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 130 PGCYWGLDVGQRRPSVWHRIKH 65
P CY D R WHR+KH
Sbjct: 134 PRCYRITDAFDRFKGTWHRVKH 155
>Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 26.6 bits (56), Expect = 8.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 121 YWGLDVGQRRPSVWHRIKH 65
YWGLD P W ++ H
Sbjct: 118 YWGLDASDTEPCCWMQLLH 136
>Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 26.6 bits (56), Expect = 8.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 121 YWGLDVGQRRPSVWHRIKH 65
YWGLD P W ++ H
Sbjct: 118 YWGLDASDTEPCCWMQLLH 136
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +2
Query: 62 FMFYSVPHRGSPLADIKTPITARSIELLEISQNSRSTLSLQSRWMSAVRSGSATVCSLVE 241
F F S P + + D+ P+T+ + S N+RS ++ + ++ +RS + C ++
Sbjct: 4 FGFLSAPLKSTNEVDLVKPLTSYIDNVYNTSDNNRSDVAEAVQELNKLRSKAC--CQPLD 61
Query: 242 TRRTLMSVL 268
++ + VL
Sbjct: 62 KHQSALDVL 70
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical
protein R10E12.1c protein.
Length = 846
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +2
Query: 62 FMFYSVPHRGSPLADIKTPITARSIELLEISQNSRSTLSLQSRWMSAVRSGSATVCSLVE 241
F F S P + + D+ P+T+ + S N+RS ++ + ++ +RS + C ++
Sbjct: 4 FGFLSAPLKSTNEVDLVKPLTSYIDNVYNTSDNNRSDVAEAVQELNKLRSKAC--CQPLD 61
Query: 242 TRRTLMSVL 268
++ + VL
Sbjct: 62 KHQSALDVL 70
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +2
Query: 62 FMFYSVPHRGSPLADIKTPITARSIELLEISQNSRSTLSLQSRWMSAVRSGSATVCSLVE 241
F F S P + + D+ P+T+ + S N+RS ++ + ++ +RS + C ++
Sbjct: 4 FGFLSAPLKSTNEVDLVKPLTSYIDNVYNTSDNNRSDVAEAVQELNKLRSKAC--CQPLD 61
Query: 242 TRRTLMSVL 268
++ + VL
Sbjct: 62 KHQSALDVL 70
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +2
Query: 62 FMFYSVPHRGSPLADIKTPITARSIELLEISQNSRSTLSLQSRWMSAVRSGSATVCSLVE 241
F F S P + + D+ P+T+ + S N+RS ++ + ++ +RS + C ++
Sbjct: 4 FGFLSAPLKSTNEVDLVKPLTSYIDNVYNTSDNNRSDVAEAVQELNKLRSKAC--CQPLD 61
Query: 242 TRRTLMSVL 268
++ + VL
Sbjct: 62 KHQSALDVL 70
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = +2
Query: 62 FMFYSVPHRGSPLADIKTPITARSIELLEISQNSRSTLSLQSRWMSAVRSGSATVCSLVE 241
F F S P + + D+ P+T+ + S N+RS ++ + ++ +RS + C ++
Sbjct: 4 FGFLSAPLKSTNEVDLVKPLTSYIDNVYNTSDNNRSDVAEAVQELNKLRSKAC--CQPLD 61
Query: 242 TRRTLMSVL 268
++ + VL
Sbjct: 62 KHQSALDVL 70
>AF005246-1|AAB95119.1| 556|Caenorhabditis elegans
voltage-dependent potassium channelalpha subunit
protein.
Length = 556
Score = 26.6 bits (56), Expect = 8.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 121 YWGLDVGQRRPSVWHRIKH 65
YWGLD P W ++ H
Sbjct: 116 YWGLDASDTEPCCWMQLLH 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,581,760
Number of Sequences: 27780
Number of extensions: 248945
Number of successful extensions: 705
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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