Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_M17
(813 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1919.09 |tif6||translation initiation factor eIF6|Schizosacc... 31 0.15
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.79
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 28 1.8
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 27 3.2
SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subuni... 27 4.2
SPBC1773.08c |||mannosyltransferase complex subunit |Schizosacch... 26 5.5
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 22 6.6
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 26 7.3
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 25 9.7
SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 25 9.7
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 25 9.7
>SPCC1919.09 |tif6||translation initiation factor
eIF6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 577 VSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTGGQTVINPWCTIGGVATT 729
V + + +E+D + L+ + G+ V G V+N WC G+ TT
Sbjct: 161 VHPRTSIQEQDELSSLLQVPLVAGTINRGSDVIGAGLVVNDWCAFAGLDTT 211
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.1 bits (62), Expect = 0.79
Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 2/133 (1%)
Frame = -2
Query: 782 TSPIXALSGTMYSLGWQIVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITT 609
TSP S T + ++ ++ PI ++ P+T V S + I+ T
Sbjct: 373 TSPTAVNSSTPITSS-SVLNSSTPITSSSILNTSTPITSSSVLNSSTPITSSSILNSSTP 431
Query: 608 SRSFSVIFVETPNNMSILSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSP 429
S +V+ TP S ++ TPI S+ + I +S+ S V +P
Sbjct: 432 ITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 491
Query: 428 PCLSGVTEQSKPM 390
S V S P+
Sbjct: 492 ITSSTVVNSSTPI 504
Score = 29.1 bits (62), Expect = 0.79
Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ PI ++ P+T V S + ++ T S SV+ TP S
Sbjct: 749 VLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSST 808
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI S+ + I +++ S V +P S V S P+
Sbjct: 809 VLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSSTPI 864
Score = 29.1 bits (62), Expect = 0.79
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V ++ PI + P+T V S + I+ T S SV+ TP S
Sbjct: 3149 VVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTPITSST 3208
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
++ TPI S+ + AI +S+ S V +P S V S P+
Sbjct: 3209 TLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI 3264
Score = 28.7 bits (61), Expect = 1.0
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 2/141 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V + PI ++ P+T V S + ++ T S SV+ TP S
Sbjct: 1181 VVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSS 1240
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPMPMRG 378
+ +S TPI S+ + I +S+ S P S V S P+
Sbjct: 1241 ILNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSSTPITS-- 1298
Query: 377 IATCINWS*SACE*SCCKDST 315
+T +N S S S ST
Sbjct: 1299 -STALNTSTSITSSSVLNSST 1318
Score = 28.7 bits (61), Expect = 1.0
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V ++ PI ++ P+T A + + ++ T S SV+ TP S
Sbjct: 1949 VVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTSTPITSSS 2008
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + I +S+ S +P S V S P+
Sbjct: 2009 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 2064
Score = 28.7 bits (61), Expect = 1.0
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V ++ PI ++ P+T A + + ++ T S +V+ TP S
Sbjct: 2453 VVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSST 2512
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + I +S+ S V +P S V S P+
Sbjct: 2513 VVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI 2568
Score = 28.3 bits (60), Expect = 1.4
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ PI + PP+T V S + ++ T S +V+ TP S
Sbjct: 1637 VLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 1696
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
++ TPI S+ + I +++ S V +P S V S P+
Sbjct: 1697 ALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPI 1752
Score = 28.3 bits (60), Expect = 1.4
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V ++ PI ++ P+T A + + ++ T S +V+ TP S
Sbjct: 2141 VVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSST 2200
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ ++ TPI ++ + I +S+ S V +P S V S P+
Sbjct: 2201 VVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPI 2256
Score = 27.5 bits (58), Expect = 2.4
Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 2/141 (1%)
Frame = -2
Query: 713 PIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSILSHSVT 540
PI ++ P+T A + + ++ T S +V+ TP S + +S T
Sbjct: 515 PITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSST 574
Query: 539 PIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPMPMRGIATCIN 360
PI ++ + I +S+ S V +P S V S P+ +T +N
Sbjct: 575 PITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITS---STALN 631
Query: 359 WS*SACE*SCCKDSTSFPRTS 297
S S ST +S
Sbjct: 632 TSTPITSSSVLNSSTPITSSS 652
Score = 27.5 bits (58), Expect = 2.4
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V ++ PI ++ P+T V + + ++ T S +V+ TP S
Sbjct: 1349 VVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSS 1408
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + I +S+ S V +P S V S P+
Sbjct: 1409 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSSTPI 1464
Score = 27.5 bits (58), Expect = 2.4
Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 2/135 (1%)
Frame = -2
Query: 713 PIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSILSHSVT 540
PI ++ P+T A + + ++ T S +V+ TP S + +S T
Sbjct: 2855 PITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSST 2914
Query: 539 PIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPMPMRGIATCIN 360
PI ++ + I +S+ S +P S V S P+ +T +N
Sbjct: 2915 PITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS---STALN 2971
Query: 359 WS*SACE*SCCKDST 315
S S S ST
Sbjct: 2972 TSTSITSSSVLNSST 2986
Score = 27.5 bits (58), Expect = 2.4
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSI 558
IV ++ PI ++ P+T + + ++ T S SV+ TP S
Sbjct: 3185 IVNSSTPITSSSVLNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSS 3244
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + I +S+ S V +P S V S P+
Sbjct: 3245 VLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI 3300
Score = 27.1 bits (57), Expect = 3.2
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ PI ++ P+T V S + ++ T S +V+ TP S
Sbjct: 1145 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSST 1204
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + I +S+ S + +P S V S P+
Sbjct: 1205 VVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPI 1260
Score = 27.1 bits (57), Expect = 3.2
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ PI ++ P+T V + + ++ T S +V+ TP S
Sbjct: 1397 VLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSS 1456
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + I +S+ S V +P S V S P+
Sbjct: 1457 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPI 1512
Score = 27.1 bits (57), Expect = 3.2
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V ++ PI ++ P+T V + + ++ T S +V+ TP S
Sbjct: 2189 VVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSS 2248
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + I +S+ S V +P S V S P+
Sbjct: 2249 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPI 2304
Score = 27.1 bits (57), Expect = 3.2
Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ PI ++ P+T A + + ++ T S +V+ TP S
Sbjct: 2345 VLNSSTPITSSTVVNTSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSS 2404
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + +I +S+ S V +P S V S P+
Sbjct: 2405 VLNSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPI 2460
Score = 27.1 bits (57), Expect = 3.2
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V + PI ++ P+T V + + ++ T S SV+ TP S
Sbjct: 2393 VVNTSTPITSSSVLNSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSST 2452
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI S+ + I +++ S V +P S V S P+
Sbjct: 2453 VVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPI 2508
Score = 27.1 bits (57), Expect = 3.2
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 3/117 (2%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V + PI ++ P+T V + + ++ T S + + TP S
Sbjct: 2897 VVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSS 2956
Query: 557 LSHSVTPI-AYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI + +L T + SST +VV T +P S V S P+
Sbjct: 2957 VLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPI 3012
Score = 26.6 bits (56), Expect = 4.2
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V + PI + P+T V S + ++ T S +V+ TP S
Sbjct: 1121 VVNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 1180
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPMPMRG 378
+ ++ TPI ++ + I +S+ S V +P S V S P+
Sbjct: 1181 VVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSS 1240
Query: 377 I 375
I
Sbjct: 1241 I 1241
Score = 26.6 bits (56), Expect = 4.2
Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Frame = -2
Query: 713 PIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSILSHSVT 540
PI ++ P+T V S + ++ T S SV+ TP S ++ T
Sbjct: 2111 PITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTST 2170
Query: 539 PIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
PI S+ + I +S+ S V +P S V S P+
Sbjct: 2171 PITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPI 2220
Score = 26.6 bits (56), Expect = 4.2
Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Frame = -2
Query: 713 PIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSILSHSVT 540
PI ++ P+T V S + ++ T S +V+ TP S + +S T
Sbjct: 2171 PITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSST 2230
Query: 539 PIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
PI ++ + I +S+ S V +P S V S P+
Sbjct: 2231 PITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI 2280
Score = 26.6 bits (56), Expect = 4.2
Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V + PI ++ P+T V S + ++ T S +V+ TP S
Sbjct: 2213 VVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSST 2272
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + I +S+ S +P S V S P+
Sbjct: 2273 VVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 2328
Score = 26.6 bits (56), Expect = 4.2
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ PI ++ P+T V S + ++ T S SV+ TP S
Sbjct: 2489 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSST 2548
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ ++ TPI ++ + I + +S+ S V +P S V S P+
Sbjct: 2549 VVNTSTPITSSTVVNSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPI 2604
Score = 26.6 bits (56), Expect = 4.2
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 3/148 (2%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ I ++ P+T V S + I+ T S S++ TP S
Sbjct: 3089 VLNSSTAITSSSIVNSSTPITSSSVLNSSTAITSSSILNSSTPITSSSILNSSTPITSST 3148
Query: 557 LSHSVTPI-AYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPMPMR 381
+ +S TPI + +L T + SST S+V +P S V S P+
Sbjct: 3149 VVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSIV-NSSTPITSSSVLNSSTPITS- 3206
Query: 380 GIATCINWS*SACE*SCCKDSTSFPRTS 297
+T +N S S ST+ +S
Sbjct: 3207 --STTLNTSTPITSSSVLNSSTAITSSS 3232
Score = 26.2 bits (55), Expect = 5.5
Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 2/141 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ PI ++ P+T V S + + T S SV+ TP S
Sbjct: 413 VLNSSTPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSS 472
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPMPMRG 378
+ +S TPI ++ + I +S+ S +P S V S P+
Sbjct: 473 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS-- 530
Query: 377 IATCINWS*SACE*SCCKDST 315
+T +N S S S ST
Sbjct: 531 -STALNTSTSITSSSVLNSST 550
Score = 26.2 bits (55), Expect = 5.5
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ PI ++ P+T V + + ++ T S + + TP S
Sbjct: 461 VLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSS 520
Query: 557 LSHSVTPI-AYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI + +L T + SST +VV T +P S V S P+
Sbjct: 521 VLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPI 576
Score = 26.2 bits (55), Expect = 5.5
Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V + PI ++ P+T V S + ++ T S SV+ TP S
Sbjct: 1493 VVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSS 1552
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + I +S+ S +P S V S P+
Sbjct: 1553 VLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 1608
Score = 26.2 bits (55), Expect = 5.5
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 3/117 (2%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V ++ PI + P+T V S + + T S SV+ TP S
Sbjct: 1577 VVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 1636
Query: 557 LSHSVTPI-AYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI + +L T + SST +VV T +P S V S P+
Sbjct: 1637 VLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVNT-STPITSSTVVNSSTPI 1692
Score = 26.2 bits (55), Expect = 5.5
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V + PI ++ P+T V + + + T+ S SV+ TP S
Sbjct: 2333 VVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTSITSSSVLNSSTPITSST 2392
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ ++ TPI S+ + I +++ S V +P S V S P+
Sbjct: 2393 VVNTSTPITSSSVLNSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPI 2448
Score = 26.2 bits (55), Expect = 5.5
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 3/117 (2%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V + PI ++ P+T V S + ++ T S + + TP S
Sbjct: 2801 VVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSS 2860
Query: 557 LSHSVTPI-AYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI + +L T + SST +VV T +P S V S P+
Sbjct: 2861 VLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPI 2916
Score = 25.8 bits (54), Expect = 7.3
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V ++ PI + P+T V S + + T+ S SV+ TP S
Sbjct: 1265 VVNSSTPITSSTALNTSIPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSST 1324
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ ++ TPI S+ + I +S+ S V +P S V S P+
Sbjct: 1325 VVNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPI 1380
Score = 25.8 bits (54), Expect = 7.3
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V + PI ++ P+T V + + ++ T S +V+ TP S
Sbjct: 1469 VVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSST 1528
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ ++ TPI S+ + I +S+ S V +P S V S P+
Sbjct: 1529 VLNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPI 1584
Score = 25.8 bits (54), Expect = 7.3
Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 2/141 (1%)
Frame = -2
Query: 713 PIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSILSHSVT 540
PI ++ P+T A + + ++ T S +V+ TP S ++ T
Sbjct: 1859 PITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTST 1918
Query: 539 PIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPMPMRGIATCIN 360
PI S+ + I +S+ S V +P S V S P+ +T +N
Sbjct: 1919 PITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITS---STALN 1975
Query: 359 WS*SACE*SCCKDSTSFPRTS 297
S S ST +S
Sbjct: 1976 TSTPITSSSVLNSSTPITSSS 1996
Score = 25.8 bits (54), Expect = 7.3
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 2/141 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ PI ++ P+T V + + ++ T S + + TP S
Sbjct: 2525 VLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSLTALNSSTPITSSS 2584
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPMPMRG 378
+ +S TPI ++ + I +S+ S +P S V S P+
Sbjct: 2585 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS-- 2642
Query: 377 IATCINWS*SACE*SCCKDST 315
+T +N S S S ST
Sbjct: 2643 -STALNTSTSITSSSVLNSST 2662
Score = 25.8 bits (54), Expect = 7.3
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 3/114 (2%)
Frame = -2
Query: 722 ATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSILSH 549
++ PI ++ P+T V + + ++ T S + + TP S + +
Sbjct: 2576 SSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLN 2635
Query: 548 SVTPI-AYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
S TPI + +L T + SST +VV T +P S V S P+
Sbjct: 2636 SSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPI 2688
Score = 25.8 bits (54), Expect = 7.3
Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Frame = -2
Query: 713 PIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSILSHSVT 540
PI ++ P+T A + + ++ T S +V+ TP S + +S T
Sbjct: 2627 PITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSST 2686
Query: 539 PIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
PI ++ + I +S+ S +P S V S P+
Sbjct: 2687 PITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 2736
Score = 25.8 bits (54), Expect = 7.3
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSI 558
++ ++ PI ++ P+T V S + ++ T S + + TP S
Sbjct: 2729 VLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSS 2788
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
+ +S TPI ++ + I +S+ S V +P S V S P+
Sbjct: 2789 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPI 2844
Score = 25.4 bits (53), Expect = 9.7
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Frame = -2
Query: 713 PIVHQGLMTVCPPVTD--VPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSILSHSVT 540
PI ++ P+T V S + ++ T S +V+ TP S ++ T
Sbjct: 1079 PITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTST 1138
Query: 539 PIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
PI S+ + I +++ S V +P S V S P+
Sbjct: 1139 PITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPI 1188
Score = 25.4 bits (53), Expect = 9.7
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Frame = -2
Query: 713 PIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSILSHSVT 540
PI ++ P+T A + + ++ T S +V+ TP S ++ T
Sbjct: 2051 PITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTST 2110
Query: 539 PIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPM 390
PI S+ + I +S+ S V +P S V S P+
Sbjct: 2111 PITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPI 2160
Score = 25.4 bits (53), Expect = 9.7
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Frame = -2
Query: 731 IVVATPPIVHQGLMTVCPPVTDVPASKAES--LNPRIIRGITTSRSFSVIFVETPNNMSI 558
+V + PI ++ P+T A + + ++ T S SV+ TP S
Sbjct: 3017 VVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSST 3076
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPMPMRG 378
++ TPI S+ + AI +S+ S V + S + S P+
Sbjct: 3077 ALNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTAITSSSILNSSTPITSSS 3136
Query: 377 I 375
I
Sbjct: 3137 I 3137
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.9 bits (59), Expect = 1.8
Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Frame = -2
Query: 716 PPIVHQGLMTVCPPVTDVPAS----KAESLNPRIIRGITTSRSFSVI---FVETPNNMSI 558
PP H TV PP T V + N TT S I F T
Sbjct: 123 PPTTHVNTTTVVPPTTHVNTTTVVPPTTHANTTSFVPTTTESSIHPITTGFYNTTFTTGY 182
Query: 557 LSHSVTPIAYRSLRTLAHAILPIIYGSSTN 468
+ SVT +A + T+ +PI+ +S N
Sbjct: 183 FNTSVTSVAVHNSTTVFPTSVPIVNTTSFN 212
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 514 VLSDLYAMGVTECDNMLMLLGVSTKMTEKERDVVIPLIMRGFKDSAL 654
+L+D+Y + C N L LL ++ K + E ++ F S+L
Sbjct: 581 LLTDIYNSDIRSCINSLQLLSLNNKRIDSETIKLLQPKSNSFSTSSL 627
>SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subunit
Rad15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 772
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 265 DLKGRSCKVPQDVLGKLVESLQQDYSQADQDQFM 366
++K K QD KLV LQ + D+DQFM
Sbjct: 271 EVKQSDSKKLQDEYQKLVRGLQDANAANDEDQFM 304
>SPBC1773.08c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 391
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 618 SSYNARVQRFRFGGRNVCHWWAN 686
SSY+A N+CH+W+N
Sbjct: 263 SSYSAETSSMEGESYNMCHFWSN 285
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 22.2 bits (45), Expect(2) = 6.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 478 DPYMMGKIACANVLSDLYAMGVTECDNMLMLLGVSTKMTEKE 603
DPY+M + + LS +Y T + L +ST + +K+
Sbjct: 1167 DPYLMLNLILKHYLSMIYLQFRTYVSFSSLPLHISTVLYQKQ 1208
Score = 21.8 bits (44), Expect(2) = 6.6
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 238 ASFRLTRFADLKGRSCKVPQDVLGKLVESLQQDYSQADQDQ 360
+S L+ A ++ + VP D K+ L + Y D+D+
Sbjct: 1110 SSHELSLVAFIREMAMPVPNDEFKKISTILARGYLALDEDE 1150
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 25.8 bits (54), Expect = 7.3
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 630 HYKRNNDVAF-LFSHFR*DTQQHEHIVALR-NTHRV*VAKNIGTCNLTHHIWVIH*WVKK 457
++ N D A L R Q++E L+ NTH + K G HH WV H W K
Sbjct: 544 YWPDNKDHALCLEGGLRISVQKYETFEDLKVNTHLFRLDKPNGPPKYIHHFWV-HTWFDK 602
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.4 bits (53), Expect = 9.7
Identities = 31/113 (27%), Positives = 45/113 (39%)
Frame = -2
Query: 725 VATPPIVHQGLMTVCPPVTDVPASKAESLNPRIIRGITTSRSFSVIFVETPNNMSILSHS 546
V + P+ PP+ +V A K + +PR+ R + +R + E SHS
Sbjct: 533 VPSSPVQPTSYNRTLPPMPEVVAYKGDEESPRVSRNTSLARRKPLPDTE--------SHS 584
Query: 545 VTPIAYRSLRTLAHAILPIIYGSSTNG*KKSVV*TKQSPPCLSGVTEQSKPMP 387
+P A S++ +I SS KS T Q L T QS P P
Sbjct: 585 PSPSATSSIKKNPSSIFRRF--SSRRKQNKSSTSTLQISAPLE--TSQSPPTP 633
>SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 604
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 553 DNMLMLLGVSTKMTEKERDVVIP 621
D ML ++ STK+ +K D++IP
Sbjct: 312 DRMLEIIPSSTKVLDKASDILIP 334
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1317
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 633 RVQRFRFGGRNVCHWWANCH 692
RV++ GG+N CH A H
Sbjct: 1252 RVRQINVGGKNTCHMQAGDH 1271
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,459,795
Number of Sequences: 5004
Number of extensions: 73691
Number of successful extensions: 284
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -