Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_M14
(784 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.085
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 32 0.60
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.80
SB_29083| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 30 1.8
SB_6360| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0092) 30 2.4
SB_45853| Best HMM Match : VKG_Carbox (HMM E-Value=8.8e-25) 29 3.2
SB_10658| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 29 4.2
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 29 4.2
SB_55022| Best HMM Match : 7tm_1 (HMM E-Value=0.011) 28 7.4
SB_7222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 7.4
SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44) 28 7.4
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 28 9.8
SB_38418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 34.7 bits (76), Expect = 0.085
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 360 DTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGK 503
D +++ K + +LE + DL+ +KRKD+ I+DLN V D + K
Sbjct: 400 DELRKTKKKMQVQYEKLEHQLDDLKVQLKRKDVVIADLNKVVEDYKRK 447
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 31.9 bits (69), Expect = 0.60
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = +3
Query: 357 EDTIKRVCKDYHERIARLE---DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKK 527
ED +++V K +A L+ +EK D E +++ + +++LN+Q+ DL + TL++
Sbjct: 1901 EDELEKVRKKEVSLLATLDTLREEKKDQEQMLQDNGIRLAELNTQIQDLFEE--NKTLEE 1958
Query: 528 VSKYENKFAKLQKKAAEF-NFRNQLKVVKKK 617
K N KL+ A E + + V+K K
Sbjct: 1959 --KVSNDSYKLESAAGEVKSLERERSVLKNK 1987
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 348 DANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV--KPTL 521
D E TIK + ++ + R +DE DL V +K+ E L++Q++DLR + + +
Sbjct: 3021 DIAESTIKNIKQEKN----RFQDEVNDLHGKVSQKNSENELLHAQLDDLRKQITGYQGNI 3076
Query: 522 KKVSKYENKFAKLQKKAAEFNFRNQLK 602
K + + N+ + K + N + K
Sbjct: 3077 KSLEENSNRLQERIKDLEDENLESHKK 3103
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.5 bits (68), Expect = 0.80
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +3
Query: 411 EDEKFD--LEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK--YENKFAKLQKKAAE 578
++EKF L ++ RKD I +LN+++ L+G + K T ++++K EN+ K K+ E
Sbjct: 997 QNEKFSETLNSVISRKDKAIDELNAKIRHLQGDYDK-TRRQLNKILVENENLKGSKEDLE 1055
>SB_29083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 31.5 bits (68), Expect = 0.80
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Frame = +3
Query: 336 KNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKF-- 506
+ ID E+ I +D + RI + E+ D+E I+ K+ ++ L + L+ +
Sbjct: 30 QEIDQLKEENFILETARDEY-RIKADQLER-DVE-ILNEKNEQLQGLAEESQQLKDEMDV 86
Query: 507 VKPTLKKVSKYENKFAKLQKKAAEF-NFRNQLKVVKKKEFT 626
++ +KVSKYE+ +KK E + R Q+K +++K T
Sbjct: 87 LRHMQEKVSKYESTIDMYKKKLEELSDMRKQMKAMEEKNVT 127
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 357 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 485
ED + R + +RI RLE DL+ + +R SD+N++V
Sbjct: 22 EDLMTRRFRGLEDRIGRLESTVSDLQLLQRRNGRFFSDINTRV 64
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = +3
Query: 336 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 515
+ + +NE + RV D E + L+ +K DLE I ++ + +L +L+G
Sbjct: 51 EELQTSNESELMRVRSDLEEMTSLLQSKKVDLEKIKEQNEKAAKEL----TELKGSL--- 103
Query: 516 TLKKVSKYENKFAKLQKKAAEFNFRN 593
+ ++ E+ +L+ K +E N N
Sbjct: 104 -STREAEVESLQGQLKGKTSEINIMN 128
>SB_6360| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0092)
Length = 107
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +3
Query: 384 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 563
D + ++ L + DL+ V D ++ DLN++V+DL K V KV K L
Sbjct: 26 DLNAKVHDLNTKVHDLDTKVHDLDTKVHDLNTKVHDLNTK-VHDLNTKVHDLNTKVHDLN 84
Query: 564 KKAAEFN 584
K + N
Sbjct: 85 TKVHDLN 91
>SB_45853| Best HMM Match : VKG_Carbox (HMM E-Value=8.8e-25)
Length = 854
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/83 (21%), Positives = 41/83 (49%)
Frame = +3
Query: 375 VCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFA 554
VC + R++R +F ++ D+ +D + + +V+P L ++S + +K
Sbjct: 580 VCTGIYVRMSRFPSRRFQQRFVNPNIDILHADWSPFQ---KTTWVQPLLMELSPWRSKLK 636
Query: 555 KLQKKAAEFNFRNQLKVVKKKEF 623
+++KK ++ + N VV +F
Sbjct: 637 EIEKKQSQSSLGNFTDVVFVADF 659
>SB_10658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 528 VSKYENKFAKLQKKAAEFNFR-NQLK 602
V KYEN+ LQ+K EF+F+ N++K
Sbjct: 13 VEKYENEVTVLQEKIKEFDFKTNEIK 38
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 354 NEDTIKRV-CKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKV 530
NE I R CKD I+R LE ++ I L + +N+L K+
Sbjct: 366 NELVISRKKCKDQGAEISRQSSHIGKLEATKLSQETNIRSLKANINELN--------SKL 417
Query: 531 SKYENKFAKLQKK 569
SKYE + +L+K+
Sbjct: 418 SKYEGDYEELEKQ 430
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 384 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK--KVSKYENKFAK 557
D + ++ L + DL V + ++ DLN++VNDL K K + KV+ K
Sbjct: 348 DLNTKVHDLNTKLHDLNTKVHDLNAKVHDLNTKVNDLNTKNTKVNDQNTKVNDLNTKVHD 407
Query: 558 LQKKAAEFN 584
L K + N
Sbjct: 408 LNAKVHDLN 416
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +3
Query: 384 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 563
D + ++ L + DL V + ++ DLN++VNDL K V KV K L
Sbjct: 299 DLNTKLHNLNTKLHDLNTKVHDLNTKLHDLNTKVNDLNTK-VHDFNTKVHDLNTKVHDLN 357
Query: 564 KKAAEFN 584
K + N
Sbjct: 358 TKLHDLN 364
>SB_55022| Best HMM Match : 7tm_1 (HMM E-Value=0.011)
Length = 441
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 619 SFFFTTFNWLRKLNSAAFFWSLANLFSYLETFFSVGLTN 503
+ FF FN + L SA F WS+ L S T FS +N
Sbjct: 79 ALFFALFNTVLVLISAVFIWSI--LSSSRRTLFSARFSN 115
>SB_7222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 393 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 572
E + R + E DL+ V +I LN + ND+R + + + + +E +K+
Sbjct: 231 EFVKRHKQEILDLQTTVDTLQEQIKHLNDEKNDIRRSYKREMDEMGAGFEG-----EKRR 285
Query: 573 AEFNFRNQL 599
E+ FR ++
Sbjct: 286 LEYRFRREI 294
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/24 (41%), Positives = 20/24 (83%)
Frame = +3
Query: 348 DANEDTIKRVCKDYHERIARLEDE 419
+ +E+ +++V +DY E+IARL++E
Sbjct: 144 EPDEEQLEQVRRDYEEQIARLQEE 167
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/54 (22%), Positives = 31/54 (57%)
Frame = +3
Query: 351 ANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 512
A+++ I+ + ++++++DE +L+ R+ EI DL +++N+L +
Sbjct: 1352 ASKEYIEGQLESLKAQMSKIKDENENLKESDARRQQEILDLENRINELENMLAR 1405
>SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44)
Length = 788
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 357 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK 536
++T+ RV D R L++E+ + + D E+SD+ SQ+ + K V K
Sbjct: 374 QETLTRV--DLENRCQSLQEEQ---NFKKQMYDKELSDIRSQLKTVETKRVVVETDYKDK 428
Query: 537 YENKFA-KLQKKAAEFN 584
YE A KLQ+ +++
Sbjct: 429 YEGLMAEKLQELREDYD 445
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Frame = +3
Query: 360 DTIKRVCKDYHERIARLED-------EKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 518
D ++R D H +I E+ E DL+ +K ++ E ++ N+LRGK K
Sbjct: 1088 DGVRRELIDAHRKIREGEEAREVARKENTDLKRQLKDEEREKDAVSHTANELRGKVKKSE 1147
Query: 519 LKKVSKYENKFAKLQKKAAEFNFRNQLK 602
+K + QK A+ RN L+
Sbjct: 1148 AEKTNLRRQLDEASQKIASLEETRNGLQ 1175
>SB_38418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 459 EISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKK 569
EI +V++L+G+F K + + + + F KLQ K
Sbjct: 112 EIEGFFDEVHELKGQFNKYKMNTIPRLQEVFKKLQSK 148
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,284,717
Number of Sequences: 59808
Number of extensions: 251685
Number of successful extensions: 746
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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