Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_M13
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    26   0.28 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   1.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    24   1.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   1.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.0  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 611 FSWHFDYIKCIIYDFDCALVTFNTAF 534
           F+  +D + C+ Y FD A++   T+F
Sbjct: 464 FANFYDAMICVAYKFDAAMMALRTSF 489


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 176 RHHIRVINRHAHYFSNSIRFQ 114
           RHH  V + H H+F +  ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 176 RHHIRVINRHAHYFSNSIRFQ 114
           RHH  V + H H+F +  ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 176 RHHIRVINRHAHYFSNSIRFQ 114
           RHH  V + H H+F +  ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
 Frame = +2

Query: 431 LNNIKTKLRRF*PHL*HFVTYFF--------LAAFKILSKLRQRL 541
           L  I T L+R+   L  F+TYFF        L A KILSK+ + L
Sbjct: 66  LAKITTILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSKIDETL 110


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
 Frame = +2

Query: 431 LNNIKTKLRRF*PHL*HFVTYFF--------LAAFKILSKLRQRL 541
           L  I T L+R+   L  F+TYFF        L A KILSK+ + L
Sbjct: 62  LAKITTILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSKIDETL 106


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 180  KPPSHTGH*QTRT 142
            +PPS T H QT+T
Sbjct: 1175 RPPSTTNHWQTKT 1187


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 51  GAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVND 161
           G F  G   T   GY  +  K K  G   IV +S++D
Sbjct: 383 GGFWVGYEDTDTAGYKASYVKAKGLGGIAIVDLSLDD 419


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = +2

Query: 182 GSSAQHQRKGAYASRSQRQL-HQGSGPGHQSAAARRF 289
           GSS QH    A  S + R   +  +   H  AAA  F
Sbjct: 42  GSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAF 78


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = +2

Query: 182 GSSAQHQRKGAYASRSQRQL-HQGSGPGHQSAAARRF 289
           GSS QH    A  S + R   +  +   H  AAA  F
Sbjct: 42  GSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAF 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,922
Number of Sequences: 336
Number of extensions: 4214
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)