Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_M08
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97004-3|AAB52277.1| 365|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical ... 37 0.014
U97004-2|AAB52275.2| 218|Caenorhabditis elegans Hypothetical pr... 35 0.055
U80030-12|AAG24159.1| 391|Caenorhabditis elegans Hypothetical p... 35 0.055
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 33 0.30
Z93382-7|CAB07618.1| 214|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL021488-4|CAA16363.2| 531|Caenorhabditis elegans Hypothetical ... 29 3.6
U88169-5|AAB42235.2| 367|Caenorhabditis elegans Hypothetical pr... 29 4.8
U00057-1|AAA50726.2| 347|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF162673-1|AAF80461.1| 568|Caenorhabditis elegans CNT-like nucl... 28 6.4
AF016413-5|AAB65255.1| 568|Caenorhabditis elegans Hypothetical ... 28 6.4
Z72515-5|CAH60771.2| 331|Caenorhabditis elegans Hypothetical pr... 28 8.4
U64834-3|AAB04824.1| 437|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 28 8.4
>U97004-3|AAB52277.1| 365|Caenorhabditis elegans Hypothetical
protein R08E5.3 protein.
Length = 365
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = +3
Query: 222 GDRVIDLGCADGSVTDILKVYMPKNYGRLVGCDISEEMVKYANKHHGFGRTSFRVLD-IE 398
G RV+D+GC G + +L PK++ VG DI E+ ++ A + +F L+ IE
Sbjct: 176 GVRVLDVGCGGGFHSSLLAEQYPKSH--FVGLDIGEDAIRQAKQRKTKSGAAFNNLEFIE 233
Query: 399 ---GDLTADLKQGFDHVFSFYTLHWIRDQERAFRNIFNLLGDEG 521
G + FD V F H R + + I +L G
Sbjct: 234 CDAGKMPEIWTDSFDLVLIFDACHDQRRPDLCVQEIHRVLKPSG 277
>AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical
protein R08F11.4 protein.
Length = 354
Score = 37.1 bits (82), Expect = 0.014
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +3
Query: 201 KIKWKKIGDRVIDLGCADGSVTDILKVYMPKNYGRLVGCDISEEMVKYANKHHGFGRTSF 380
K K + G RV+D+GC G + +L + PK+ + VG DI+E+ +K A T F
Sbjct: 159 KEKLEAGGIRVLDVGCGGGFHSGLLAEHYPKS--QFVGLDITEKAIKAARLKKKSDGTDF 216
Query: 381 RVLD-IEGD---LTADLKQGFDHVFSFYTLH 461
L+ + D + + FD V F + H
Sbjct: 217 ENLEFVVADAAIMPSSWTDSFDLVILFGSCH 247
>U97004-2|AAB52275.2| 218|Caenorhabditis elegans Hypothetical
protein R08E5.1 protein.
Length = 218
Score = 35.1 bits (77), Expect = 0.055
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 222 GDRVIDLGCADGSVTDILKVYMPKNYGRLVGCDISEEMVKYANKHHGFGRTSFRVLDI-- 395
G RV+D+GC GS + +L PK VG +I E+ ++ A + +F L+
Sbjct: 113 GMRVLDVGCGGGSHSSLLAEQYPK--AHFVGLEIGEDAIRQAKQRKTKSGAAFNNLEFIQ 170
Query: 396 --EGDLTADLKQGFDHVFSFYTLH 461
G + FD V F H
Sbjct: 171 CDAGKMPEIWTDSFDLVLIFDACH 194
>U80030-12|AAG24159.1| 391|Caenorhabditis elegans Hypothetical
protein K12D9.1 protein.
Length = 391
Score = 35.1 bits (77), Expect = 0.055
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +3
Query: 201 KIKWKKIGDRVIDLGCADGSVTDILKVYMPKNYGRLVGCDISEEMVKYANKHHGFGRTSF 380
K K + G RV+D+GC +G + +L K+ + VG DI E+ +K A + + F
Sbjct: 196 KEKLEDGGFRVLDVGCGEGFHSCLLAENYSKS--QFVGLDICEKAIKSAKLNKKSDGSDF 253
Query: 381 RVLD-IEGD---LTADLKQGFDHVFSFYTLHWIRDQERAFRNIFNLLGDEGDCLL 533
+ L+ + GD + D FD V F +LH + + + + +L G +L
Sbjct: 254 QNLEFVVGDAMIMPEDWTGCFDLVAFFGSLHDLLRPDLSLLEVHRVLKPGGMVVL 308
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 32.7 bits (71), Expect = 0.30
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Frame = +3
Query: 219 IGDRVIDLGCADGSVT-DILKVYMPKNYGRLVGCDISEEMVKYANKHHGFGRTSFRVLDI 395
+G V+D+GC +G + D L+ K + G D SEEM++ F + ++ +
Sbjct: 36 VGKEVLDVGCGNGHYSFDFLRWGAHK----VFGVDNSEEMIQICKSSPDFENFNSKIDFL 91
Query: 396 EGDLTADLKQG--FDHVFSFYTLHWIR---DQERAFRNIFNLLGDEG 521
G++T G FD +F+ L ++ D A +NI L G
Sbjct: 92 LGEVTNFHVDGASFDVATAFFVLQFLHKNDDVALAIQNISRHLKSRG 138
>Z93382-7|CAB07618.1| 214|Caenorhabditis elegans Hypothetical
protein F45G2.9 protein.
Length = 214
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 144 KSNSLQKRDALRCLEEHANKIKWKKIGDRVIDLGCADGSVTDILKVYMPKNY 299
+ ++ + R A + +E + K K+ K VID+GCA GS ++ P Y
Sbjct: 28 REHNYRARSAFKLIEIN-EKFKFLKPESTVIDIGCAPGSWLQVVVQKCPNGY 78
>Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical
protein F26A3.6 protein.
Length = 487
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 525 CLLLFLGHTPIFDVYRTLSHTEKWHSWLEHVDRFISP 635
C+ LF+ H+ F ++RT S TEK S H D+ P
Sbjct: 19 CVALFVLHSLYF-IFRTASQTEKTESKTVHDDQLFIP 54
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 60 NLKKKSADKYFIAKKNIKSKMNNADLYRK-SNSLQKRDALRCLEEHANKIK 209
N KK +K +AKK+ S DLY+K S+++ K + +EE A+K++
Sbjct: 496 NSKKSEEEKEELAKKDQMSTEEQKDLYKKISSAVMKAAKIHKIEE-ADKVQ 545
>AL021488-4|CAA16363.2| 531|Caenorhabditis elegans Hypothetical
protein Y45F10A.7a protein.
Length = 531
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 534 LFLGHTPIFDVYRTLSHTEKWHSWLEHVDR 623
+++GH D+ R + T KW S +EHV R
Sbjct: 76 IYIGHET--DLERVIGETNKWESLVEHVRR 103
>U88169-5|AAB42235.2| 367|Caenorhabditis elegans Hypothetical
protein T03F1.7 protein.
Length = 367
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 20 VRTATHRTRLVQ--YELKKKKCRQIFYCKKKY*VK 118
VR +T LV +E+ +K CRQ+F+ ++KY K
Sbjct: 228 VRFVPRKTPLVNTSFEVLEKVCRQVFHYRQKYVTK 262
>U00057-1|AAA50726.2| 347|Caenorhabditis elegans Hypothetical
protein T24G10.2 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.4
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Frame = +3
Query: 63 LKKKSADKYFIAKKNIKSKMNNADLYRKSNSLQKRDALRCLEEHANKIKWKKIGDRVIDL 242
++ S F K K K NAD+ + K + + K +W K D V L
Sbjct: 165 IRNTSEGGRFANNKKKKVKDPNADMSGVFGPMTKLCYISTELQQVTKDQWMKRCDVVKAL 224
Query: 243 GCADGSVTDILKVYMPKNYGRLVGCDISEEMVKYANKHHGFGRTSFRVLDIEG--DLTAD 416
D + LK PKN G+ + CD + E + N+ GFG F I G D+ +
Sbjct: 225 W--DYIKENNLKD--PKN-GQYIICDSTLESIFKKNRLKGFGMVKFLTRHIIGTSDMAPE 279
Query: 417 LKQ 425
+++
Sbjct: 280 MRE 282
>AF162673-1|AAF80461.1| 568|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 568
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 352 LFAYFTISSLMSQPTNLP*FFGM*TFKISVTLPSAQPKSMTLSPIFFHLILFAC 191
LFAY TI +S+PT L F G F I + + S +P+ + + + LI C
Sbjct: 126 LFAY-TIVESLSEPTRLTGFGGYVFFVIFMVVFSNRPRKINWNIVTSALIFHYC 178
>AF016413-5|AAB65255.1| 568|Caenorhabditis elegans Hypothetical
protein F27E11.1 protein.
Length = 568
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 352 LFAYFTISSLMSQPTNLP*FFGM*TFKISVTLPSAQPKSMTLSPIFFHLILFAC 191
LFAY TI +S+PT L F G F I + + S +P+ + + + LI C
Sbjct: 126 LFAY-TIVESLSEPTRLTGFGGYVFFVIFMVVFSNRPRKINWNIVTSALIFHYC 178
>Z72515-5|CAH60771.2| 331|Caenorhabditis elegans Hypothetical
protein T11A5.7 protein.
Length = 331
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 90 FIAKKNIKSKMNNADLYRKSNSLQKRDALRCLEEHAN 200
F KN++S M + L + Q +++++CL+ +AN
Sbjct: 207 FHVNKNLRSSMQRSSLSTRFQLEQNKNSMQCLKIYAN 243
>U64834-3|AAB04824.1| 437|Caenorhabditis elegans Hypothetical
protein F54D11.1 protein.
Length = 437
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +3
Query: 312 GCDISEEMVKYANKHHGFGRTSFRVLDIEGDLTADLKQG-FDHVFSFYTLHWIRDQERAF 488
G D+S M+ A + + S I L + FD+VFS + I D E+ F
Sbjct: 252 GIDLSSNMLAIALERLHEEKDSRVKYSITDALVYQFEDNSFDYVFSRDCIQHIPDTEKLF 311
Query: 489 RNIFNLLGDEGDCLLLFLG 545
I+ L G L+ G
Sbjct: 312 SRIYKALKPGGKVLITMYG 330
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 QKRDALRCLEEHANKIKWKKIGDRVIDLGCADG-SVTDILKVYMPKNY 299
+K + + EE + I W +I + IDLG DG TD+ + +PK Y
Sbjct: 73 EKAEHILSEEEDSQVIAWFRINKKPIDLG--DGRRTTDLTFLEVPKYY 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,925,485
Number of Sequences: 27780
Number of extensions: 437134
Number of successful extensions: 1222
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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