Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_M07
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021808-2|CAB36861.1|  971|Homo sapiens POM121 membrane glycopr...    31   3.7  
BC067107-1|AAH67107.1|  814|Homo sapiens putative neuronal cell ...    31   4.8  
BC042054-1|AAH42054.1|  814|Homo sapiens putative neuronal cell ...    31   4.8  
AF063936-1|AAD13399.1|  308|Homo sapiens putative neuronal cell ...    31   6.4  

>AL021808-2|CAB36861.1|  971|Homo sapiens POM121 membrane
           glycoprotein-like 2 (rat) protein.
          Length = 971

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
 Frame = -1

Query: 341 TVTAFRCSFSKKYGLMIPPYHKPH----HTVTFF 252
           T  AFR  F+   G + PP+H P     HTVT F
Sbjct: 605 TAQAFRADFTPATGFIFPPHHHPTIPTVHTVTMF 638


>BC067107-1|AAH67107.1|  814|Homo sapiens putative neuronal cell
           adhesion molecule protein.
          Length = 814

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -3

Query: 438 GAVLLGPRVTDVNISQLWPQKIGYHGLVAQRIHGDGVSLLIFEKIR 301
           G +LL   V+  N+SQL P  +    L+A   HGDG + + F  +R
Sbjct: 568 GPILLPGTVSSYNLSQLDPTAVYEVKLLAYNQHGDGNATVRFVSLR 613


>BC042054-1|AAH42054.1|  814|Homo sapiens putative neuronal cell
           adhesion molecule protein.
          Length = 814

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -3

Query: 438 GAVLLGPRVTDVNISQLWPQKIGYHGLVAQRIHGDGVSLLIFEKIR 301
           G +LL   V+  N+SQL P  +    L+A   HGDG + + F  +R
Sbjct: 568 GPILLPGTVSSYNLSQLDPTAVYEVKLLAYNQHGDGNATVRFVSLR 613


>AF063936-1|AAD13399.1|  308|Homo sapiens putative neuronal cell
           adhesion molecule protein.
          Length = 308

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -3

Query: 438 GAVLLGPRVTDVNISQLWPQKIGYHGLVAQRIHGDGVSLLIFEKIR 301
           G +LL   V+  N+SQL P  +    L+A   HGDG + + F  +R
Sbjct: 62  GPILLPGTVSSYNLSQLDPTAVYEVKLLAYSQHGDGNATVRFVSLR 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,611,363
Number of Sequences: 237096
Number of extensions: 2653308
Number of successful extensions: 4913
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4904
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)