Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_M03
(752 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0058 - 3704138-3704257,3704355-3704421,3704502-3704641,370... 252 2e-67
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053... 31 1.3
02_03_0007 - 13875735-13875826,13876217-13877465 31 1.3
01_06_1591 - 38484790-38485467,38486165-38486292,38487098-38487356 31 1.3
06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398 30 2.3
02_02_0737 - 13529180-13529543,13530661-13531178 29 3.0
04_04_0448 - 25314042-25314183,25314271-25314321,25314437-253150... 29 4.0
01_01_0051 + 389051-389623 29 4.0
07_03_0025 + 12587868-12588429,12591820-12592031,12592212-125926... 28 6.9
05_06_0070 + 25342965-25343882,25343968-25344618 28 6.9
04_04_1476 - 33863067-33863148,33863239-33863310,33863393-338634... 28 6.9
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486... 28 6.9
02_05_1287 - 35459419-35459955,35460043-35460966,35461881-354622... 28 6.9
10_05_0103 - 9186758-9187345,9187395-9187951,9188265-9188376 28 9.2
02_05_1256 - 35281926-35282635,35282711-35283112,35283508-35283814 28 9.2
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 28 9.2
>09_02_0058 -
3704138-3704257,3704355-3704421,3704502-3704641,
3705332-3705424,3705927-3706109,3706491-3706595,
3706738-3706818,3706905-3707046,3707207-3707286,
3707456-3707568,3708051-3708297,3708659-3709051
Length = 587
Score = 252 bits (617), Expect = 2e-67
Identities = 125/199 (62%), Positives = 149/199 (74%)
Frame = +1
Query: 154 DESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVL 333
DE LYPIA+LIDELKNED+QLRLNSI++LSTIA ALG ERT+ ELIPFL+E DEDEVL
Sbjct: 5 DEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDEDEVL 64
Query: 334 LALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEE 513
LA+AE+LG FI VGG E AH LLPPLETL VEET VRDKAV SL + + +
Sbjct: 65 LAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKESDIVD 124
Query: 514 HFVPLVQRLAGGDWFTSRTSACGLFSVCYPRVSAPVKAELRQHFRSLCQDDTPMVRRAAA 693
FVP+V+RLA G+WFT+R S+CGLF + YP +KAELR + LCQDD PMVRRAAA
Sbjct: 125 WFVPVVKRLAAGEWFTARVSSCGLFHIAYPSAPDQLKAELRTIYGQLCQDDMPMVRRAAA 184
Query: 694 YKLGEFAKVVEIEYVXSDL 750
LG+FA VE Y+ +++
Sbjct: 185 SNLGKFAATVEQNYLKTEV 203
Score = 52.0 bits (119), Expect = 5e-07
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 1/161 (0%)
Frame = +1
Query: 151 TDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-E 327
T E L PI + + LK+E +RLN I KL + +G++ L+P + E D
Sbjct: 355 TIEQLLPIFLSL--LKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWR 412
Query: 328 VLLALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQAL 507
V LA+ E + + +G G F L + +RD A +L+ +AE P+
Sbjct: 413 VRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWA 472
Query: 508 EEHFVPLVQRLAGGDWFTSRTSACGLFSVCYPRVSAPVKAE 630
+H +P V + R + S+ P + A + +
Sbjct: 473 MQHIIPQVLEKINNPHYLYRMTILQAISLLAPVMGAEITCQ 513
Score = 45.2 bits (102), Expect = 6e-05
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 3/193 (1%)
Frame = +1
Query: 181 LIDELKNEDVQ-LRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLLALAEQL 354
+ D+L +D +RL +++ + + L + + ++P + D+ V +A QL
Sbjct: 206 IFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQL 265
Query: 355 GSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEEHFVPLVQ 534
VG L+P L E VR A + SPQ +H +P V+
Sbjct: 266 YELCEAVGPEHSREQLVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPQLAIQHILPCVK 325
Query: 535 RLAGGDWFTSRTSACGLFSVCYPRVSAPVKAE-LRQHFRSLCQDDTPMVRRAAAYKLGEF 711
L+ R++ + P + E L F SL +D+ P VR KL +
Sbjct: 326 ELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLDQV 385
Query: 712 AKVVEIEYVXSDL 750
+V+ I+ + L
Sbjct: 386 NQVIGIDLLSQSL 398
>02_05_1074 -
33904518-33904697,33904886-33904985,33905085-33905311,
33905511-33908384,33908467-33908643,33908786-33909008,
33909727-33909806,33910657-33910817,33910892-33910937,
33911129-33911251,33911730-33911804,33911920-33912120
Length = 1488
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 151 TDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEV 330
T++ L PI L + D QLR ++ + +G + L+P+L + + DE EV
Sbjct: 742 TNDFLLPILPAF--LNDRDEQLRAVYFGQIVVVCYFIGSRSVEEYLLPYLEQALSDEMEV 799
Query: 331 LL 336
+L
Sbjct: 800 VL 801
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +1
Query: 157 ESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLL 336
+S+Y I + + + +R ++ + + G +T L+P L + D DE L
Sbjct: 703 KSIYEIVQELVMGQKQTPNVRRALLQDIGYLCYFFGHRQTNDFLLPILPAFLNDRDEQLR 762
Query: 337 AL-AEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASL 471
A+ Q+ +G LLP LE + E VV K + L
Sbjct: 763 AVYFGQIVVVCYFIGSRSVEEYLLPYLEQALSDEMEVVLVKVLDCL 808
>02_03_0007 - 13875735-13875826,13876217-13877465
Length = 446
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 325 EVLLALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQA 504
E+LL +L S +GG EF+ +P A+ ++ ++ + AV H SP+A
Sbjct: 219 ELLLINTPRLDSLKITLGGNEFS---VPFSRARIALTNPLLEIESAKEITAVPPHESPKA 275
Query: 505 LEEHFVP 525
L E VP
Sbjct: 276 LLEDEVP 282
>01_06_1591 - 38484790-38485467,38486165-38486292,38487098-38487356
Length = 354
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = -1
Query: 593 TLNSPQADVLEVNQSPPARRCTSGTKCSSSACGLWCSATARSEATALSRTTVSSTAANVS 414
T NS + L ++PP ++ G WCS R A + VS++ S
Sbjct: 5 TPNSGGSSCLPARRTPPPLAAAGEAGSLAAGPGRWCSWRRRQPAERWPKLAVSASGRK-S 63
Query: 413 RGGRRQCANSPP 378
+GGR + P
Sbjct: 64 KGGRDEGGGDEP 75
>06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398
Length = 187
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 542 ARRCTSGTKCSSSACGLWCSATARSEATALSRTTVSSTAA-NVSRGGRRQCANSP 381
A+RC G +SAC S++A + A A T STAA + S G A P
Sbjct: 104 AKRC--GVTTDASACAKSASSSATAAAAAAGAGTAGSTAASSASTGNAASTAAKP 156
>02_02_0737 - 13529180-13529543,13530661-13531178
Length = 293
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -1
Query: 587 NSPQADVLEVNQSPPARRCTSGTKCSSSACGLWCSATARSEATALSRTTVSSTAA 423
+SPQ +V + P RR S T SSS+C +A +R + S T SST++
Sbjct: 79 SSPQPRPPQVRRPQPPRRHRS-TAPSSSSCQFQAAAPSRPPSALPSPTASSSTSS 132
>04_04_0448 -
25314042-25314183,25314271-25314321,25314437-25315033,
25315151-25315353
Length = 330
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -1
Query: 593 TLNSPQADVLEVNQSPPARRCTSGTKCSSSAC-GLWCSATARSEATALSRTTVSSTA 426
+L +P + +L + + SG+ CSS AC G+ CSA + + T VSST+
Sbjct: 16 SLRTPLSPLLFLRPASCNPSAVSGS-CSSGACRGVRCSAANKPSPSTAPGTEVSSTS 71
>01_01_0051 + 389051-389623
Length = 190
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = -1
Query: 584 SPQADVLEVNQSPPARRCTSGTKCSSSACGLWCSATARSEATALSRTTVSSTAANVSRGG 405
+P A L+ Q TS + SSS+ S ++ S +++ S ++ SS+ +++R
Sbjct: 82 APAASSLKDRQRSSHGTDTSSSSESSSSSSSSSSESSSSSSSSSSESSSSSSDDDLAR-- 139
Query: 404 RRQCANSPPPTKLMK 360
RRQ N PP + K
Sbjct: 140 RRQQRNPSPPPQYKK 154
>07_03_0025 +
12587868-12588429,12591820-12592031,12592212-12592603,
12592608-12592965
Length = 507
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 325 EVLLALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQA 504
E LL +LGS +G EF+ +P + +++ ++ + AV H SP+A
Sbjct: 115 EQLLINTPRLGSLKITLGENEFS---IPFSRARITLTDSLPEIESAEEVTAVPPHESPEA 171
Query: 505 LEEHFVP 525
L E VP
Sbjct: 172 LLEDEVP 178
>05_06_0070 + 25342965-25343882,25343968-25344618
Length = 522
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 316 DEDEVLLALAEQLGSFINLVGGGEFAHCLLPPLETL---AAVEETVVRDKAVAS 468
DED V + EQLG L + A L PP+ L A+E+TV+ VA+
Sbjct: 353 DEDTVAVVREEQLGKMTLLRAAMKEAMRLHPPVPLLIPREAIEDTVLHGHRVAA 406
>04_04_1476 -
33863067-33863148,33863239-33863310,33863393-33863472,
33863549-33863611,33863837-33863924,33864277-33864339,
33864421-33864494,33864683-33864732,33866126-33866295,
33867041-33867120
Length = 273
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 318 IIDCLSEERDQLRFSPL-HAQSQRDRRQLLYRVQT 217
I+DCLS+ D SP+ H + R+ L+Y V T
Sbjct: 101 ILDCLSKSSDSDHSSPVEHLSCRSSRKTLIYLVLT 135
>03_05_0944 + 29046793-29046922,29048091-29048464,29048556-29048687,
29048829-29049210,29049370-29049513,29049593-29049777,
29049925-29050051,29050603-29050676,29051071-29051147,
29051256-29051292,29051453-29051619,29051800-29051983,
29052053-29052130,29052451-29052570,29052648-29052707,
29053057-29053179,29053848-29053941,29054019-29054197,
29054737-29055039,29055373-29055474,29055553-29055693,
29055831-29055995,29056168-29056344,29056432-29056554,
29057787-29057867,29057983-29058099,29058214-29058386,
29058846-29058923,29058994-29059141,29059755-29059877,
29060015-29060071,29060145-29060255,29060382-29060573,
29060690-29060863,29061263-29061373,29061462-29061531,
29061734-29061812,29061898-29062000,29062086-29062256,
29062348-29062470,29062548-29062661,29062935-29063041,
29063117-29063168,29063245-29063351,29063589-29063703,
29063819-29063929,29064016-29064153,29064230-29064352,
29064535-29064606,29064774-29064886,29066780-29067110,
29067199-29067381,29068669-29068863,29068943-29069110,
29069208-29069340,29069511-29069595,29069726-29069765
Length = 2591
Score = 28.3 bits (60), Expect = 6.9
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Frame = +1
Query: 148 GTDESLYPIAV--LIDELKNEDVQL-RLNSIKKLSTIALALGVERTKSELIPFLTETIYD 318
G E ++P V L+D LK++ + R + + LS + ALG + +++P +
Sbjct: 1609 GMGEEIFPDLVPWLLDTLKSDSSNVERSGAAQGLSEVLAALGKDYF-DQILPDIIRNCSH 1667
Query: 319 EDEVLLALAEQLGSFINLVGGGEFAHCL---LPPLETLAAVEETVVRDKAVASLRAVAEH 489
+ + L ++ GG F + L LP + A E VRD A+++ EH
Sbjct: 1668 QKASVRDGHLTLFRYLPRSLGGVFQNYLQIVLPAILDGLADENESVRDAALSAGHVFVEH 1727
Query: 490 HSPQAL 507
++ +L
Sbjct: 1728 YATSSL 1733
>02_05_1287 -
35459419-35459955,35460043-35460966,35461881-35462268,
35463645-35463748,35464740-35464928,35465231-35465362
Length = 757
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 569 VLEVNQSPPARR-CTSGTKCSSSACGLWCSATARSEATALSRTT 441
V+E QSP + C +G++CSSS S T+ S A A T
Sbjct: 60 VVEQLQSPNSTSPCMTGSRCSSSTTARRISVTSASAAAAADDLT 103
>10_05_0103 - 9186758-9187345,9187395-9187951,9188265-9188376
Length = 418
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 325 EVLLALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQA 504
E L+ + GS ++G EF+ +P + + + ++V + AV H SP+A
Sbjct: 306 EQLIINTPRFGSLKIILGENEFS---IPFSRARITLTDPLPEIESVEEVTAVPPHESPEA 362
Query: 505 LEEHFVP 525
L E VP
Sbjct: 363 LLEDEVP 369
>02_05_1256 - 35281926-35282635,35282711-35283112,35283508-35283814
Length = 472
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 497 GLWCSATARSEATALSRTTVSSTAANVSRGGRRQ 396
GLW S+ + S +++ S S++ +N R RR+
Sbjct: 60 GLWFSSLSTSSSSSSSAAATSASGSNAKRRSRRE 93
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 587 NSPQADVLEVNQSPPARRCTSGTKCSSSACGLWCSATARSEATALSRT 444
+S D L N P RR + G CS G+ CS + + + SR+
Sbjct: 280 SSSSDDELLHNSIKPGRRNSGGPSCSICKIGIACSFLIKCKNSTCSRS 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,432,117
Number of Sequences: 37544
Number of extensions: 368161
Number of successful extensions: 1339
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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