Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_M02
         (837 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.3  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   6.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.1  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
 Frame = +2

Query: 191 KMPPTIQTGEAERDKRPTRTGERRSELLT----KVKYCNTLPDIPFDLKFITYPFPSTRF 358
           ++PP  Q GE+E   R  R  ER++ + +    K+   + LP       ++ +   STR 
Sbjct: 219 RLPPVWQGGESEALARLERHLERKAWVASFGRPKMTPQSLLPSQTGLSPYLRFGCLSTRL 278

Query: 359 VQYNPTSLEKSYR 397
             Y  T L K  +
Sbjct: 279 FYYQLTDLYKKIK 291


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 224 LLHLFVLWVAFYHLFSLHFN 165
           L  + +LW++F+  F LH N
Sbjct: 138 LFFVILLWISFFLNFMLHCN 157


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 200 VAFYHLFSLHFNIHLYTDFI 141
           V   H+F LH N  +Y D +
Sbjct: 85  VLHIHIFDLHRNAEIYPDLL 104


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 188  DKMPPTIQTGEAERDKRP 241
            D+ PP+++  E ER++ P
Sbjct: 1779 DEEPPSVEAVEEEREEAP 1796


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 323 KFITYPFPSTRFV 361
           + I++PFP T+F+
Sbjct: 167 RVISFPFPETQFI 179


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +2

Query: 479 PLDPADEKLLEDDVLTPQDSKRSRHHAKNVSWLRRSEYI 595
           P D  ++ + E D ++ Q +     +  N+SW     +I
Sbjct: 607 PFDFGEDSINEGDGVSVQCTVSKGDYPLNISWTLNGHFI 645


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,189
Number of Sequences: 336
Number of extensions: 4281
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)