Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_L22
(420 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 23 1.2
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 3.7
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 4.9
AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine 3-mon... 21 4.9
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 21 4.9
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 21 4.9
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 4.9
AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine 3-mon... 21 6.4
AY052623-1|AAL15471.1| 101|Tribolium castaneum kynurenine 3-mon... 21 6.4
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 6.4
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 23.0 bits (47), Expect = 1.2
Identities = 10/40 (25%), Positives = 16/40 (40%)
Frame = +1
Query: 67 PKRLXXLGKSGTRYGASLRKMVKKLEVTQHAKYTCSFCGK 186
PKR ++ S ++ + T Y+C CGK
Sbjct: 76 PKRQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGK 115
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.4 bits (43), Expect = 3.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 2 GRPMFFSVNFCLGSVSQNG 58
GR VNFC S QNG
Sbjct: 332 GRHCESKVNFCATSPCQNG 350
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 4.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 122 VKWSKSWK*PNTQSI 166
+KW K K PNT+++
Sbjct: 286 MKWKKDNKLPNTKNV 300
>AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 290
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +2
Query: 197 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 334
+V+V GLV + + GY L + D+ + + + ++N
Sbjct: 8 SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +2
Query: 197 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 334
+V+V GLV + + GY L + D+ + + + ++N
Sbjct: 8 SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53
Score = 20.6 bits (41), Expect = 6.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 187 PYHKMSKYTLRVGLLPAF*PFY 122
PYH SK+ L A PFY
Sbjct: 291 PYHVGSKFLLIGDAAHAMVPFY 312
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +2
Query: 197 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 334
+V+V GLV + + GY L + D+ + + + ++N
Sbjct: 8 SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53
Score = 20.6 bits (41), Expect = 6.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 187 PYHKMSKYTLRVGLLPAF*PFY 122
PYH SK+ L A PFY
Sbjct: 291 PYHVGSKFLLIGDAAHAMVPFY 312
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 4.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 122 VKWSKSWK*PNTQSI 166
+KW K K PNT+++
Sbjct: 286 MKWKKDNKLPNTKNV 300
>AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 212
Score = 20.6 bits (41), Expect = 6.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 187 PYHKMSKYTLRVGLLPAF*PFY 122
PYH SK+ L A PFY
Sbjct: 58 PYHVGSKFLLIGDAAHAMVPFY 79
>AY052623-1|AAL15471.1| 101|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 101
Score = 20.6 bits (41), Expect = 6.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 187 PYHKMSKYTLRVGLLPAF*PFY 122
PYH SK+ L A PFY
Sbjct: 73 PYHVGSKFLLIGDAAHAMVPFY 94
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 20.6 bits (41), Expect = 6.4
Identities = 6/25 (24%), Positives = 11/25 (44%)
Frame = -3
Query: 121 VERHRNVCQICQXXPTFLGRLAILG 47
+ H +C +C G + I+G
Sbjct: 517 IRSHDKLCDVCDSVNRIFGFIIIIG 541
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,171
Number of Sequences: 336
Number of extensions: 1773
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9279512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -