Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_L22
         (420 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical ...   127   3e-30
Z92790-2|CAB07224.2|  377|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z83221-5|CAB05706.2|  578|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical ...    27   7.2  
AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z72507-1|CAA96633.2|  172|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical...    26   9.5  

>AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical
           protein Y48B6A.2 protein.
          Length = 91

 Score =  127 bits (307), Expect = 3e-30
 Identities = 53/85 (62%), Positives = 69/85 (81%)
 Frame = +1

Query: 70  KRLXXLGKSGTRYGASLRKMVKKLEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVA 249
           K++  +GK GTRYGASLRKM KKLEV QH++YTCSFCGK+AMKR   GIW+C +C + VA
Sbjct: 6   KKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKCHKVVA 65

Query: 250 GGAWVFSTTAASSCRSAVRRLREVK 324
           GGA+V+ T  A++ RS +RRLR++K
Sbjct: 66  GGAYVYGTVTAATVRSTIRRLRDLK 90


>Z92790-2|CAB07224.2|  377|Caenorhabditis elegans Hypothetical
           protein H03G16.2 protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 13  VFLCQLLSRXGFPKWPNVPKRLXXLGKSGTRYGASLRKMVKKLEVTQHA 159
           ++ CQ++     PK  NV K +    K     G  L+KM KK EVT  A
Sbjct: 204 IYQCQMIPH--IPKLQNVTKSVCNSIKCDFDSGDCLKKMGKKWEVTSEA 250


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 151 QHAKYTCSFCGKDAMKRSCVGIWSCKRC 234
           ++ KY C+ C      R   G+WSCK C
Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254


>Z83221-5|CAB05706.2|  578|Caenorhabditis elegans Hypothetical
           protein C49A1.9 protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
 Frame = +1

Query: 121 RKMVKKLEVTQHAKYTCSFCGKDA----MKRSCVGIWSCKRCKRTV-AGGAWVFSTTAAS 285
           R+   +L++    ++T + C K A    MK S     S      TV +   W+F+TT   
Sbjct: 95  RESSTELKIAVKMEFTANTCSKTATANTMKNSVATDTSYLEYTMTVNSESQWIFTTTITL 154

Query: 286 SCRSAVRRLREVK*F 330
           +C    R  +  K F
Sbjct: 155 NCPVGYRLFKRPKGF 169


>AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical
           protein F16B4.2a protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 196 KRSCVGIWSCKRCKRTVAGGAWVFSTT 276
           K  C+  W+C  C +T+   +W F +T
Sbjct: 333 KEKCILDWTCSTCDKTIE--SWYFRST 357


>AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical
           protein F16B4.2b protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 196 KRSCVGIWSCKRCKRTVAGGAWVFSTT 276
           K  C+  W+C  C +T+   +W F +T
Sbjct: 338 KEKCILDWTCSTCDKTIE--SWYFRST 362


>Z72507-1|CAA96633.2|  172|Caenorhabditis elegans Hypothetical
           protein F17C11.1 protein.
          Length = 172

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 178 CGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRS 297
           CGK  + R+C  +    +C        W F+TTAA++  S
Sbjct: 69  CGKSPVNRNCTALVPDSKCV-----FKWAFATTAAATACS 103


>AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical
           protein Y38F1A.9 protein.
          Length = 108

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 94  SGTRYGASLRKMVKKLEVTQHAK 162
           +G RY + ++KMV K  VT H K
Sbjct: 45  TGDRYVSKIKKMVGKFTVTLHIK 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,992,621
Number of Sequences: 27780
Number of extensions: 160704
Number of successful extensions: 469
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)