Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_L20
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80437-7|AAB37622.2| 295|Caenorhabditis elegans Nudix family pr... 52 3e-09
Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical pr... 31 0.92
AF003139-3|ABJ99066.1| 152|Caenorhabditis elegans Hypothetical ... 30 1.6
Z49888-6|CAD44128.1| 428|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z49888-5|CAA90065.2| 409|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z47069-5|CAD44131.1| 428|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z47069-4|CAA87339.2| 409|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical p... 27 8.6
Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical p... 27 8.6
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 27 8.6
>U80437-7|AAB37622.2| 295|Caenorhabditis elegans Nudix family
protein 7 protein.
Length = 295
Score = 52.0 bits (119), Expect(2) = 3e-09
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Frame = +2
Query: 215 ILQKNPIRRHISLRITAIRETFEELGILLCSQQHKKQKDGLRADFISNIDVKTWQDRVSK 394
++ K + RI A+RE FEE G+L S ++ Q D S + D SK
Sbjct: 48 VVDKTDAKLGDEFRIAAVRELFEESGVL--STKNGWQTSANNPDMTS-LKADIVND-TSK 103
Query: 395 NPESLWNLCEDYKCYPDIWSLHYWSNWLTPATLPKRFNTAFFVTALXEKPELKNYSTEVA 574
+ +C D +L W ++TPA P+RF T F++ + ++P + ++E++
Sbjct: 104 FEQLSGTICAD--------NLIEWDTFITPANYPRRFLTKFYLMLVDDEPAIDLCTSEMS 155
Query: 575 FVKWSDPTXILNSSDVKLY---PPQTY 646
W +P ++ + Y PPQ Y
Sbjct: 156 EYNWIEPKECVDEAYAGKYALPPPQVY 182
Score = 26.6 bits (56), Expect(2) = 3e-09
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 47 KRTRTGRGAFPNSVVFPGGVTEDAD 121
KR T + PN++VFPGGV + D
Sbjct: 30 KRGTTAK-FMPNTMVFPGGVVDKTD 53
>Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical
protein F47A4.5 protein.
Length = 1071
Score = 30.7 bits (66), Expect = 0.92
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 5/124 (4%)
Frame = +2
Query: 86 VVFPGGVTEDADEDDRWLQLFSLFGYTNT-DLESLHHANGPITPILQKNPIRRHISLRIT 262
V P G +ED D+R FSLF T+ DL L H + + + ++R
Sbjct: 298 VFAPVGFSEDVSLDER---PFSLFRATDKKDLMDLLHLCDEKSFLFTSLDMS---TMRAD 351
Query: 263 AIRETFEELGILLCSQQHKKQKDGL----RADFISNIDVKTWQDRVSKNPESLWNLCEDY 430
+R EEL I + + H R DF S+ +KT + + L LC
Sbjct: 352 ILRSKIEELVIQIRLKPHYHMIHVAIATDRLDFFSDGMIKTMNETLEPFESQLRCLCHTE 411
Query: 431 KCYP 442
CYP
Sbjct: 412 NCYP 415
>AF003139-3|ABJ99066.1| 152|Caenorhabditis elegans Hypothetical
protein F53G12.9 protein.
Length = 152
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 359 IDVKTWQDRVSKNPESLWNLCEDYKCYPD--IWSLHYWSNWLTP 484
+D TW S+ + W L +D K D + L++W NW+ P
Sbjct: 102 LDELTWMLAYSRGQDFTW-LRDDRKIIEDFGLVQLYFWRNWIVP 144
>Z49888-6|CAD44128.1| 428|Caenorhabditis elegans Hypothetical
protein F47A4.1b protein.
Length = 428
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 464 WSNWLTPATLPKRFNTAFFVTALXEKP---ELKNYSTEVAFVKWSDP 595
WSNW +T P + F E E NY+ + F++W DP
Sbjct: 174 WSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEVFMRWGDP 220
>Z49888-5|CAA90065.2| 409|Caenorhabditis elegans Hypothetical
protein F47A4.1a protein.
Length = 409
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 464 WSNWLTPATLPKRFNTAFFVTALXEKP---ELKNYSTEVAFVKWSDP 595
WSNW +T P + F E E NY+ + F++W DP
Sbjct: 155 WSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEVFMRWGDP 201
>Z47069-5|CAD44131.1| 428|Caenorhabditis elegans Hypothetical
protein F47A4.1b protein.
Length = 428
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 464 WSNWLTPATLPKRFNTAFFVTALXEKP---ELKNYSTEVAFVKWSDP 595
WSNW +T P + F E E NY+ + F++W DP
Sbjct: 174 WSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEVFMRWGDP 220
>Z47069-4|CAA87339.2| 409|Caenorhabditis elegans Hypothetical
protein F47A4.1a protein.
Length = 409
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 464 WSNWLTPATLPKRFNTAFFVTALXEKP---ELKNYSTEVAFVKWSDP 595
WSNW +T P + F E E NY+ + F++W DP
Sbjct: 155 WSNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEVFMRWGDP 201
>Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 65 RGAFPNSVVFPGGVTEDADEDDRWLQLF 148
+GAF SVV P G+ D D W +F
Sbjct: 613 QGAFDGSVVGPAGIKADQMTDASWSYVF 640
>Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 65 RGAFPNSVVFPGGVTEDADEDDRWLQLF 148
+GAF SVV P G+ D D W +F
Sbjct: 613 QGAFDGSVVGPAGIKADQMTDASWSYVF 640
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 317 KKQKDGLRADFISNIDVKTWQDRVSKNPESL 409
KKQ++ L D S + + W+D++S+N + L
Sbjct: 375 KKQEEKLMEDMQSALTPEAWRDKMSENMKQL 405
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,625,042
Number of Sequences: 27780
Number of extensions: 300346
Number of successful extensions: 789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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