Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_L19
(720 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 5e-35
SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 76 3e-14
SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07) 64 8e-11
SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053) 60 2e-09
SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06) 57 1e-08
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) 52 4e-07
SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0) 51 8e-07
SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20) 46 3e-05
SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05) 45 7e-05
SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) 45 7e-05
SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038) 43 3e-04
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 38 0.011
SB_29143| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_1946| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_29258| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 35 0.058
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 34 0.10
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 34 0.13
SB_21653| Best HMM Match : LRR_1 (HMM E-Value=0.00021) 33 0.31
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06) 32 0.54
SB_39091| Best HMM Match : dsDNA_bind (HMM E-Value=2.3) 31 0.94
SB_5397| Best HMM Match : LRR_1 (HMM E-Value=1.9) 30 1.6
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_4285| Best HMM Match : DUF735 (HMM E-Value=2.4) 30 2.2
SB_46639| Best HMM Match : G_glu_transpept (HMM E-Value=0) 29 2.9
SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10) 29 3.8
SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08) 29 5.0
SB_8597| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 28 6.6
SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_41077| Best HMM Match : LRR_1 (HMM E-Value=1.8e-05) 28 6.6
SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_42286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0) 28 8.8
SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36) 28 8.8
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 144 bits (350), Expect = 5e-35
Identities = 80/173 (46%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Frame = +2
Query: 176 RGYKLPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHY 355
RG K+ IEN+GATLDQFDTIDFSDNDIRK++GFPLLKRLK ILLNNNR+ R+ E L
Sbjct: 517 RGCKISVIENMGATLDQFDTIDFSDNDIRKIEGFPLLKRLKTILLNNNRVCRVAEGLGEC 576
Query: 356 IPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLD 535
+PNLES+ILTNN + EL DL+PL ++ LR L + + K+ Y +
Sbjct: 577 LPNLESIILTNNAMQELKDLEPLESVKSLRYLRIQGHAQQRKSSEYFYCKLHKLSPYEIG 636
Query: 536 FRKIKQKERDEANALFKSRKGKEIQREI--AKKAKTFVPGGNMPDPKVTNLTP 688
+ I R E KG ++++ + K KTF PG N P +V P
Sbjct: 637 GKPINDNRRKEMQL-----KGCFLEKKAPPSSKPKTFTPGENPPAKRVEQKPP 684
>SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13)
Length = 335
Score = 75.8 bits (178), Expect = 3e-14
Identities = 47/140 (33%), Positives = 75/140 (53%)
Frame = +2
Query: 167 LDLRGYKLPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENL 346
L L + +IE L ++ +D S N+I ++G L +LK + L NNRI +I EN+
Sbjct: 70 LQLDNNIIEKIEGLDMLVN-LQWLDLSFNNIEVIEGLDKLTKLKDLTLYNNRITKI-ENM 127
Query: 347 EHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELR 526
+ + NL + NN++ +L ++ L LRTL+L NP + Y+ YV +P+L
Sbjct: 128 DS-LTNLHVFSIGNNSLKQLDNVIYLRRFKNLRTLNLSFNPFCEDSKYKEYVIAHLPDLV 186
Query: 527 LLDFRKIKQKERDEANALFK 586
LDFR I + R+ A +K
Sbjct: 187 YLDFRLIDETAREAATERYK 206
>SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07)
Length = 534
Score = 64.5 bits (150), Expect = 8e-11
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = +2
Query: 167 LDLRGYKLPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENL 346
L L+ L ++ENL LD DT++ S+N IR ++ L L + + +NR+ G+
Sbjct: 39 LYLQQNMLKKVENL-EELDGLDTLNVSNNIIRSIENIACLPVLNTLQIAHNRLASAGDIK 97
Query: 347 E-HYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANK-NHYRAYVAFKMPE 520
E L V L+ N I + +D L+ +P L L+L+ NPV K +YR + K+
Sbjct: 98 ELASCQKLSIVDLSYNKIDDPNIVDVLAEMPNLSVLNLIGNPVIKKIKNYRKNMILKLKN 157
Query: 521 LRLLDFRKIKQKER 562
L+ LD R + +ER
Sbjct: 158 LKYLDDRPVFPRER 171
>SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053)
Length = 377
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +2
Query: 302 ILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDL-DPLSTLPKLRTLSLMHNPVAN 478
+ L +N ++ + L H + LE ++L N +++L D+ L + +L L+L +NP+A
Sbjct: 170 VYLQDNMLIEVNGLLRH-LTCLEVLMLNGNQLTKLTDVVHELRAMQRLHDLNLFNNPLAQ 228
Query: 479 KNHYRAYVAFKMPELRLLDFRKIKQKERDEANALFKSRKGKEIQREIAKKAKTFVPGGNM 658
YR+YV ++ L++LD R++ Q ER K++K E RE+ K+ +F +
Sbjct: 229 DYDYRSYVIHRIKSLKILDRREVLQAER------IKAQKKYEPDREMVKETVSFGRRVDG 282
Query: 659 PDPKV 673
P KV
Sbjct: 283 PPQKV 287
>SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06)
Length = 192
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +2
Query: 359 PNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDF 538
PNL+ + L NNIS+L ++D L+ LP L T+SL NP+ + +H++ Y K+ L L F
Sbjct: 110 PNLKILCLQGNNISDLHEIDKLAALPNLHTISLQGNPIEDDDHFKCYTTSKL--LHLKKF 167
Query: 539 RKIKQKERDEA 571
++D+A
Sbjct: 168 NSAPLTKQDKA 178
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 56.4 bits (130), Expect = 2e-08
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
Frame = +2
Query: 167 LDLRGYKLPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENL 346
L L G ++ ++NL L + S++ +++L G LK + +N I +I ENL
Sbjct: 21 LTLIGQEIEVLQNLDC-LPHLTELCVSESSLKELSGIDKCTNLKKVYFYDNHISKI-ENL 78
Query: 347 EHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMH-----NPVANKNHYRAYVAFK 511
+ L + L NNNI + DL L LP L++LSL NPV+ +Y ++ F
Sbjct: 79 SS-LTRLTVLWLNNNNIQAIEDLTNLVHLPHLKSLSLKDPTYGPNPVSLLCNYATHLLFH 137
Query: 512 MPELRLLDFRKIKQKERDEANALFKSRK 595
+P+L LD + K E S+K
Sbjct: 138 LPKLTRLDSYDVDNKALKELAEATVSKK 165
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/67 (35%), Positives = 36/67 (53%)
Frame = +2
Query: 272 GFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTL 451
GF L+ + L N I + E L P L+ + L++NN++ L D L LP+LR L
Sbjct: 1067 GFESCSSLEELSLEGNCISKF-EGLVRN-PKLKWLNLSSNNLTIL-DTGMLERLPELRYL 1123
Query: 452 SLMHNPV 472
SL +N +
Sbjct: 1124 SLENNNI 1130
>SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08)
Length = 219
Score = 52.4 bits (120), Expect = 4e-07
Identities = 35/104 (33%), Positives = 54/104 (51%)
Frame = +2
Query: 266 LDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLR 445
L FP L L+ + L++NRI +NL P L + L+ N I +L L+PL L L+
Sbjct: 53 LKNFPKLPNLRKLELSDNRISSGLQNLTG-SPKLTHLSLSGNKIKDLETLEPLEKLSNLK 111
Query: 446 TLSLMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEANA 577
+L L + V N + Y+ V +P LR LD + E +E ++
Sbjct: 112 SLDLFNCEVTNVDDYKNKVFELIPSLRYLDGCDKEGNEAEETDS 155
>SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0)
Length = 480
Score = 51.2 bits (117), Expect = 8e-07
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Frame = +2
Query: 161 RXLDLRGYKLPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLN-----NNRI 325
R LDL + IENL + L + + + N I +++G L L + L +NRI
Sbjct: 334 RILDLSFNVIKVIENLNS-LTKLEKLYLVQNKIGRIEGLEHLTELTMVELGANKIRSNRI 392
Query: 326 VRIGENLEHYIPNLESVILTNNNISELG---------------DLDPLSTLPKLRTLSLM 460
V + + LEH + +LE + +++N I E+ DLD L+ PKL T+ L
Sbjct: 393 VEL-KGLEH-LESLEELYISHNGIEEIKGLESLFNDNQLKHWEDLDELAKCPKLHTVYLE 450
Query: 461 HNPVANKNHYRAYVAFKMPELRLLD 535
NP++ YR V +P L+ +D
Sbjct: 451 RNPLSRDTAYRRKVKLALPALKQID 475
>SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20)
Length = 681
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/104 (33%), Positives = 57/104 (54%)
Frame = +2
Query: 161 RXLDLRGYKLPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGE 340
R L+ + + I++L A L + +D DN I ++ G LK L+ ++L NRI +I
Sbjct: 166 RLLNFQHNLIRNIQHL-ANLRRLIFLDIYDNQIEEISGLSSLKSLRVLMLGKNRIRKI-N 223
Query: 341 NLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPV 472
NLE + L+ + L N IS+ ++ LS L +LR L+L N +
Sbjct: 224 NLE-ALTKLDVLDLHGNRISK---IENLSHLTELRVLNLAGNEI 263
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = +2
Query: 356 IPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLD 535
+ NL+ + L+ N IS D++ L+ + LSL NP A+ Y+ V + LR LD
Sbjct: 322 LSNLQRLFLSFNCISRFEDINCLTRSTSITELSLDGNPFASDVTYKQTVLKSVTCLRQLD 381
Query: 536 FRKIKQKERDEANALFKSRKGKEIQREIAKKA 631
++I ++ER A+ +RK +E ++E+ K A
Sbjct: 382 MKRITEEER--RIAMVMARKEEEKKKEVNKLA 411
>SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05)
Length = 252
Score = 44.8 bits (101), Expect = 7e-05
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 RLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNP 469
RLK + L+ N I + + +E + LE++ L NNIS L DL L L L+ L L NP
Sbjct: 49 RLKNLDLSRNAIQSL-QGVES-LQLLETLNLYYNNISYLQDLSALKYLTNLKELDLRLNP 106
Query: 470 VA-NKNHYRAYVAFKMPELRLL 532
V N+ YR Y+ +P L+ L
Sbjct: 107 VTKNEPDYRLYIVHLLPSLKRL 128
>SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16)
Length = 288
Score = 44.8 bits (101), Expect = 7e-05
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Frame = +2
Query: 236 IDFSDNDIRKLDGFPL-LKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGD 412
+D S N I+ + P L+ LK ++LN+N + + L+ + +E I N +S L +
Sbjct: 131 LDLSHNSIQFVSATPRDLRHLKSLILNHNNLQSLS-GLDCLVGLIELGI-AENRVSTLTE 188
Query: 413 LDPLSTLPKLRTLSLMHNPVANKNHYRAYV--AFKMPELRLLDFRKIKQKERDEANALFK 586
L+ + +LR LS+ NP+ + +YR + F ++ +LD + +ER N FK
Sbjct: 189 FSKLTCMSQLRYLSVNGNPLTRETYYRVKIFHYFNGKDI-VLDNKSKTVRERARLNQHFK 247
>SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038)
Length = 92
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +2
Query: 332 IGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFK 511
I N I LES + +N + DLD L+ PKL T+ L NP++ YR V
Sbjct: 21 ISHNGIEEIKGLES-LFNDNQLEHWEDLDELAKCPKLHTVYLERNPLSRDTAYRRKVKLA 79
Query: 512 MPELRLLD 535
+P L+ +D
Sbjct: 80 LPALKQID 87
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/98 (29%), Positives = 45/98 (45%)
Frame = +2
Query: 188 LPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNL 367
+ +I+NL + + DN+I K+ L + L NN+I RI E L+H L
Sbjct: 41 IDEIDNL-SMCKNLSVLYLYDNNISKIKNLGFAGNLTHLYLQNNKISRI-EGLDH-CRRL 97
Query: 368 ESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANK 481
+ L N+I+ + LD L L +L + H P K
Sbjct: 98 SKLYLGGNSITVIEGLDKLENLRELH-MEKQHLPPGEK 134
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 284 LKRLKCIL-LNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDP-LSTLPKLRTLSL 457
L + C+L ++ N I I E + N+ +N ++++ +L ++ P L L +
Sbjct: 145 LSKCLCVLNISENNIDSIDEL--QCLTNMTQFFTEHNLLADMKELSRVMAAWPYLWRLEV 202
Query: 458 MHNPVANKNHYRAYVAFKMPELRLLDFRKI 547
NP+ K YR + L +LD ++I
Sbjct: 203 SGNPLCQKKKYRDRIIVMSNSLVMLDGKEI 232
>SB_29143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 449 LSLMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEA 571
LS + + YR Y+ K+P+L+ LD R +K++ER EA
Sbjct: 11 LSFTDHDEEDYQRYRYYILHKLPKLKFLDSRTVKEQERQEA 51
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +2
Query: 293 LKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPV 472
LK + LNNN + RI + LE + L NNNI+EL D + P L+ L + N +
Sbjct: 190 LKSLQLNNNLLTRIEPGTFRNLRGLEILYLNNNNITEL-DQRLFTRTPSLKLLFVSFNSL 248
Query: 473 A 475
A
Sbjct: 249 A 249
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +2
Query: 161 RXLDLRGYKLPQI-ENLGATLDQFDTIDFSDNDIRKL--DGFPLLKRLKCILLNNNRIVR 331
R L+L +L + ++ L ++D S N + L D F L L+ + L+ NR+
Sbjct: 95 RSLNLGANRLSVLPRSVFRDLASLRSLDLSANRLSSLPEDTFEGLSSLQDLFLDFNRLRA 154
Query: 332 IGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 466
I E H + L+ + L NNN+ + TL L++L L +N
Sbjct: 155 IPETTFHGLAALQRLRLHNNNLKTFSERTLQGTL-SLKSLQLNNN 198
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 275 FPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISEL--GDLDPLSTLPKLRT 448
F L+ L+ + LNNN I + + L P+L+ + ++ N+++ L G LST K
Sbjct: 208 FRNLRGLEILYLNNNNITELDQRLFTRTPSLKLLFVSFNSLATLPRGLFYSLSTDAK--- 264
Query: 449 LSLMHNP 469
+SL +NP
Sbjct: 265 VSLHNNP 271
>SB_1946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 36.3 bits (80), Expect = 0.025
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Frame = +2
Query: 197 IENLGATLDQFDTIDFSDNDI----RKLDGFPLLKRLKCILLNNNRIVRIGENLEHY--- 355
++N+ +L + ID S N++ R F LK +K I L+ N++ G L
Sbjct: 462 LDNVVPSLKLLEHIDLSRNNLSNWTRMTSTFDGLKSIKHINLSANKMCDAGVGLLAKALV 521
Query: 356 -IPNLESVILTNNNISELGDL---DPLSTLPKLRTLSLMHNPVANK 481
+ NLE + L N I+ G + D LS L +L LSL N +ANK
Sbjct: 522 NLSNLEVLHLAWNEITCEGAILLADSLSGLTRLEALSLKSNKIANK 567
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 35.9 bits (79), Expect = 0.033
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 6/177 (3%)
Frame = +2
Query: 167 LDLRGYKLPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENL 346
L L + + +LG L + + LDG L L + L N I +
Sbjct: 738 LKLSNSIISTVRDLGTCLTNLRMLWMCRCSLSDLDGISSLSSLAELYLAFNDISDVSP-- 795
Query: 347 EHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELR 526
+ NL+ + L N + E+ ++ L+ L+ L+L NPV H A EL
Sbjct: 796 VSMLDNLQVLDLEGNLVDEIAQVEFLTLCSSLKCLNLEGNPVCTAPHPDA----SEEELA 851
Query: 527 LLDFRK-IKQ-----KERDEANALFKSRKGKEIQREIAKKAKTFVPGGNMPDPKVTN 679
D+RK + Q + D+ L + GK + R++ AK G +PD +T+
Sbjct: 852 SYDYRKAVHQAVPSLRFLDDEPFLVEKVDGKPVLRDMPDSAK----GVRIPDHLITD 904
>SB_29258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 35.5 bits (78), Expect = 0.044
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Frame = +2
Query: 218 LDQFDTIDFSDNDIRKLD-GFPLLKR---LKCILLNNNRIVRIGEN-LEHYIPNLESVIL 382
+ QF +D+ D D D G L R ++C+ L+N +I + YIPN+E + L
Sbjct: 271 IQQF-VVDYCDRDHEITDIGVTALARFCDIRCLHLSNGQISDNALLVIAEYIPNIEDLSL 329
Query: 383 TNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLDFR 541
+ +S++G + + KL +L ++HN ++ AF + DFR
Sbjct: 330 EFSQVSDVGIFKLMQSCRKLESL-VVHNSDNHERGITDASAFMIGHYACEDFR 381
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 35.1 bits (77), Expect = 0.058
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 25/162 (15%)
Frame = +2
Query: 197 IENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESV 376
+ NL + L +++++S N I +++ L L+ + L++N++ I NL + N+ +
Sbjct: 962 LSNLESLLPNIESLNWSHNCIEEINHLESLSELEVLDLSHNKLRAIPTNLNAKLGNIRKL 1021
Query: 377 ILTNNNISELGDLDPLSTL----------------------PKLRTLSLMHNPVANKNHY 490
L NN +S + L+ L +L P L L L NP+ ++ Y
Sbjct: 1022 NLANNQLSCVDGLEKLYSLVELDLRSNLLTEVSSVVLIGDLPCLENLHLEGNPLTKESSY 1081
Query: 491 RAYVAFKMPE---LRLLDFRKIKQKERDEANALFKSRKGKEI 607
R V E L LD + +E + + L + EI
Sbjct: 1082 RVRVLSGFGERARLVSLDGQPPSDREMKKVSELLSREQDFEI 1123
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 34.3 bits (75), Expect = 0.10
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 173 LRGYKLPQIENLGATLDQFDTIDFSDNDIRKLDGFPL--LKRLKCILLNNNRIVRIGENL 346
L+ K+ IEN GA +D S+N I ++D L L L +LLNNN++ +
Sbjct: 358 LKNNKIVAIEN-GAFPLNLRVMDLSNNKIGRIDKIVLKDLVNLNSLLLNNNQLTILPNGG 416
Query: 347 EHYIPNLESVILTNNNISEL 406
+ + ++ + L NN ++ +
Sbjct: 417 DFHNKQIDRLDLKNNRLTTI 436
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +2
Query: 269 DGFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRT 448
+G + L + L NN I I + + NL+S+ L +NNIS L + + LP L
Sbjct: 122 NGLQMFTNLINLTLENNSISAIAPHAFKGLDNLQSLNLRHNNIS-LWEGNISRDLPSLEI 180
Query: 449 LSLMHNPV 472
L L NPV
Sbjct: 181 LELDGNPV 188
>SB_21653| Best HMM Match : LRR_1 (HMM E-Value=0.00021)
Length = 198
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 167 LDLRGYKLPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGE 340
L L+ L ++ENL LD DT++ S+N IR ++ L L + + +NR+ G+
Sbjct: 131 LYLQQNMLKKMENL-EELDGLDTLNVSNNIIRSIENIACLPVLNTLQIAHNRLASAGD 187
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 167 LDLRGYKLPQIENLGATLDQFDTIDFSDNDIRKLDG-FPLLKRLKCILLNNNRIVRIGEN 343
L+L +L + + L++ + SDN+I L L+ L+ + L++NR++ + +
Sbjct: 172 LNLEANELKIVPEVVTKLEKLQVLILSDNEIGALPADLNALENLRELYLDDNRLMSLPKK 231
Query: 344 LEHYIPNLESVILTNN 391
L ++ L + + NN
Sbjct: 232 LHEFLTGLYILDINNN 247
>SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06)
Length = 632
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 362 NLESVILTNNNISEL-GDLDPLSTLPKLRTLSLMHNPVA 475
+L S+ L+ NN+ +L ++ L TLPKLR L + NP+A
Sbjct: 206 HLLSLDLSCNNLPDLYSTINTLKTLPKLRNLVMQGNPLA 244
>SB_39091| Best HMM Match : dsDNA_bind (HMM E-Value=2.3)
Length = 227
Score = 31.1 bits (67), Expect = 0.94
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 455 LMHNPVANKNHYRAYVAFKMPELRLLDFRKIKQKERDEANALFKSRKGKEIQREIAKKAK 634
L H+P NKN +A + +LR L K+ + + D + K + + +E A++
Sbjct: 133 LWHSPETNKNGLLRQIAEREDKLRKLKMVKMYRTKNDLTDLQKLIDKWRNVSQEAAERLL 192
Query: 635 TFVPGGNMPDPKVTNLTPQ 691
T + P PK+ L Q
Sbjct: 193 TKIK--KEPSPKMKELLDQ 209
>SB_5397| Best HMM Match : LRR_1 (HMM E-Value=1.9)
Length = 193
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 392 NISELGDLDPLST-LPKLRTLSLMHNPVANKNHYRAYVAFKMPELRLLD 535
+IS+L L+ L P LRTL L NP+ + + Y V P L LD
Sbjct: 131 DISKLSALEALQGGCPGLRTLDLRGNPICHSDTYPKDVIALFPNLTKLD 179
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 275 FPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNIS-ELGDLD-PLSTLPKLRT 448
F L LK + L NNRI I + + +LE + L+NN+IS + +++ P L L +
Sbjct: 152 FKHLLALKVLNLANNRIYHISQGSFSDLRSLEGLDLSNNDISWTVEEMNGPFRGLTNLAS 211
Query: 449 LSLMHNPV 472
L L N +
Sbjct: 212 LRLDGNRI 219
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 284 LKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISEL 406
L+ L+ + L N + + E L +PNL+ + L NN+I+E+
Sbjct: 39 LQHLEFLYLEGNYLTTLPETLFERLPNLKWLDLRNNHINEV 79
>SB_4285| Best HMM Match : DUF735 (HMM E-Value=2.4)
Length = 267
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +2
Query: 278 PLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSL 457
P+LK + + + +GE L+ I L++++ T + + ++ TL + S
Sbjct: 131 PVLKNARLVPVPQGGTENMGE-LD--IKVLQNLLSTTSESTSNPSMEGCITLETSLSRSA 187
Query: 458 MHNPVANKNHYRAYVAFKMPELRLLDFR--KIKQKERDE 568
A N Y+ Y AFKMP RL + I + E+D+
Sbjct: 188 SKKTEAEVNKYKQYHAFKMPITRLRSHQILAINRAEQDK 226
>SB_46639| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 566
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 167 LDLRGYKLPQIENLGATLDQFDTIDFSDNDIRKLD 271
LD + Q++ L T DQ D +DF+++ + KLD
Sbjct: 241 LDKLDFTEDQLDKLDFTEDQLDKLDFTEDKLGKLD 275
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 194 QIENLGATLDQFDTIDFSDNDIRKLD 271
Q++ L T DQ D +DF+++ + KLD
Sbjct: 240 QLDKLDFTEDQLDKLDFTEDQLDKLD 265
>SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10)
Length = 212
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 260 RKLDGFPLL--KRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTL 433
R+L FPL R +LLN+NR+ + + + N+ ++ L N I E+ + L
Sbjct: 100 RRLRNFPLPLPPRTSTLLLNDNRLSLLRYDFFLGLNNIRTLNLRRNGIKEI-EFGAFRNL 158
Query: 434 PKLRTLSLMHN 466
L +L L N
Sbjct: 159 TALESLYLFRN 169
>SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08)
Length = 537
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 362 NLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 466
NL ++IL+NN I + D + L LR LSL HN
Sbjct: 48 NLVTLILSNNEIIAI-DENAFQGLTSLRNLSLSHN 81
>SB_8597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +2
Query: 272 GFPLLKRLKCILLNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTL 451
G ++ R++ L I ++ E +E ++P+ S+I N+ L + ++ + KL T
Sbjct: 60 GSSIVTRMQATLCATRIIRKVPELMEIFVPSTRSLISERNHGVLLTGITLVTVMCKLNTE 119
Query: 452 SLMH 463
+L H
Sbjct: 120 TLQH 123
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +2
Query: 317 NRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 466
N+I ++ E+++ ++ NLE +IL+NN + +L + L KLR L + N
Sbjct: 735 NQISKLPEDIQ-WLVNLEVLILSNNLLKKLP--RGIGALRKLRVLDIEEN 781
>SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +2
Query: 167 LDLRGYKLPQIENLGATLDQFDTIDFSDNDIRKLDGFPLLKRLKCILLNNNRIVRIGE 340
LDL KL +++ L ++ ++N + L+GF L + + NN + + E
Sbjct: 54 LDLSNNKLVKLQLQDVFLPSLTKLNLANNQLATLEGFTAFPNLVDLNITNNPKIEVSE 111
>SB_41077| Best HMM Match : LRR_1 (HMM E-Value=1.8e-05)
Length = 1200
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 332 IGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHNPVANKNHYRA 496
+ E ++ L+ +IL NNI E G + L LP++ L L +N N +A
Sbjct: 818 VNEFCDNNSQKLKHLILPVNNIGERGCKELLGLLPQILVLDLGYNRRVNDECMKA 872
>SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +2
Query: 317 NRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 466
N+I ++ E+++ ++ NLE +IL+NN + +L + L KLR L + N
Sbjct: 310 NQISKLPEDIQ-WLVNLEVLILSNNLLKKLP--RGIGALRKLRVLDIEEN 356
>SB_42286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1820
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 488 NGFCWQLDCA*VIMFAALVMYLMDPNH--QVLRYCCLLKSQTLNLVYNVPNSLLSSRS 321
NGFCW C V F+ + + + P + V R ++K +++ + N + R+
Sbjct: 264 NGFCWSPSCLSVPYFSTALSWYLKPENIGHVRRLIEIIKQFRESILQTIANMRMGVRA 321
>SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2639
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Frame = -1
Query: 330 LTILLLFNRIHFN---LFSSGKPSSF 262
+T+LLLFN +H N L +SGKP +F
Sbjct: 1618 VTLLLLFNLVHTNERPLDNSGKPLTF 1643
>SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36)
Length = 852
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 308 LNNNRIVRIGENLEHYIPNLESVILTNNNISELGDLDPLSTLPKLRTLSLMHN 466
L+NNRI + + +L+++ L+ NNISE+ L + L +L L +N
Sbjct: 628 LSNNRITSVPVGMPCLATSLQTLNLSGNNISEVKTLAQFPS--SLSSLDLSNN 678
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,423,132
Number of Sequences: 59808
Number of extensions: 392527
Number of successful extensions: 1033
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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