Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_L18
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    27   0.20 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.8  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 318 IEDFVSETRQIFEELFPQSEILPGVKKLIYHLNQH 422
           ++DF     +  +E    + ILP VK+L+   NQH
Sbjct: 308 VKDFCQNLDKAHQESIIMNNILPCVKELVADPNQH 342


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 386 WCKETHLSSKSTQHSNG 436
           W KE   + KS+Q  NG
Sbjct: 117 WMKEKKTTRKSSQQENG 133


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 140  NMRNRQINHFISVLITELLYQF 75
            N+RN+ ++H    L + L Y+F
Sbjct: 1259 NLRNQNLSHQAKNLDSNLKYEF 1280


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 328 KSSIVRGKSRYFIMFPANSLVCCPII 251
           K S ++ K RYF    ++ L CC +I
Sbjct: 80  KDSDLQQKLRYFEEVFSSLLSCCSVI 105


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 328 KSSIVRGKSRYFIMFPANSLVCCPII 251
           K S ++ K RYF    ++ L CC +I
Sbjct: 80  KDSDLQQKLRYFEEVFSSLLSCCSVI 105


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 646 LMESSKTRHFSKSGLSRNLLAATINISGCG 557
           L+E  + +H  K+G S +LL    + SG G
Sbjct: 604 LLELERAQHEFKNGDSSSLLDKMRDSSGAG 633


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 109 IK*FICLFRMFYLIWTDYY 165
           +K  I +  +F++ WT YY
Sbjct: 274 LKMTIIIVLVFFVCWTPYY 292


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 109 IK*FICLFRMFYLIWTDYY 165
           +K  I +  +F++ WT YY
Sbjct: 274 LKMTIIIVLVFFVCWTPYY 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,322
Number of Sequences: 336
Number of extensions: 3327
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)