Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_L17
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78018-3|CAB01444.1| 820|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical p... 31 0.99
U23170-2|ABD63218.1| 150|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical... 29 2.3
AF038613-12|AAB92046.3| 328|Caenorhabditis elegans Hypothetical... 29 2.3
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 29 2.3
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 24 2.8
AL023828-22|CAA19467.2| 272|Caenorhabditis elegans Hypothetical... 29 3.0
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 28 6.9
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 28 6.9
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF022973-4|AAC25798.1| 314|Caenorhabditis elegans Temporarily a... 27 9.2
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 27 9.2
>Z78018-3|CAB01444.1| 820|Caenorhabditis elegans Hypothetical
protein W07G4.3 protein.
Length = 820
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 307 WCLASLRTMTFRARPPT-AKKGSASTITCATRPITP*SLTEQTSS 438
W L SL ++ PP K G+ +T ++RP+TP E+ S
Sbjct: 535 WALKSLSGKFYKGPPPAEVKPGAPATADTSSRPVTPNPTAEKEKS 579
>Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical
protein Y57G11C.5 protein.
Length = 512
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 590 GNAVRVPPAAALVHWQGLRPGRDGI 516
G + + PP A+L HW LR G +GI
Sbjct: 304 GQSQKAPPMASLWHWAHLRVGSEGI 328
>U23170-2|ABD63218.1| 150|Caenorhabditis elegans Hypothetical
protein F58F12.4 protein.
Length = 150
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +3
Query: 195 DTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGEC 374
++ DL + IN+ S +Q++ TQ + PST +P DL C + + C
Sbjct: 26 ESSDLANFINET-DSEMTSSQIESSTQIPSSTMNPSTKLPSSMRGKDLHCPSIENAVSSC 84
Query: 375 ------VNYYLCNAAN 404
V Y C AN
Sbjct: 85 PKDSKWVYYTCCGGAN 100
>AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical
protein Y73F8A.20 protein.
Length = 541
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 590 GNAVRVPPAAALVHWQGLRPGRDGI 516
G + + PP A+L HW L+ G GI
Sbjct: 329 GQSQKAPPMASLWHWASLKVGSSGI 353
>AF038613-12|AAB92046.3| 328|Caenorhabditis elegans Hypothetical
protein F42A6.1 protein.
Length = 328
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 193 MFCAHADARKPMSRSLYIFGYYSQNITLTISNSQCS 86
++C +DAR R + S +TLT+S S+C+
Sbjct: 25 LWCILSDARNRNRREFLLVASQSVTVTLTVSTSECA 60
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 343 ARPPTAKKGSASTITCATRPITP*SLTEQTSSI*ESAVARVHRTSTSAVWLPTRDRQQIP 522
ARP T+ G A+ +R P + + + SA + V R T A + + R + P
Sbjct: 355 ARPQTSS-GIAAPGAPRSRIAMPTTSSSSLARRPGSASSSVPRVPTGAASMTSSSRIRPP 413
Query: 523 SRPGRRP 543
SRPG RP
Sbjct: 414 SRPGSRP 420
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +3
Query: 411 IITDGTNVIDIRVG--SGPCSSYIDVCCLAPDQRPPTDPITPRPETLPMN 554
++ D ++ +R S P SS + P + DP+ P+ +P N
Sbjct: 449 VVDDDMGIVTMREAPPSRPASSRASRTEIPPKEESKVDPMKPKQAHVPQN 498
Score = 23.4 bits (48), Expect(2) = 2.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 210 ESIINQIFTSAKPPTQLQPVTQPSVADR 293
ES+ Q + S +PP+ QP +PS + R
Sbjct: 419 ESVPTQSY-SERPPSSQQPSPRPSASPR 445
>AL023828-22|CAA19467.2| 272|Caenorhabditis elegans Hypothetical
protein Y17G7B.19 protein.
Length = 272
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 390 CNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRP 509
C + ++I + G ++ + GPCS++ID C PD+ P
Sbjct: 101 CYSKKSSICSTGGTPFEVELSDGPCSNHID-C--NPDELP 137
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +1
Query: 319 SLRTMTFRARPPTAKKGSASTITCATRPITP*SLTEQTSSI*ESAVARVHRTST 480
S T T + P T+ S ST T +T T + T TSS SA R RTST
Sbjct: 523 SSTTSTEASTPTTSTSTSTSTSTPSTTTST--TSTSTTSSTSSSAPIRAVRTST 574
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +3
Query: 234 TSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQ--TSDGQEGE 371
T+ P T L+P T P D P ST ++ Q T+ Q+ E
Sbjct: 221 TTTTPTTTLKPTTSPQKPDSTEEATSPSQSTTTPVATQNPTTSNQKNE 268
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 234 TSAKPPTQLQPVTQPSVADRAPSTLVPGVS 323
T +KP T P +QP +A S +P +S
Sbjct: 500 TESKPSTPAAPSSQPKIASTPKSEAIPKIS 529
>AF022973-4|AAC25798.1| 314|Caenorhabditis elegans Temporarily
assigned gene nameprotein 57 protein.
Length = 314
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 41 TLSRTRKILKPVTSRRA-LRVRYC*CDVLRIISKDVQASTHRLSRVGVRAEHGHRGSGVD 217
T S+ K K + ++ + + VRY CD R+ +D + H L+ V + + G D
Sbjct: 86 TKSKLVKTKKQILNKYSDIEVRYAICDFTRVSYEDYKRLLHSLNEVDIGILINNVGMCFD 145
Query: 218 H*SDLH 235
+ LH
Sbjct: 146 NPEVLH 151
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 352 PTAKKGSASTITCATRPITP*SLTEQTSSI*ESAVARVHRTSTS 483
P AKK SA + +P LT++TS + +S+ +TST+
Sbjct: 1289 PVAKKSSAGSAGAGAKP-----LTKKTSDVGKSSAPNARKTSTA 1327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,548,390
Number of Sequences: 27780
Number of extensions: 298299
Number of successful extensions: 1095
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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