Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_L13
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 236 1e-62
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 180 7e-46
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 126 2e-29
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 110 1e-24
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 60 2e-09
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 36 0.022
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 36 0.022
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 3.4
Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical p... 28 7.8
AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical... 28 7.8
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 236 bits (578), Expect = 1e-62
Identities = 113/211 (53%), Positives = 142/211 (67%)
Frame = +3
Query: 93 IASAVSTPXGSFRGXXXXXXXXXXXXXXXNAAIERAGIPKEEIKEVYIGNVCSANLGQAP 272
I A TP GSFR AA+ER + I+EV++G VC AN GQAP
Sbjct: 26 IVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQVCQANAGQAP 85
Query: 273 ARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYL 452
ARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGMESMS VPFY+
Sbjct: 86 ARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGMESMSQVPFYV 145
Query: 453 KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNSYKRSA 632
+RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ IT +DQDEYA+NSYK+SA
Sbjct: 146 QRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDEYAINSYKKSA 205
Query: 633 AAYEAKAFVDELVPVPVPQKRGAPVIFAEXE 725
A+E E+VPV V K+G ++ + E
Sbjct: 206 KAWENGNIGPEVVPVNVKSKKGVTIVDKDEE 236
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 180 bits (439), Expect = 7e-46
Identities = 95/213 (44%), Positives = 127/213 (59%)
Frame = +3
Query: 87 VVIASAVSTPXGSFRGXXXXXXXXXXXXXXXNAAIERAGIPKEEIKEVYIGNVCSANLGQ 266
V I S TP G++RG AAIER+G+ E+I+EV G V A LGQ
Sbjct: 6 VFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLPAGLGQ 65
Query: 267 APARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPF 446
RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+MS VPF
Sbjct: 66 NVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENMSQVPF 125
Query: 447 YLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNSYKR 626
Y+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K IT ++QD YA+ SYK+
Sbjct: 126 YVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAIESYKK 185
Query: 627 SAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXE 725
++ A+ ++ F +E+VPV V R VI + E
Sbjct: 186 ASNAWSSEKFSEEVVPVSVKTSRSEVVITEDEE 218
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 126 bits (304), Expect = 2e-29
Identities = 71/149 (47%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Frame = +3
Query: 93 IASAVSTPXGSFRGXXXXXXXXXXXXXXXNAAIERAGIPKEEIKE--VYIGNVCSANLGQ 266
I A TP GSFR AA+ER + I+E V++G VC AN GQ
Sbjct: 104 IVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEANVFLGQVCHANAGQ 163
Query: 267 APARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPF 446
A ARQA + AGL S TTVNK +SGMK+I+LAAQ +QTG QD+ + GGMESMS VPF
Sbjct: 164 ASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQVPF 223
Query: 447 YLKRGETSYGGMQLVDGIVFDGLTDVYNK 533
+L R E S Q V+ V DG++D ++K
Sbjct: 224 FLARVEQSSNKYQ-VEQTVQDGISDFFDK 251
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 110 bits (264), Expect = 1e-24
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 3/207 (1%)
Frame = +3
Query: 87 VVIASAVSTPXGSFRGXXXXXXXXXXXXXXXNAAIERAGIPKEEIKEVYIGNV-CSANLG 263
V I A T G+F G AA++ A + + + V GNV S+ G
Sbjct: 6 VFIVGAKRTAFGTFGGKLKGLSATDLGVVASQAALKHANVGADAVDHVIFGNVVASSRDG 65
Query: 264 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 443
+R + +G+P++ TVN++C SG ++++ AAQ ++ G +I+LAGG E+MS VP
Sbjct: 66 IYLSRHIGLKSGVPQNVGALTVNRLCGSGFQAVVNAAQAIKLGESNIVLAGGTENMSMVP 125
Query: 444 FYLK--RGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQDEYAVNS 617
F ++ R T+ G + +++D L+D Y K MG AE + ++T Q+ DE+A+ S
Sbjct: 126 FAVRDIRFGTALGKKYEFEDMLWDSLSDPYAKLAMGQTAEKLGAQYKVTRQEADEFALRS 185
Query: 618 YKRSAAAYEAKAFVDELVPVPVPQKRG 698
A EA + +E+V + + ++G
Sbjct: 186 QTLWKKAQEAGVYKNEIVGITIKGRKG 212
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 59.7 bits (138), Expect = 2e-09
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 18/227 (7%)
Frame = +3
Query: 69 KVSLNAVVIASAVSTPXGSFRGXXXXXXXXXXXXXXXNAAIERAGIPKEEIKEVYIGNVC 248
K ++ +V+ AV TP A +E+ +P E++ + G V
Sbjct: 20 KKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVI 79
Query: 249 SANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMES 428
AR+A + AG+P TV C S ++ L TG + I+AGG+E
Sbjct: 80 QECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVEL 139
Query: 429 MSNVPF-YLKRGETSYGGM--------------QLVDGIV---FDGLTDVYNKFHMGNCA 554
+S+VP Y + + GM Q+V ++ + + MG+
Sbjct: 140 LSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSG 199
Query: 555 ENTAKKLQITXQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKR 695
+ A ++ ++QDE+A+ S+ ++ A + F D +VPV + K+
Sbjct: 200 DRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK 245
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3
Query: 186 AIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIM 365
A++ + +I++ +G + A V G+P VN CASG +
Sbjct: 40 ALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSSGLF 95
Query: 366 LAAQGLQTGAQDIILAGGMESMS 434
L Q +++G D++L G E M+
Sbjct: 96 LGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3
Query: 186 AIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIM 365
A++ + +I++ +G + A V G+P VN CASG +
Sbjct: 40 ALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSSGLF 95
Query: 366 LAAQGLQTGAQDIILAGGMESMS 434
L Q +++G D++L G E M+
Sbjct: 96 LGKQIIESGNSDVVLCAGFERMA 118
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +2
Query: 245 LFCKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 400
L C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 401 YN 406
YN
Sbjct: 242 YN 243
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 281 SCNICRFAKKYHMYNCKQSMCLWHEI 358
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical
protein B0331.2 protein.
Length = 523
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 364 IIDFMPEAHTLFTVVHMVLFGKPANITACLAGA 266
I F E T FTV+ V FG P + T C GA
Sbjct: 443 ISGFCIEVGTAFTVLICVKFGIPISSTHCTVGA 475
>Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 589 CXVICNFFAVFS 554
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
>AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 589 CXVICNFFAVFS 554
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,827,278
Number of Sequences: 27780
Number of extensions: 310263
Number of successful extensions: 919
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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