Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_L12
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 409 e-114
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 408 e-114
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 408 e-114
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 408 e-114
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 408 e-114
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 408 e-114
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 408 e-114
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 407 e-114
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 397 e-111
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 388 e-108
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 365 e-101
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 251 3e-67
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 215 2e-56
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 163 1e-40
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 131 4e-31
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 131 4e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 131 4e-31
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 126 2e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 118 5e-27
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 58 4e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.41
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.54
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.54
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 409 bits (1006), Expect = e-114
Identities = 196/217 (90%), Positives = 199/217 (91%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 365
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 366 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 545
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 546 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 656
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 408 bits (1005), Expect = e-114
Identities = 195/217 (89%), Positives = 199/217 (91%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 365
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 366 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 545
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 546 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 656
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 408 bits (1005), Expect = e-114
Identities = 195/217 (89%), Positives = 199/217 (91%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 365
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 366 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 545
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 546 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 656
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 408 bits (1005), Expect = e-114
Identities = 195/217 (89%), Positives = 199/217 (91%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 365
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 366 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 545
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 546 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 656
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 408 bits (1005), Expect = e-114
Identities = 195/217 (89%), Positives = 199/217 (91%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 365
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 366 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 545
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 546 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 656
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 408 bits (1005), Expect = e-114
Identities = 195/217 (89%), Positives = 199/217 (91%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 365
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 366 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 545
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 546 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 656
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 408 bits (1005), Expect = e-114
Identities = 195/217 (89%), Positives = 199/217 (91%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 365
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 366 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 545
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 546 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 656
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 407 bits (1002), Expect = e-114
Identities = 194/217 (89%), Positives = 199/217 (91%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAAL++ NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 365
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 366 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 545
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 546 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 656
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 397 bits (977), Expect = e-111
Identities = 187/216 (86%), Positives = 196/216 (90%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
+AALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 5 IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 186 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 365
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMF 124
Query: 366 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 545
ETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRD
Sbjct: 125 ETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRD 184
Query: 546 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 653
LTDY+MKILTERGY+FTTTAEREIVRDIKEKL YVA
Sbjct: 185 LTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVA 220
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 388 bits (955), Expect = e-108
Identities = 182/189 (96%), Positives = 186/189 (98%)
Frame = +3
Query: 90 SIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYN 269
SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYN
Sbjct: 20 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 79
Query: 270 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 449
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+V
Sbjct: 80 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVV 139
Query: 450 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 629
LDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 140 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 199
Query: 630 KEKLXYVAL 656
KEKL YVAL
Sbjct: 200 KEKLCYVAL 208
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 365 bits (897), Expect = e-101
Identities = 171/178 (96%), Positives = 175/178 (98%)
Frame = +3
Query: 123 MVGMGQXXSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 302
MVGMGQ SYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 303 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 482
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 483 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 656
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 178
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 251 bits (615), Expect = 3e-67
Identities = 114/215 (53%), Positives = 155/215 (72%), Gaps = 1/215 (0%)
Frame = +3
Query: 15 LVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGILTL 194
+V+ NGSG+ K + VGRP++ VM G ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 195 KYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 371
+YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 372 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 551
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVT 190
Query: 552 DYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 656
+YL +L GY F + E EIVR++KE Y+AL
Sbjct: 191 EYLRVLLRREGYEFHRSNEFEIVREMKENACYLAL 225
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 215 bits (525), Expect = 2e-56
Identities = 106/216 (49%), Positives = 144/216 (66%), Gaps = 3/216 (1%)
Frame = +3
Query: 15 LVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVM-VGMGQXXSY-VGDEAQSKRGIL 188
+VV NG+G K S+VGRP + VG + VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 189 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 365
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 366 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 545
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD 188
Query: 546 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 653
+T YL+K+L +RGY+F +A+ E VR +KEKL Y+A
Sbjct: 189 ITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIA 224
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 163 bits (395), Expect = 1e-40
Identities = 79/186 (42%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
Frame = +3
Query: 120 VMVGMGQXXSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 296
V G+ ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 297 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVL 452
LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVI 175
Query: 453 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 632
DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IK
Sbjct: 176 DSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIK 235
Query: 633 EKLXYV 650
EK YV
Sbjct: 236 EKFCYV 241
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 131 bits (317), Expect = 4e-31
Identities = 63/81 (77%), Positives = 64/81 (79%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKI 248
LTLKYPIEHGI+TNWDDMEKI
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 131 bits (317), Expect = 4e-31
Identities = 63/81 (77%), Positives = 64/81 (79%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKI 248
LTLKYPIEHGI+TNWDDMEKI
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 131 bits (317), Expect = 4e-31
Identities = 63/81 (77%), Positives = 64/81 (79%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDMEKI 248
LTLKYPIEHGI+TNWDDMEKI
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 126 bits (303), Expect = 2e-29
Identities = 60/78 (76%), Positives = 61/78 (78%)
Frame = +3
Query: 6 VAALVVXNGSGMCKXXXXXXXXXXXXXXSIVGRPRHQGVMVGMGQXXSYVGDEAQSKRGI 185
VAALVV NGSGMCK SIVGRPRHQGVMVGMGQ SYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 186 LTLKYPIEHGIITNWDDM 239
LTLKYPIEHGI+TNWDDM
Sbjct: 66 LTLKYPIEHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 118 bits (283), Expect = 5e-27
Identities = 52/126 (41%), Positives = 85/126 (67%)
Frame = +3
Query: 204 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 383
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 384 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 563
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 564 KILTER 581
++L ++
Sbjct: 214 QMLDQQ 219
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 58.4 bits (135), Expect = 4e-09
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 4/169 (2%)
Frame = +3
Query: 159 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 338
+E K + ++ PIE G + NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 339 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYAL 506
+ ++I+F+ F ++ + L S + +V+DSG + G +
Sbjct: 107 PDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLI 166
Query: 507 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 653
+++R+D+ G+ LT+ L ++ R + E ++ + KE L +V+
Sbjct: 167 QDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVS 213
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 58.4 bits (135), Expect = 4e-09
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 4/169 (2%)
Frame = +3
Query: 159 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 338
+E K + ++ PIE G + NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 339 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYAL 506
+ ++I+F+ F ++ + L S + +V+DSG + G +
Sbjct: 107 PDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLI 166
Query: 507 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 653
+++R+D+ G+ LT+ L ++ R + E ++ + KE L +V+
Sbjct: 167 QDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVS 213
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Frame = +3
Query: 270 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 449
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 450 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 620
+D G+ V + VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 621 RDIKEKLXYV 650
R E+ YV
Sbjct: 385 RFALEQTTYV 394
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 469 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 374
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.54
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 156 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 335
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 336 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 488
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 614 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 480
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,514,040
Number of Sequences: 27780
Number of extensions: 211483
Number of successful extensions: 812
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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