Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_L10
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457171-1|CAG33452.1|  194|Homo sapiens CGI-116 protein.              74   6e-13
BC010889-1|AAH10889.1|  194|Homo sapiens coiled-coil domain cont...    74   6e-13
AK223339-1|BAD97059.1|  194|Homo sapiens CGI-116 protein variant...    74   6e-13
AF155655-1|AAF67012.1|  194|Homo sapiens protein x 0009 protein.       74   6e-13
AF151874-1|AAD34111.1|  194|Homo sapiens CGI-116 protein protein.      74   6e-13

>CR457171-1|CAG33452.1|  194|Homo sapiens CGI-116 protein.
          Length = 194

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = +1

Query: 406 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLEKVNAAMVLLESKL 585
           DLTKV A+ QKRT+AF+N F+   VQFLN F   CE+KL     +++++   + +L++KL
Sbjct: 14  DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73

Query: 586 SSIPELD 606
           SSIP LD
Sbjct: 74  SSIPGLD 80


>BC010889-1|AAH10889.1|  194|Homo sapiens coiled-coil domain
           containing 53 protein.
          Length = 194

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = +1

Query: 406 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLEKVNAAMVLLESKL 585
           DLTKV A+ QKRT+AF+N F+   VQFLN F   CE+KL     +++++   + +L++KL
Sbjct: 14  DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73

Query: 586 SSIPELD 606
           SSIP LD
Sbjct: 74  SSIPGLD 80


>AK223339-1|BAD97059.1|  194|Homo sapiens CGI-116 protein variant
           protein.
          Length = 194

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = +1

Query: 406 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLEKVNAAMVLLESKL 585
           DLTKV A+ QKRT+AF+N F+   VQFLN F   CE+KL     +++++   + +L++KL
Sbjct: 14  DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73

Query: 586 SSIPELD 606
           SSIP LD
Sbjct: 74  SSIPGLD 80


>AF155655-1|AAF67012.1|  194|Homo sapiens protein x 0009 protein.
          Length = 194

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = +1

Query: 406 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLEKVNAAMVLLESKL 585
           DLTKV A+ QKRT+AF+N F+   VQFLN F   CE+KL     +++++   + +L++KL
Sbjct: 14  DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73

Query: 586 SSIPELD 606
           SSIP LD
Sbjct: 74  SSIPGLD 80


>AF151874-1|AAD34111.1|  194|Homo sapiens CGI-116 protein protein.
          Length = 194

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = +1

Query: 406 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLEKVNAAMVLLESKL 585
           DLTKV A+ QKRT+AF+N F+   VQFLN F   CE+KL     +++++   + +L++KL
Sbjct: 14  DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73

Query: 586 SSIPELD 606
           SSIP LD
Sbjct: 74  SSIPGLD 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,966,954
Number of Sequences: 237096
Number of extensions: 1286282
Number of successful extensions: 2044
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)