Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_L09
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 421 e-118
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 421 e-118
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 421 e-118
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 421 e-118
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 421 e-118
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 421 e-118
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 421 e-118
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 420 e-118
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 408 e-114
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 390 e-109
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 338 2e-93
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 259 2e-69
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 223 7e-59
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 176 1e-44
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 176 1e-44
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 176 1e-44
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 170 7e-43
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 167 7e-42
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 123 1e-28
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 66 3e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.45
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.60
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 3.2
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.3
AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical ... 28 7.3
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 9.7
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 9.7
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 9.7
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 9.7
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 9.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 421 bits (1038), Expect = e-118
Identities = 196/204 (96%), Positives = 200/204 (98%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 620 LAGRDLTDYLMKILTERGYSFTTT 691
LAGRDLTDYLMKILTERGYSFTTT
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTT 204
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 421 bits (1037), Expect = e-118
Identities = 195/204 (95%), Positives = 200/204 (98%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 620 LAGRDLTDYLMKILTERGYSFTTT 691
LAGRDLTDYLMKILTERGYSFTTT
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTT 204
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 421 bits (1037), Expect = e-118
Identities = 195/204 (95%), Positives = 200/204 (98%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 620 LAGRDLTDYLMKILTERGYSFTTT 691
LAGRDLTDYLMKILTERGYSFTTT
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTT 204
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 421 bits (1037), Expect = e-118
Identities = 195/204 (95%), Positives = 200/204 (98%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 620 LAGRDLTDYLMKILTERGYSFTTT 691
LAGRDLTDYLMKILTERGYSFTTT
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTT 204
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 421 bits (1037), Expect = e-118
Identities = 195/204 (95%), Positives = 200/204 (98%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 620 LAGRDLTDYLMKILTERGYSFTTT 691
LAGRDLTDYLMKILTERGYSFTTT
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTT 204
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 421 bits (1037), Expect = e-118
Identities = 195/204 (95%), Positives = 200/204 (98%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 620 LAGRDLTDYLMKILTERGYSFTTT 691
LAGRDLTDYLMKILTERGYSFTTT
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTT 204
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 421 bits (1037), Expect = e-118
Identities = 195/204 (95%), Positives = 200/204 (98%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 620 LAGRDLTDYLMKILTERGYSFTTT 691
LAGRDLTDYLMKILTERGYSFTTT
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTT 204
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 420 bits (1034), Expect = e-118
Identities = 194/204 (95%), Positives = 200/204 (98%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAAL++DNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 620 LAGRDLTDYLMKILTERGYSFTTT 691
LAGRDLTDYLMKILTERGYSFTTT
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTT 204
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 408 bits (1004), Expect = e-114
Identities = 187/199 (93%), Positives = 196/199 (98%)
Frame = +2
Query: 95 VAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 274
+AALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 5 IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 275 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 454
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMF 124
Query: 455 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 634
ETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRD
Sbjct: 125 ETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRD 184
Query: 635 LTDYLMKILTERGYSFTTT 691
LTDY+MKILTERGY+FTTT
Sbjct: 185 LTDYMMKILTERGYTFTTT 203
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 390 bits (959), Expect = e-109
Identities = 180/186 (96%), Positives = 185/186 (99%)
Frame = +2
Query: 134 KAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 313
+AGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 314 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 493
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 494 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 673
AVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 184
Query: 674 YSFTTT 691
YSFTTT
Sbjct: 185 YSFTTT 190
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 338 bits (831), Expect = 2e-93
Identities = 156/160 (97%), Positives = 160/160 (100%)
Frame = +2
Query: 212 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 391
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 392 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 571
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 572 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 691
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 160
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 259 bits (634), Expect = 2e-69
Identities = 113/194 (58%), Positives = 151/194 (77%), Gaps = 1/194 (0%)
Frame = +2
Query: 104 LVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 283
+V+DNGSG+ KAGFAG P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 284 KYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 460
+YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 461 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 640
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVT 190
Query: 641 DYLMKILTERGYSF 682
+YL +L GY F
Sbjct: 191 EYLRVLLRREGYEF 204
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 223 bits (546), Expect = 7e-59
Identities = 105/196 (53%), Positives = 142/196 (72%), Gaps = 3/196 (1%)
Frame = +2
Query: 104 LVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 277
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 278 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 454
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 455 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 634
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD 188
Query: 635 LTDYLMKILTERGYSF 682
+T YL+K+L +RGY+F
Sbjct: 189 ITKYLIKLLLQRGYNF 204
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 176 bits (428), Expect = 1e-44
Identities = 80/86 (93%), Positives = 82/86 (95%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKI 337
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 176 bits (428), Expect = 1e-44
Identities = 80/86 (93%), Positives = 82/86 (95%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKI 337
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 176 bits (428), Expect = 1e-44
Identities = 80/86 (93%), Positives = 82/86 (95%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKI 337
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 170 bits (414), Expect = 7e-43
Identities = 77/83 (92%), Positives = 79/83 (95%)
Frame = +2
Query: 80 LCXXSVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDM 328
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 167 bits (406), Expect = 7e-42
Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 21/214 (9%)
Frame = +2
Query: 101 ALVVDNGSGMCKAGFAGXDAPRAVFPSI------VGRPRHQG------VMVGMGQKDSYV 244
A V+DNG+G K G+AG P+ + PS V Q V G+ D ++
Sbjct: 8 ACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFI 67
Query: 245 GDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 421
GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 68 GDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTP 127
Query: 422 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 577
NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+
Sbjct: 128 ENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPV 187
Query: 578 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 679
+GY + I + +AGRD+T ++ +L +R ++
Sbjct: 188 ADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHT 221
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 123 bits (297), Expect = 1e-28
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 17/209 (8%)
Frame = +2
Query: 95 VAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QSKR 268
V+ LV D GS + GFAG + P+ PS + Q+ GD + Q+KR
Sbjct: 11 VSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTKR 70
Query: 269 ------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 403
G + P ++ G+I +W+ EKI H++ N L P EHPVL +E
Sbjct: 71 EKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSE 130
Query: 404 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 583
+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++
Sbjct: 131 SSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFD 190
Query: 584 GYALPHAILRLDLAGRDLTDYLMKILTER 670
GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 191 GYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 65.7 bits (153), Expect = 3e-11
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Frame = +2
Query: 92 SVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 271
S+ ++ DNG K G ++PR V SIV + +H+ V + + +E K
Sbjct: 2 SLTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFS 56
Query: 272 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 451
+ ++ PIE G + NWD ++IW TF + V + LT+ A + ++I+
Sbjct: 57 LFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEIL 114
Query: 452 FETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
F+ F ++ + L S + +V+DSG + G + +++R+D
Sbjct: 115 FDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRID 174
Query: 620 LAGRDLTDYL 649
+ G+ LT+ L
Sbjct: 175 VGGKALTNKL 184
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 65.7 bits (153), Expect = 3e-11
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Frame = +2
Query: 92 SVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 271
S+ ++ DNG K G ++PR V SIV + +H+ V + + +E K
Sbjct: 2 SLTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFS 56
Query: 272 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 451
+ ++ PIE G + NWD ++IW TF + V + LT+ A + ++I+
Sbjct: 57 LFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEIL 114
Query: 452 FETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
F+ F ++ + L S + +V+DSG + G + +++R+D
Sbjct: 115 FDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRID 174
Query: 620 LAGRDLTDYL 649
+ G+ LT+ L
Sbjct: 175 VGGKALTNKL 184
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 54.0 bits (124), Expect = 1e-07
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Frame = +2
Query: 104 LVVDNGSGMCKAGFAGXDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 277
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 278 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 457
+E I D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 458 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 637
+ + Q L LYA TTG+V+D G+ V + VP+ +GY + AI + + +
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQM 357
Query: 638 TDYLMKILT 664
D L L+
Sbjct: 358 GDSLRASLS 366
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 558 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 463
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.60
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +2
Query: 245 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 424
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 425 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 577
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 225 PIPTITPWWRGRPTMDGKTARGASXPAKPALHMPEPL 115
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 134 KAGFAGXDAPRAVFPSIVGRPRHQG 208
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical
protein C30F12.1 protein.
Length = 360
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 5 RPMTRSLAAVSSIPASPTQTHTKFNLCXXSVAALVVDNGS 124
RP+ +S++ +S PA+ + T +K+N S+ A+VVD +
Sbjct: 196 RPIRQSVSIATSSPATSSSTPSKYN-PDPSLRAVVVDGSN 234
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 275 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 192
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 275 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 192
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 275 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 192
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 275 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 192
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 275 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 192
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,706,184
Number of Sequences: 27780
Number of extensions: 305041
Number of successful extensions: 1378
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -