Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_L08
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    49   2e-07
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              28   0.26 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    27   0.80 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   1.1  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   1.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   3.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 48.8 bits (111), Expect = 2e-07
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +1

Query: 496 PSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTG-NTGINFSKYEDIPVEAXGDRVPXC 672
           PS D  + ++ K    +  PLP ++  E L+FG+G ++GINF K+E+I V   G+  P  
Sbjct: 117 PSMD--QVKTDKPRELYIPPLPTED--ESLIFGSGISSGINFDKFEEIQVRVSGENPPDH 172

Query: 673 ITSFEDVNLTXLMRTNISLARY 738
           + SFE   L   + TN+  + Y
Sbjct: 173 VESFERSGLREEVMTNVRKSSY 194


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 28.3 bits (60), Expect = 0.26
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 235 KSTGRYIPPHLRRQLQATSDQ 297
           + TGRY PP +R+QLQ    Q
Sbjct: 334 QQTGRYQPPQMRQQLQQQQQQ 354


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 16/50 (32%), Positives = 19/50 (38%)
 Frame = +1

Query: 424  PPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDER 573
            PP P   R   P PR  E    R     ++  R R+D     VP  R  R
Sbjct: 1107 PPIPPRSRRLPPSPRTTEMRRRRRNYMQLQYRRRRRDGELGDVPQGRQRR 1156


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 247 RYIPPHLRRQLQATSDQGRDSGSQNGEPERWNESEK 354
           RY+PP LR+Q Q    Q +    Q    ++  + ++
Sbjct: 296 RYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQR 331



 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 247 RYIPPHLRRQLQATSDQGRDSGSQNGEPERWNE 345
           RY+PP LR+Q Q      +    Q  + ++  E
Sbjct: 263 RYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGE 295



 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 247 RYIPPHLRRQLQATSDQ 297
           RY+PP LR+Q Q    Q
Sbjct: 450 RYVPPQLRQQRQQQQPQ 466


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 388 RVGPVRVHDHSISRIHSNALVRHSEIHCLDL 296
           R+  +++HD+ IS +   AL   +E+  LDL
Sbjct: 270 RLKMLKIHDNEISMVGDKALSGLNELQILDL 300


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 239 LLGAWGCKSRPASCCXRPVPFWLVTLXI 156
           ++G WG  S    CC +P   +   L +
Sbjct: 543 IIGKWGIISTAQKCCNKPCNIFQAVLSV 570


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,298
Number of Sequences: 2352
Number of extensions: 14335
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)