Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_L08
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2 p... 92 2e-18
BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 92 2e-18
AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 92 2e-18
AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase D... 92 2e-18
AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform pro... 92 2e-18
AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform pro... 92 2e-18
AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 92 2e-18
BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein. 87 8e-17
AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform pro... 87 8e-17
AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform pro... 87 8e-17
BC088362-1|AAH88362.1| 724|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 48 3e-05
BC047455-1|AAH47455.1| 690|Homo sapiens DDX4 protein protein. 48 3e-05
AY004154-1|AAF86585.1| 724|Homo sapiens DEAD box RNA helicase p... 48 3e-05
AL137462-1|CAB70750.1| 635|Homo sapiens hypothetical protein pr... 48 3e-05
AF262962-1|AAF72705.1| 724|Homo sapiens VASA protein protein. 48 3e-05
BX537565-1|CAD97783.1| 461|Homo sapiens hypothetical protein pr... 33 0.81
BC068556-1|AAH68556.1| 461|Homo sapiens solute carrier family 4... 33 0.81
BC060850-1|AAH60850.1| 463|Homo sapiens SLC46A3 protein protein. 33 0.81
BC036662-1|AAH36662.1| 461|Homo sapiens solute carrier family 4... 33 0.81
AL359454-3|CAM24029.1| 461|Homo sapiens novel protein protein. 33 0.81
AL359454-2|CAI17158.1| 463|Homo sapiens novel protein protein. 33 0.81
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 4.3
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 4.3
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 4.3
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 4.3
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 4.3
Y09615-1|CAA70830.1| 399|Homo sapiens mTERF protein. 30 7.6
BC130391-1|AAI30392.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
BC130389-1|AAI30390.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
BC108648-1|AAI08649.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
BC000965-1|AAH00965.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
AK222730-1|BAD96450.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
AC003086-1|AAB83941.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
>U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2
protein.
Length = 662
Score = 92.3 bits (219), Expect = 2e-18
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +1
Query: 238 STGRYIPPHLRRQLQATSDQGRDSG--SQNGEPERWNESEKWNXXXXXXXXXXXXXXXXX 411
S GRYIPPHLR + +DS S + + + ++ +
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSR 93
Query: 412 XXYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLF 591
++ R+D + R + ++ R + DE+DW+ PLP ER E LF
Sbjct: 94 GRFDDRG-RSD-YDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELF 151
Query: 592 GTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLARY 738
GNTGINF KY+DIPVEA G+ P I SF DV + ++ NI L RY
Sbjct: 152 SGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRY 200
>BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 92.3 bits (219), Expect = 2e-18
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +1
Query: 238 STGRYIPPHLRRQLQATSDQGRDSG--SQNGEPERWNESEKWNXXXXXXXXXXXXXXXXX 411
S GRYIPPHLR + +DS S + + + ++ +
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSR 93
Query: 412 XXYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLF 591
++ R+D + R + ++ R + DE+DW+ PLP ER E LF
Sbjct: 94 GRFDDRG-RSD-YDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELF 151
Query: 592 GTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLARY 738
GNTGINF KY+DIPVEA G+ P I SF DV + ++ NI L RY
Sbjct: 152 SGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRY 200
>AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 92.3 bits (219), Expect = 2e-18
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +1
Query: 238 STGRYIPPHLRRQLQATSDQGRDSG--SQNGEPERWNESEKWNXXXXXXXXXXXXXXXXX 411
S GRYIPPHLR + +DS S + + + ++ +
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSR 93
Query: 412 XXYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLF 591
++ R+D + R + ++ R + DE+DW+ PLP ER E LF
Sbjct: 94 GRFDDRG-RSD-YDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELF 151
Query: 592 GTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLARY 738
GNTGINF KY+DIPVEA G+ P I SF DV + ++ NI L RY
Sbjct: 152 SGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRY 200
>AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase DDX3
protein.
Length = 662
Score = 92.3 bits (219), Expect = 2e-18
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +1
Query: 238 STGRYIPPHLRRQLQATSDQGRDSG--SQNGEPERWNESEKWNXXXXXXXXXXXXXXXXX 411
S GRYIPPHLR + +DS S + + + ++ +
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSR 93
Query: 412 XXYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLF 591
++ R+D + R + ++ R + DE+DW+ PLP ER E LF
Sbjct: 94 GRFDDRG-RSD-YDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELF 151
Query: 592 GTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLARY 738
GNTGINF KY+DIPVEA G+ P I SF DV + ++ NI L RY
Sbjct: 152 SGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRY 200
>AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 92.3 bits (219), Expect = 2e-18
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +1
Query: 238 STGRYIPPHLRRQLQATSDQGRDSG--SQNGEPERWNESEKWNXXXXXXXXXXXXXXXXX 411
S GRYIPPHLR + +DS S + + + ++ +
Sbjct: 34 SKGRYIPPHLRNREATRGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSR 93
Query: 412 XXYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLF 591
++ R+D + R + ++ R + DE+DW+ PLP ER E LF
Sbjct: 94 GRFDDRG-RSD-YDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELF 151
Query: 592 GTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLARY 738
GNTGINF KY+DIPVEA G+ P I SF DV + ++ NI L RY
Sbjct: 152 SGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRY 200
>AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 92.3 bits (219), Expect = 2e-18
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +1
Query: 238 STGRYIPPHLRRQLQATSDQGRDSG--SQNGEPERWNESEKWNXXXXXXXXXXXXXXXXX 411
S GRYIPPHLR + +DS S + + + ++ +
Sbjct: 34 SKGRYIPPHLRNREATRGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSR 93
Query: 412 XXYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLF 591
++ R+D + R + ++ R + DE+DW+ PLP ER E LF
Sbjct: 94 GRFDDRG-RSD-YDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELF 151
Query: 592 GTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLARY 738
GNTGINF KY+DIPVEA G+ P I SF DV + ++ NI L RY
Sbjct: 152 SGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRY 200
>AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 3 variant protein.
Length = 674
Score = 92.3 bits (219), Expect = 2e-18
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +1
Query: 238 STGRYIPPHLRRQLQATSDQGRDSG--SQNGEPERWNESEKWNXXXXXXXXXXXXXXXXX 411
S GRYIPPHLR + +DS S + + + ++ +
Sbjct: 46 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSR 105
Query: 412 XXYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLF 591
++ R+D + R + ++ R + DE+DW+ PLP ER E LF
Sbjct: 106 GRFDDRG-RSD-YDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELF 163
Query: 592 GTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLARY 738
GNTGINF KY+DIPVEA G+ P I SF DV + ++ NI L RY
Sbjct: 164 SGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRY 212
>BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein.
Length = 660
Score = 86.6 bits (205), Expect = 8e-17
Identities = 58/173 (33%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Frame = +1
Query: 238 STGRYIPPHLRRQLQATSDQGRDSGSQNGEPERWNESEKWNXXXXXXXXXXXXXXXXXXX 417
S GRYIPPHLR + + +DS + ++ S +
Sbjct: 34 SKGRYIPPHLRNREASKGFHDKDSSGWSCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRG 93
Query: 418 YEPPAPRND------RWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQE 579
R+D R + R E +SRW V E+DW+ PLP ER E
Sbjct: 94 RFDDRGRSDYDGIGNRERPGFGRFERSGHSRWCDKSV--------EDDWSKPLPPSERLE 145
Query: 580 LLLFGTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLARY 738
LF GNTGINF KY+DIPVEA G P I +F D+++ ++ NI L RY
Sbjct: 146 QELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRY 198
>AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 86.6 bits (205), Expect = 8e-17
Identities = 58/173 (33%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Frame = +1
Query: 238 STGRYIPPHLRRQLQATSDQGRDSGSQNGEPERWNESEKWNXXXXXXXXXXXXXXXXXXX 417
S GRYIPPHLR + + +DS + ++ S +
Sbjct: 34 SKGRYIPPHLRNKEASKGFHDKDSSGWSCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRG 93
Query: 418 YEPPAPRND------RWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQE 579
R+D R + R E +SRW V E+DW+ PLP ER E
Sbjct: 94 RFDDRGRSDYDGIGNRERPGFGRFERSGHSRWCDKSV--------EDDWSKPLPPSERLE 145
Query: 580 LLLFGTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLARY 738
LF GNTGINF KY+DIPVEA G P I +F D+++ ++ NI L RY
Sbjct: 146 QELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRY 198
>AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 86.6 bits (205), Expect = 8e-17
Identities = 58/173 (33%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Frame = +1
Query: 238 STGRYIPPHLRRQLQATSDQGRDSGSQNGEPERWNESEKWNXXXXXXXXXXXXXXXXXXX 417
S GRYIPPHLR + + +DS + ++ S +
Sbjct: 34 SKGRYIPPHLRNKEASKGFHDKDSSGWSCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRG 93
Query: 418 YEPPAPRND------RWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQE 579
R+D R + R E +SRW V E+DW+ PLP ER E
Sbjct: 94 RFDDRGRSDYDGIGNRERPGFGRFERSGHSRWCDKSV--------EDDWSKPLPPSERLE 145
Query: 580 LLLFGTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLARY 738
LF GNTGINF KY+DIPVEA G P I +F D+++ ++ NI L RY
Sbjct: 146 QELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRY 198
>BC088362-1|AAH88362.1| 724|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 4 protein.
Length = 724
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +1
Query: 553 PLPRDERQELLLFGTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLA 732
P P DE +F TGINF KY+ I VE G P I +FE+ NL + NI+ A
Sbjct: 250 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKA 306
Query: 733 RY 738
Y
Sbjct: 307 GY 308
>BC047455-1|AAH47455.1| 690|Homo sapiens DDX4 protein protein.
Length = 690
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +1
Query: 553 PLPRDERQELLLFGTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLA 732
P P DE +F TGINF KY+ I VE G P I +FE+ NL + NI+ A
Sbjct: 216 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKA 272
Query: 733 RY 738
Y
Sbjct: 273 GY 274
>AY004154-1|AAF86585.1| 724|Homo sapiens DEAD box RNA helicase
protein.
Length = 724
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +1
Query: 553 PLPRDERQELLLFGTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLA 732
P P DE +F TGINF KY+ I VE G P I +FE+ NL + NI+ A
Sbjct: 250 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKA 306
Query: 733 RY 738
Y
Sbjct: 307 GY 308
>AL137462-1|CAB70750.1| 635|Homo sapiens hypothetical protein
protein.
Length = 635
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +1
Query: 553 PLPRDERQELLLFGTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLA 732
P P DE +F TGINF KY+ I VE G P I +FE+ NL + NI+ A
Sbjct: 161 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKA 217
Query: 733 RY 738
Y
Sbjct: 218 GY 219
>AF262962-1|AAF72705.1| 724|Homo sapiens VASA protein protein.
Length = 724
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +1
Query: 553 PLPRDERQELLLFGTGNTGINFSKYEDIPVEAXGDRVPXCITSFEDVNLTXLMRTNISLA 732
P P DE +F TGINF KY+ I VE G P I +FE+ NL + NI+ A
Sbjct: 250 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKA 306
Query: 733 RY 738
Y
Sbjct: 307 GY 308
>BX537565-1|CAD97783.1| 461|Homo sapiens hypothetical protein
protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 387 ASVPFAFTIIPFLGFIPTLWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 226
A VPF FTI+PF + ++ ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPF-SVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>BC068556-1|AAH68556.1| 461|Homo sapiens solute carrier family 46,
member 3 protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 387 ASVPFAFTIIPFLGFIPTLWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 226
A VPF FTI+PF + ++ ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPF-SVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>BC060850-1|AAH60850.1| 463|Homo sapiens SLC46A3 protein protein.
Length = 463
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 387 ASVPFAFTIIPFLGFIPTLWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 226
A VPF FTI+PF + ++ ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPF-SVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>BC036662-1|AAH36662.1| 461|Homo sapiens solute carrier family 46,
member 3 protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 387 ASVPFAFTIIPFLGFIPTLWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 226
A VPF FTI+PF + ++ ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPF-SVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>AL359454-3|CAM24029.1| 461|Homo sapiens novel protein protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 387 ASVPFAFTIIPFLGFIPTLWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 226
A VPF FTI+PF + ++ ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPF-SVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>AL359454-2|CAI17158.1| 463|Homo sapiens novel protein protein.
Length = 463
Score = 33.5 bits (73), Expect = 0.81
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 387 ASVPFAFTIIPFLGFIPTLWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 226
A VPF FTI+PF + ++ ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPF-SVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/103 (22%), Positives = 36/103 (34%)
Frame = +1
Query: 268 RRQLQATSDQGRDSGSQNGEPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDR 447
R+ Q++SD G S S++ P+R + + +PR R
Sbjct: 487 RQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRR 546
Query: 448 WKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQ 576
+ P P R S P+ RR R+ P P R+
Sbjct: 547 RRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRR 589
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/103 (22%), Positives = 36/103 (34%)
Frame = +1
Query: 268 RRQLQATSDQGRDSGSQNGEPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDR 447
R+ Q++SD G S S++ P+R + + +PR R
Sbjct: 487 RQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRR 546
Query: 448 WKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQ 576
+ P P R S P+ RR R+ P P R+
Sbjct: 547 RRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRR 589
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/103 (22%), Positives = 36/103 (34%)
Frame = +1
Query: 268 RRQLQATSDQGRDSGSQNGEPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDR 447
R+ Q++SD G S S++ P+R + + +PR R
Sbjct: 487 RQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRR 546
Query: 448 WKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQ 576
+ P P R S P+ RR R+ P P R+
Sbjct: 547 RRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRR 589
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/103 (22%), Positives = 36/103 (34%)
Frame = +1
Query: 268 RRQLQATSDQGRDSGSQNGEPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDR 447
R+ Q++SD G S S++ P+R + + +PR R
Sbjct: 485 RQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRR 544
Query: 448 WKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQ 576
+ P P R S P+ RR R+ P P R+
Sbjct: 545 RRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRR 587
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/103 (22%), Positives = 36/103 (34%)
Frame = +1
Query: 268 RRQLQATSDQGRDSGSQNGEPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDR 447
R+ Q++SD G S S++ P+R + + +PR R
Sbjct: 485 RQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRR 544
Query: 448 WKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQ 576
+ P P R S P+ RR R+ P P R+
Sbjct: 545 RRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRR 587
>Y09615-1|CAA70830.1| 399|Homo sapiens mTERF protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +2
Query: 404 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 580
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BC130391-1|AAI30392.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +2
Query: 404 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 580
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BC130389-1|AAI30390.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +2
Query: 404 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 580
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BC108648-1|AAI08649.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +2
Query: 404 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 580
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BC000965-1|AAH00965.1| 399|Homo sapiens mitochondrial
transcription termination factor, precursor protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +2
Query: 404 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 580
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>AK222730-1|BAD96450.1| 399|Homo sapiens mitochondrial
transcription termination factor precursor variant
protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +2
Query: 404 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 580
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>AC003086-1|AAB83941.1| 399|Homo sapiens mitochondrial
transcription terminator factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +2
Query: 404 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 580
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,965,200
Number of Sequences: 237096
Number of extensions: 2159920
Number of successful extensions: 4907
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4897
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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